>LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7.12.1)|
          Length = 575

 Score = 35.4 bits (80), Expect = 0.063
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
 Frame = -2

Query: 250 NQDLLDHSHHPP-------SPQKVIQGHQLSLSPSHVLNSQKR**NLSHQSLNLHPPPLL 92
           NQ    HSHHPP       S Q V++   +   PSH         NL HQ ++   PP++
Sbjct: 14  NQSPFPHSHHPPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLPHQPIS--KPPVI 71

Query: 91  MTLPRDQTH 65
             LP+ Q H
Sbjct: 72  PNLPKLQVH 80

>MMP9_CANFA (O18733) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 704

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 410 GRTGAPSKSLVRPPTLGPDETSSLPQD 330
           G TG P+     PPT GP E  ++P D
Sbjct: 481 GPTGPPAAGPTGPPTAGPSEAPTVPVD 507

>YJI2_YEAST (P47031) Hypothetical 82.5 kDa protein in EXO70-ARP4 intergenic|
           region
          Length = 731

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +2

Query: 203 LLRTRRMMTMIQKVLIQIKISKRSKMSQT 289
           LL+ RR  TM+Q +++ +K ++RSK S +
Sbjct: 157 LLKLRRAYTMLQDIMVTVKKAERSKNSSS 185

>MMP9_RAT (P50282) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 708

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = -1

Query: 413 VGRTGAPSKSLVRPPTLGPDET---SSLPQD 330
           V  TGAPS     PPT GP E    SS P D
Sbjct: 486 VAPTGAPSPGPTGPPTAGPSEAPTESSTPDD 516


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.133    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,980,697
Number of Sequences: 219361
Number of extensions: 776024
Number of successful extensions: 1607
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)