Clone Name | bastl33e01 |
---|---|
Clone Library Name | barley_pub |
>gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, complete sequence Length = 233864 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 252 actccctccctctccctcttctc 274 ||||||||||||||||||||||| Sbjct: 80284 actccctccctctccctcttctc 80262
>gb|AC135671.3| Mus musculus BAC clone RP23-440D14 from chromosome 17, complete sequence Length = 188307 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttctc 274 |||||||||||||||||||||| Sbjct: 186010 ctccctccctctccctcttctc 186031
>gb|AC122536.4| Mus musculus BAC clone RP24-542K22 from chromosome 17, complete sequence Length = 150022 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttctc 274 |||||||||||||||||||||| Sbjct: 116786 ctccctccctctccctcttctc 116765
>emb|AL450321.15| Mouse DNA sequence from clone RP23-232M10 on chromosome 13 Contains a novel gene, a non-POU domain containing octamer-binding protein (Nono) pseudogene, a Sin3-associated polypeptide 18 (Sap18) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 209175 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 249 aaaactccctccctctccctct 270 |||||||||||||||||||||| Sbjct: 159584 aaaactccctccctctccctct 159605
>gb|AC154251.2| Mus musculus BAC clone RP24-196G20 from chromosome 16, complete sequence Length = 164980 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttctc 274 |||||||||||||||||||||| Sbjct: 45970 ctccctccctctccctcttctc 45991
>gb|AC109220.16| Mus musculus chromosome 7, clone RP23-84B11, complete sequence Length = 212018 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 ccctccctctccctcttctcaa 276 |||||||||||||||||||||| Sbjct: 51261 ccctccctctccctcttctcaa 51240
>emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on chromosome X, complete sequence Length = 166357 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttctc 274 |||||||||||||||||||||| Sbjct: 148324 ctccctccctctccctcttctc 148345
>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence Length = 206555 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttctc 274 |||||||||||||||||||||| Sbjct: 36626 ctccctccctctccctcttctc 36647
>gb|AC154385.2| Mus musculus BAC clone RP23-23O22 from chromosome 17, complete sequence Length = 221564 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttct 273 ||||||||||||||||||||| Sbjct: 125688 ctccctccctctccctcttct 125668
>gb|AC112866.5| Rattus norvegicus 1 BAC CH230-375M13 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 147079 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttct 273 ||||||||||||||||||||| Sbjct: 64265 ctccctccctctccctcttct 64285
>emb|AL157778.9| Human DNA sequence from clone RP11-485F13 on chromosome Xq21.2-22.2, complete sequence Length = 140757 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 actccctccctctccctcttc 272 ||||||||||||||||||||| Sbjct: 64533 actccctccctctccctcttc 64513
>ref|XM_775212.1| PREDICTED: Strongylocentrotus purpuratus similar to CG32019-PA, isoform A (LOC574816), mRNA Length = 13218 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 tccctctccctcttctcaacg 278 ||||||||||||||||||||| Sbjct: 9779 tccctctccctcttctcaacg 9759
>gb|AC087382.11| Homo sapiens chromosome 15, clone RP11-653J6, complete sequence Length = 227632 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttct 273 ||||||||||||||||||||| Sbjct: 139615 ctccctccctctccctcttct 139595
>gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, complete sequence Length = 177464 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttct 273 ||||||||||||||||||||| Sbjct: 93525 ctccctccctctccctcttct 93505
>emb|AL845164.5| Mouse DNA sequence from clone RP23-286G12 on chromosome 2, complete sequence Length = 115921 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 aaactccctccctctccctct 270 ||||||||||||||||||||| Sbjct: 29646 aaactccctccctctccctct 29666
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 138388 ctccctccctctccctcttc 138407
>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence Length = 191726 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 53380 ctccctccctctccctcttc 53361
>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence Length = 178437 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 158719 ctccctccctctccctcttc 158700
>gb|AC166815.6| Mus musculus chromosome 18, clone RP23-373L14, complete sequence Length = 137949 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 55111 ctccctccctctccctcttc 55130
>gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, complete sequence Length = 162232 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 107153 ctccctccctctccctcttc 107172
>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence Length = 210808 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 205067 ctccctccctctccctcttc 205086 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 205041 ctccctccctctccctcttc 205060 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 205015 ctccctccctctccctcttc 205034
>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence Length = 194548 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 aaaactccctccctctccctcttc 272 ||||||||||||||||||| |||| Sbjct: 142487 aaaactccctccctctcccccttc 142510
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 87567 ctccctccctctccctcttc 87548
>gb|AC146390.4| Pan troglodytes BAC clone RP43-145D14 from 7, complete sequence Length = 116302 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 agaaaactccctccctctcc 266 |||||||||||||||||||| Sbjct: 44339 agaaaactccctccctctcc 44320
>gb|AC134831.3| Mus musculus BAC clone RP24-500P4 from chromosome 18, complete sequence Length = 188380 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 138798 ctccctccctctccctcttc 138817
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 233612 ctccctccctctccctcttc 233631
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 32656340 ctccctccctctccctcttc 32656359
>gb|AC163687.5| Mus musculus BAC clone RP23-3H13 from chromosome 17, complete sequence Length = 220643 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 65965 ctccctccctctccctcttc 65946
>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence Length = 193216 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 190105 ctccctccctctccctcttc 190124
>gb|AC182749.2| Mus musculus BAC clone RP23-464D14 from chromosome 17, complete sequence Length = 211198 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 206726 ctccctccctctccctcttc 206707
>gb|AC123797.3| Mus musculus BAC clone RP24-326O4 from chromosome 9, complete sequence Length = 135119 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 78121 ctccctccctctccctcttc 78140
>gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, complete sequence Length = 178844 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 38613 ctccctccctctccctcttc 38632
>gb|AC163993.3| Mus musculus chromosome 19, clone RP24-78O14, complete sequence Length = 177411 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 aaaactccctccctctccctcttc 272 ||||||||||||||||||| |||| Sbjct: 61716 aaaactccctccctctcccccttc 61693
>emb|CR339059.15| Zebrafish DNA sequence from clone CH211-121I18 in linkage group 3, complete sequence Length = 154299 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 113613 ctccctccctctccctcttc 113632
>emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in linkage group 9, complete sequence Length = 221511 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 62714 ctccctccctctccctcttc 62733
>gb|AC044798.7| Homo sapiens chromosome 16 clone RP11-22D3, complete sequence Length = 165651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 tccctccctctccctcttct 273 |||||||||||||||||||| Sbjct: 115605 tccctccctctccctcttct 115586
>gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 217690 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 62310 ctccctccctctccctcttc 62291
>emb|AL161936.15| Human DNA sequence from clone RP11-48B24 on chromosome 10 Contains the 3' end of the WAC gene for WW domain-containing adapter with a coiled-coil region (PRO1741, FLJ31290, KIAA1844, MGC10753), a CGI-121 protein (CGI-121) pseudogene, the NMA gene for novel protein and two CpG islands, complete sequence Length = 155584 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 145987 ctccctccctctccctcttc 146006
>gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, complete sequence Length = 202205 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 109340 ctccctccctctccctcttc 109321 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 109314 ctccctccctctccctcttc 109295 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 109288 ctccctccctctccctcttc 109269
>gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Hospital Oakland Research Institute) complete sequence Length = 242500 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 114052 ctccctccctctccctcttc 114071
>emb|BX548038.9| Zebrafish DNA sequence from clone DKEY-219C10 in linkage group 9, complete sequence Length = 173526 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 5919 ctccctccctctccctcttc 5938
>emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in linkage group 21, complete sequence Length = 180154 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 115515 ctccctccctctccctcttc 115534
>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5' end of the gene for a novel protein (9330163N21Rik), a ribosomal protein S2 (Rps2) pseudogene, the gene for a novel protein (E130018012Rik), the gene for a novel protein (6820428D13Rik), the Mrpl27 gene for mitochondrial ribosomal protein L27, the Xylt2 gene for xylosyltransferase II, a novel gene (5330426M11Rik), the gene for a novel protein (C230057C09Rik), the gene for a novel protein similar to Cdc34 and two pseudogenes similar to hypothetical protein Tr:Q8C517, complete sequence Length = 203262 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 101990 ctccctccctctccctcttc 102009
>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete sequence Length = 209583 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 81920 ctccctccctctccctcttc 81939
>emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in linkage group 2, complete sequence Length = 249584 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 177104 ctccctccctctccctcttc 177085
>emb|BX571668.20| Zebrafish DNA sequence from clone DKEY-47M8 in linkage group 10, complete sequence Length = 242710 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 104284 ctccctccctctccctcttc 104303
>gb|AF351386.1| Gossypium hirsutum clone JESPR148 microsatellite sequence Length = 312 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tgccaaattcggatgtcaaa 156 |||||||||||||||||||| Sbjct: 255 tgccaaattcggatgtcaaa 274
>gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosome 9, complete sequence Length = 139613 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 5233 ctccctccctctccctcttc 5214
>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198476 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 148698 ctccctccctctccctcttc 148717
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aaactccctccctctccctc 269 |||||||||||||||||||| Sbjct: 637274 aaactccctccctctccctc 637293
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccctccctctccctcttctc 274 |||||||||||||||||||| Sbjct: 12285990 ccctccctctccctcttctc 12286009
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 32746850 ctccctccctctccctcttc 32746869
>gb|AC010132.5|AC010132 Homo sapiens BAC clone RP11-111K18 from 7p11.2-p2, complete sequence Length = 166680 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 78244 ctccctccctctccctcttc 78263
>gb|AC092408.3| Papio anubis clone RP41-446H8, complete sequence Length = 184036 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 agaaaactccctccctctcc 266 |||||||||||||||||||| Sbjct: 52134 agaaaactccctccctctcc 52115
>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence Length = 230020 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 70464 ctccctccctctccctcttc 70483
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccctccctctccctcttctc 274 |||||||||||||||||||| Sbjct: 69544 ccctccctctccctcttctc 69563
>emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chromosome X, complete sequence Length = 141997 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 120264 ctccctccctctccctcttc 120245
>emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chromosome X, complete sequence Length = 199101 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 58127 ctccctccctctccctcttc 58108
>gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, complete sequence Length = 160247 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 67231 ctccctccctctccctcttc 67250
>gb|AC154288.2| Mus musculus BAC clone RP23-447G10 from 17, complete sequence Length = 195195 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 145223 ctccctccctctccctcttc 145204
>emb|CR354606.12| Zebrafish DNA sequence from clone CH211-252L23 in linkage group 18, complete sequence Length = 138838 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 81203 ctccctccctctccctcttc 81222
>emb|CR388132.9| Zebrafish DNA sequence from clone DKEY-23A23 in linkage group 4, complete sequence Length = 206525 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 47344 ctccctccctctccctcttc 47363
>gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 85724 ctccctccctctccctcttc 85705
>gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, complete sequence Length = 136996 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 81134 ctccctccctctccctcttc 81115
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aaactccctccctctccctc 269 |||||||||||||||||||| Sbjct: 637274 aaactccctccctctccctc 637293
>gb|AC161148.7| Mus musculus BAC clone RP23-358L5 from chromosome 1, complete sequence Length = 181120 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 56548 ctccctccctctccctcttc 56567
>emb|AL954349.10| Mouse DNA sequence from clone RP24-408O24 on chromosome 4, complete sequence Length = 20892 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 12189 ctccctccctctccctcttc 12208
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 aaactccctccctctccctc 269 |||||||||||||||||||| Sbjct: 105698 aaactccctccctctccctc 105679
>emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chromosome 17, complete sequence Length = 226188 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 35126 ctccctccctctccctcttc 35145
>emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on chromosome 9, complete sequence Length = 162839 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 acaggttcctccccagcccc 55 |||||||||||||||||||| Sbjct: 154931 acaggttcctccccagcccc 154912
>gb|AC122223.4| Mus musculus BAC clone RP23-130K20 from 1, complete sequence Length = 233830 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 177613 ctccctccctctccctcttc 177632
>emb|AL929110.10| Mouse DNA sequence from clone RP23-275P20 on chromosome 2, complete sequence Length = 186386 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 atagaaaactccctccctctccctcttc 272 ||||| ||||||||||||||| |||||| Sbjct: 46587 atagagaactccctccctctctctcttc 46614
>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence Length = 155999 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 85999 ctccctccctctccctcttc 85980
>gb|AY285165.1| Sus scrofa clone UMNp1000.gcg microsatellite sequence Length = 730 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 actccctccctctccctctt 271 |||||||||||||||||||| Sbjct: 70 actccctccctctccctctt 89
>emb|AL607086.19| Mouse DNA sequence from clone RP23-269B7 on chromosome 4, complete sequence Length = 193830 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccctccctctccctcttctc 274 |||||||||||||||||||| Sbjct: 92741 ccctccctctccctcttctc 92722
>emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chromosome 11, complete sequence Length = 242502 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccctccctctccctcttctc 274 |||||||||||||||||||| Sbjct: 186807 ccctccctctccctcttctc 186826
>emb|AL807397.6| Mouse DNA sequence from clone RP23-176N13 on chromosome 4, complete sequence Length = 193939 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ctccctccctctccctcttc 272 |||||||||||||||||||| Sbjct: 29721 ctccctccctctccctcttc 29740
>dbj|AB065601.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_164 Length = 18512 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 acaggttcctccccagcccc 55 |||||||||||||||||||| Sbjct: 15728 acaggttcctccccagcccc 15709 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,760,981 Number of Sequences: 3902068 Number of extensions: 2760981 Number of successful extensions: 156648 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 156071 Number of HSP's gapped (non-prelim): 577 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)