ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X67561.1|ZMHOX1A Z.mays Zmhox1a mRNA for homeobox protein 117 3e-23
2emb|AJ238507.1|ZMA238507 Zea mays hox1a and trap genes 117 3e-23
3gb|AY109339.1| Zea mays CL1479_1 mRNA sequence 117 3e-23
4emb|X92428.1|ZMHOX1BGN Z.mays mRNA for Hox1b protein 109 8e-21
5emb|X89761.1|ZMHOX2BGN Z.mays mRNA for homeobox 2b protein 70 7e-09
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
7dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
8dbj|AB081341.1| Oryza sativa (japonica cultivar-group) HAZ1 gene... 68 3e-08
9dbj|AB081340.1| Oryza sativa (japonica cultivar-group) HAZ1 mRNA... 68 3e-08
10dbj|AK121314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
11dbj|AK101428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
13dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
14gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, com... 46 0.097
15gb|AC040980.14| Homo sapiens chromosome 17, clone RP11-685I11, c... 46 0.097
16gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, comp... 44 0.38
17emb|BX005454.5| Zebrafish DNA sequence from clone CH211-177N13 i... 44 0.38
18gb|AC166248.20| Mus musculus BAC RP23-311A8 (Roswell Park Cance... 42 1.5
19ref|XM_363635.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.5
20dbj|AK141714.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 42 1.5
21gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Canc... 42 1.5
22emb|Z78059.1|CEC34B4 Caenorhabditis elegans Cosmid C34B4, comple... 42 1.5
23gb|AC132443.3| Mus musculus BAC clone RP23-157C23 from 6, comple... 42 1.5
24gb|AC166252.18| Mus musculus 6 BAC RP23-100G10 (Roswell Park Can... 42 1.5
25gb|AC144795.5| Mus musculus BAC clone RP24-374I3 from chromosome... 42 1.5
26ref|NM_112838.2| Arabidopsis thaliana transcription factor AT3G1... 40 6.0
27ref|NM_120129.2| Arabidopsis thaliana DNA binding AT4G39680 mRNA... 40 6.0
28ref|XM_517957.1| PREDICTED: Pan troglodytes similar to chromosom... 40 6.0
29gb|AC109149.15| Mus musculus chromosome 19, clone RP24-178F17, c... 40 6.0
30gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, compl... 40 6.0
31ref|XM_419609.1| PREDICTED: Gallus gallus similar to FGFR1 oncog... 40 6.0
32gb|BC044528.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptid... 40 6.0
33gb|AC146084.2| Pan troglodytes BAC clone RP43-56L21 from 7, comp... 40 6.0
34gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete se... 40 6.0
35gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, c... 40 6.0
36gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, comple... 40 6.0
37gb|AC004879.2| Homo sapiens PAC clone RP4-755G17 from 7, complet... 40 6.0
38gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Can... 40 6.0
39ref|NM_016606.2| Homo sapiens receptor accessory protein 2 (REEP... 40 6.0
40emb|Z95328.1|HS447B16 Human DNA sequence from clone RP3-447B16 o... 40 6.0
41gb|BC006218.2| Homo sapiens receptor accessory protein 2, mRNA (... 40 6.0
42emb|Z83313.1|HS106C24 Human DNA sequence from clone RP1-106C24 o... 40 6.0
43emb|AL627250.8| Human DNA sequence from clone RP13-222H17 on chr... 40 6.0
44gb|AC090122.26| Mus musculus strain C57BL/6J clone rp23-28a7 map... 40 6.0
45gb|AC005392.2| Homo sapiens chromosome 19 clone CTC-490G23, comp... 40 6.0
46emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complete seq... 40 6.0
47emb|X69512.1|ATHAT31A A.thaliana HAT3.1 mRNA 40 6.0
48gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, c... 40 6.0
49emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, ... 40 6.0
50emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, B... 40 6.0
51emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, B... 40 6.0
52emb|AJ296304.1|MMU296304 Mus musculus lmo1 gene for putative hum... 40 6.0
53gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, c... 40 6.0
54gb|AC024077.2| Homo sapiens chromosome 19 clone LLNL-F_204C10, c... 40 6.0
55gb|AC183545.2| Pan troglodytes BAC clone CH251-233G24 from chrom... 40 6.0
56emb|CR609366.1| full-length cDNA clone CS0DN001YG10 of Adult bra... 40 6.0
57dbj|AK056193.1| Homo sapiens cDNA FLJ31631 fis, clone NT2RI20033... 40 6.0
58gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, compl... 40 6.0
59gb|AC091894.2| Homo sapiens chromosome 5 clone RP11-138J23, comp... 40 6.0
60gb|AC004821.3| Homo sapiens chromosome 5 clone RP1-98O22, comple... 40 6.0
61ref|XM_678241.1| PREDICTED: Danio rerio similar to DEAD (Asp-Glu... 40 6.0
62gb|AC111001.4| Homo sapiens BAC clone RP13-933J18 from 4, comple... 40 6.0
63emb|BX826433.1|CNS0A4A6 Arabidopsis thaliana Full-length cDNA Co... 40 6.0
64gb|AF251041.1|AF251041 Homo sapiens SGC32445 protein (SGC32445) ... 40 6.0
65gb|AC112232.5| Homo sapiens BAC clone RP11-166K6 from 4, complet... 40 6.0
66gb|AC156276.6| Mus musculus 10 BAC RP24-323L12 (Roswell Park Can... 40 6.0
67gb|AC112969.12| Mus musculus chromosome 8, clone RP24-331K7, com... 40 6.0
68dbj|AK223611.1| Homo sapiens mRNA for receptor expression enhanc... 40 6.0
69gb|BT005965.1| Arabidopsis thaliana At3g19510 gene, complete cds 40 6.0
70gb|AC019060.5|AC019060 Homo sapiens BAC clone RP11-125K5 from Y,... 40 6.0
71gb|AC113403.4| Homo sapiens chromosome 5 clone RP11-461O14, comp... 40 6.0
72gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone ... 40 6.0
73emb|AL954678.8| Zebrafish DNA sequence from clone CH211-207E14 i... 40 6.0
74dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.0
75dbj|AK117105.1| Arabidopsis thaliana At3g19510 mRNA for putative... 40 6.0
76emb|X73354.1|RSVGPE Respiratory syncytial virus (642) gene for G... 40 6.0
77gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, comp... 40 6.0
78gb|AF065408.1|AF065408 Human respiratory syncytial virus strain ... 40 6.0
79emb|AL929510.17| Mouse DNA sequence from clone RP23-241O13 on ch... 40 6.0
80gb|AC005791.1|AC005791 Homo sapiens chromosome 19, cosmid R26371... 40 6.0
81gb|AF070551.1|AF070551 Homo sapiens clone 24515 mRNA sequence 40 6.0
82gb|AC004384.1|AC004384 Human Chromosome X clone bWXD531, complet... 40 6.0
83gb|AC004385.1|AC004385 Human Chromosome X clone bWXD547, complet... 40 6.0
84gb|AC147221.4| Mus musculus BAC clone RP23-58K20 from 7, complet... 40 6.0
85gb|AC138313.4| Mus musculus BAC clone RP23-243P9 from 9, complet... 40 6.0
86ref|NM_201045.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypept... 40 6.0 
>emb|X67561.1|ZMHOX1A Z.mays Zmhox1a mRNA for homeobox protein
          Length = 2873

 Score =  117 bits (59), Expect = 3e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                        
Query: 179  agaaagttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccag 238
            |||| |||||||||||  ||||||||||||| || || ||||||||||||||||||||||
Sbjct: 1354 agaaggttgatgacctcagattaccttctgaagattcagaggatgatgactatgatccag 1413

                                               
Query: 239  aaggtcctgattcagataaagatatcgaagagaag 273
             |||||||||||||||||||||| ||||| |||||
Sbjct: 1414 caggtcctgattcagataaagatgtcgaaaagaag 1448



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                        
Query: 6    tgatcttccatcagacgattcagaagacgatgacttcggccccaatatatctgaagaaca 65
            ||||||||||||||| || ||||| ||| ||||||| | |||||||||  ||||||| ||
Sbjct: 1184 tgatcttccatcagatgactcagacgacaatgactttgaccccaatatgcctgaagagca 1243

                                                                        
Query: 66   tgtgtctggtcacgtggaagggtcatcagaagaggagggggatgaaggttcagactctga 125
            ||||  |||| | |  ||||  || || |||||||| | ||||| ||| |||||||||||
Sbjct: 1244 tgtggttggtaaggatgaagaatcgtctgaagaggatgaggatggaggatcagactctga 1303

                   
Query: 126  tgactca 132
            |||||||
Sbjct: 1304 tgactca 1310
to top
>emb|AJ238507.1|ZMA238507 Zea mays hox1a and trap genes
          Length = 22927

 Score =  117 bits (59), Expect = 3e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                         
Query: 179   agaaagttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccag 238
             |||| |||||||||||  ||||||||||||| || || ||||||||||||||||||||||
Sbjct: 14787 agaaggttgatgacctcagattaccttctgaagattcagaggatgatgactatgatccag 14846

                                                
Query: 239   aaggtcctgattcagataaagatatcgaagagaag 273
              |||||||||||||||||||||| ||||| |||||
Sbjct: 14847 caggtcctgattcagataaagatgtcgaaaagaag 14881



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                         
Query: 6     tgatcttccatcagacgattcagaagacgatgacttcggccccaatatatctgaagaaca 65
             ||||||||||||||| || ||||| ||| ||||||| | |||||||||  ||||||| ||
Sbjct: 14617 tgatcttccatcagatgactcagacgacaatgactttgaccccaatatgcctgaagagca 14676

                                                                         
Query: 66    tgtgtctggtcacgtggaagggtcatcagaagaggagggggatgaaggttcagactctga 125
             ||||  |||| | |  ||||  || || |||||||| | ||||| ||| |||||||||||
Sbjct: 14677 tgtggttggtaaggatgaagaatcgtctgaagaggatgaggatggaggatcagactctga 14736

                    
Query: 126   tgactca 132
             |||||||
Sbjct: 14737 tgactca 14743
to top
>gb|AY109339.1| Zea mays CL1479_1 mRNA sequence
          Length = 3315

 Score =  117 bits (59), Expect = 3e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                        
Query: 179  agaaagttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccag 238
            |||| |||||||||||  ||||||||||||| || || ||||||||||||||||||||||
Sbjct: 1821 agaaggttgatgacctcagattaccttctgaagattcagaggatgatgactatgatccag 1880

                                               
Query: 239  aaggtcctgattcagataaagatatcgaagagaag 273
             |||||||||||||||||||||| ||||| |||||
Sbjct: 1881 caggtcctgattcagataaagatgtcgaaaagaag 1915



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                        
Query: 6    tgatcttccatcagacgattcagaagacgatgacttcggccccaatatatctgaagaaca 65
            ||||||||||||||| || ||||| ||| ||||||| | |||||||||  ||||||| ||
Sbjct: 1651 tgatcttccatcagatgactcagacgacaatgactttgaccccaatatgcctgaagagca 1710

                
Query: 66   tgtg 69
            ||||
Sbjct: 1711 tgtg 1714
to top
>emb|X92428.1|ZMHOX1BGN Z.mays mRNA for Hox1b protein
          Length = 2790

 Score =  109 bits (55), Expect = 8e-21
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                        
Query: 179  agaaagttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccag 238
            |||| ||||||||||| |||||| ||||||| || || ||||||||||||||||||||||
Sbjct: 1227 agaaggttgatgacctgggattatcttctgaagattcagaggatgatgactatgatccag 1286

                                               
Query: 239  aaggtcctgattcagataaagatatcgaagagaag 273
             |||||||||||| ||||||||| ||||| |||||
Sbjct: 1287 caggtcctgattcggataaagatgtcgaaaagaag 1321
to top
>emb|X89761.1|ZMHOX2BGN Z.mays mRNA for homeobox 2b protein
          Length = 4964

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                        
Query: 280  gagtcagacttcacatcggactctgatgatttctgtgttgagattacgaagtcttgtggt 339
            |||||||| |||||||| |||||||||||||| |||| ||||||| | || |||||||| 
Sbjct: 2029 gagtcagatttcacatcagactctgatgatttttgtgctgagattgccaaatcttgtggc 2088

                       
Query: 340  aaggatgaagt 350
             ||||||||||
Sbjct: 2089 caggatgaagt 2099
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                           
Query: 183     agttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccagaagg 242
               ||||||||| ||||| || ||||||||||| || ||||||| ||||| |||||||| |||
Sbjct: 6740327 agttgatgatcttggtttgccttctgaggattcagaggatggtgactttgatccagcagg 6740386

                                 
Query: 243     tcctgattcagataaaga 260
               ||| ||||| || |||||
Sbjct: 6740387 tccagattccgacaaaga 6740404



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                           
Query: 276     agatgagtcagacttcacatcggactctgatgatttctgtgttgagattacgaagtcttg 335
               |||||| ||||| || ||||| |||||||||||||| |||| ||||||| | || || ||
Sbjct: 6740435 agatgaatcagattttacatctgactctgatgatttttgtgctgagattgctaaatcctg 6740494

                            
Query: 336     tggtaaggatgaa 348
               |||| ||||||||
Sbjct: 6740495 tggtcaggatgaa 6740507



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 7       gatcttccatcagacgattcagaagacgatga 38
               |||||||||||||| ||||||| |||| ||||
Sbjct: 6740142 gatcttccatcagatgattcagcagacaatga 6740173
to top
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0525F01
          Length = 151668

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                         
Query: 183   agttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccagaagg 242
             ||||||||| ||||| || ||||||||||| || ||||||| ||||| |||||||| |||
Sbjct: 70006 agttgatgatcttggtttgccttctgaggattcagaggatggtgactttgatccagcagg 70065

                               
Query: 243   tcctgattcagataaaga 260
             ||| ||||| || |||||
Sbjct: 70066 tccagattccgacaaaga 70083



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 276   agatgagtcagacttcacatcggactctgatgatttctgtgttgagattacgaagtcttg 335
             |||||| ||||| || ||||| |||||||||||||| |||| ||||||| | || || ||
Sbjct: 70114 agatgaatcagattttacatctgactctgatgatttttgtgctgagattgctaaatcctg 70173

                          
Query: 336   tggtaaggatgaa 348
             |||| ||||||||
Sbjct: 70174 tggtcaggatgaa 70186



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 7     gatcttccatcagacgattcagaagacgatga 38
             |||||||||||||| ||||||| |||| ||||
Sbjct: 69821 gatcttccatcagatgattcagcagacaatga 69852
to top
>dbj|AB081341.1| Oryza sativa (japonica cultivar-group) HAZ1 gene for PHD-finger
            family homeodomain protein, partial cds
          Length = 5791

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                        
Query: 183  agttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccagaagg 242
            ||||||||| ||||| || ||||||||||| || ||||||| ||||| |||||||| |||
Sbjct: 1703 agttgatgatcttggtttgccttctgaggattcagaggatggtgactttgatccagcagg 1762

                              
Query: 243  tcctgattcagataaaga 260
            ||| ||||| || |||||
Sbjct: 1763 tccagattccgacaaaga 1780



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 276  agatgagtcagacttcacatcggactctgatgatttctgtgttgagattacgaagtcttg 335
            |||||| ||||| || ||||| |||||||||||||| |||| ||||||| | || || ||
Sbjct: 1811 agatgaatcagattttacatctgactctgatgatttttgtgctgagattgctaaatcctg 1870

                         
Query: 336  tggtaaggatgaa 348
            |||| ||||||||
Sbjct: 1871 tggtcaggatgaa 1883



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 7    gatcttccatcagacgattcagaagacgatga 38
            |||||||||||||| ||||||| |||| ||||
Sbjct: 1518 gatcttccatcagatgattcagcagacaatga 1549
to top
>dbj|AB081340.1| Oryza sativa (japonica cultivar-group) HAZ1 mRNA for PHD-finger
            family homeodomain protein, complete cds
          Length = 2997

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                        
Query: 183  agttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccagaagg 242
            ||||||||| ||||| || ||||||||||| || ||||||| ||||| |||||||| |||
Sbjct: 1313 agttgatgatcttggtttgccttctgaggattcagaggatggtgactttgatccagcagg 1372

                              
Query: 243  tcctgattcagataaaga 260
            ||| ||||| || |||||
Sbjct: 1373 tccagattccgacaaaga 1390



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 276  agatgagtcagacttcacatcggactctgatgatttctgtgttgagattacgaagtcttg 335
            |||||| ||||| || ||||| |||||||||||||| |||| ||||||| | || || ||
Sbjct: 1421 agatgaatcagattttacatctgactctgatgatttttgtgctgagattgctaaatcctg 1480

                         
Query: 336  tggtaaggatgaa 348
            |||| ||||||||
Sbjct: 1481 tggtcaggatgaa 1493



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 7    gatcttccatcagacgattcagaagacgatga 38
            |||||||||||||| ||||||| |||| ||||
Sbjct: 1128 gatcttccatcagatgattcagcagacaatga 1159
to top
>dbj|AK121314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113A13, full
            insert sequence
          Length = 3259

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                        
Query: 183  agttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccagaagg 242
            ||||||||| ||||| || ||||||||||| || ||||||| ||||| |||||||| |||
Sbjct: 1621 agttgatgatcttggtttgccttctgaggattcagaggatggtgactttgatccagcagg 1680

                              
Query: 243  tcctgattcagataaaga 260
            ||| ||||| || |||||
Sbjct: 1681 tccagattccgacaaaga 1698



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 276  agatgagtcagacttcacatcggactctgatgatttctgtgttgagattacgaagtcttg 335
            |||||| ||||| || ||||| |||||||||||||| |||| ||||||| | || || ||
Sbjct: 1729 agatgaatcagattttacatctgactctgatgatttttgtgctgagattgctaaatcctg 1788

                         
Query: 336  tggtaaggatgaa 348
            |||| ||||||||
Sbjct: 1789 tggtcaggatgaa 1801



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 7    gatcttccatcagacgattcagaagacgatga 38
            |||||||||||||| ||||||| |||| ||||
Sbjct: 1436 gatcttccatcagatgattcagcagacaatga 1467
to top
>dbj|AK101428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038H23, full
            insert sequence
          Length = 3284

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                        
Query: 183  agttgatgaccttggattaccttctgaggactcggaggatgatgactatgatccagaagg 242
            ||||||||| ||||| || ||||||||||| || ||||||| ||||| |||||||| |||
Sbjct: 1619 agttgatgatcttggtttgccttctgaggattcagaggatggtgactttgatccagcagg 1678

                              
Query: 243  tcctgattcagataaaga 260
            ||| ||||| || |||||
Sbjct: 1679 tccagattccgacaaaga 1696



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 276  agatgagtcagacttcacatcggactctgatgatttctgtgttgagattacgaagtcttg 335
            |||||| ||||| || ||||| |||||||||||||| |||| ||||||| | || || ||
Sbjct: 1727 agatgaatcagattttacatctgactctgatgatttttgtgctgagattgctaaatcctg 1786

                         
Query: 336  tggtaaggatgaa 348
            |||| ||||||||
Sbjct: 1787 tggtcaggatgaa 1799



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 7    gatcttccatcagacgattcagaagacgatga 38
            |||||||||||||| ||||||| |||| ||||
Sbjct: 1434 gatcttccatcagatgattcagcagacaatga 1465
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 276      agatgagtcagacttcacatcggactctgatgatttctgtg 316
                |||||| ||||||||||| || |||||||||||||| ||||
Sbjct: 31310098 agatgaatcagacttcacctctgactctgatgatttttgtg 31310058
to top
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0481E12
          Length = 161563

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 276   agatgagtcagacttcacatcggactctgatgatttctgtg 316
             |||||| ||||||||||| || |||||||||||||| ||||
Sbjct: 64381 agatgaatcagacttcacctctgactctgatgatttttgtg 64341
to top
>gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, complete sequence
          Length = 203765

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 97   gaggagggggatgaaggttcaga 119
            |||||||||||||||||||||||
Sbjct: 5821 gaggagggggatgaaggttcaga 5799
to top
>gb|AC040980.14| Homo sapiens chromosome 17, clone RP11-685I11, complete sequence
          Length = 139484

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 97     gaggagggggatgaaggttcaga 119
              |||||||||||||||||||||||
Sbjct: 125951 gaggagggggatgaaggttcaga 125929
to top
>gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, complete sequence
          Length = 230898

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 127    gactcaaatttcatcacctctt 148
              ||||||||||||||||||||||
Sbjct: 180973 gactcaaatttcatcacctctt 180994
to top
>emb|BX005454.5| Zebrafish DNA sequence from clone CH211-177N13 in linkage group 14,
             complete sequence
          Length = 63109

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 149   ctgagaattcagaacatgtgaa 170
             ||||||||||||||||||||||
Sbjct: 40804 ctgagaattcagaacatgtgaa 40783
to top
>gb|AC166248.20| Mus musculus  BAC RP23-311A8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 182636

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 246   tgattcagataaagatatcgaagagaagc 274
             ||||||||||||||||||| |||| ||||
Sbjct: 77384 tgattcagataaagatatcaaagaaaagc 77412
to top
>ref|XM_363635.1| Magnaporthe grisea 70-15 hypothetical protein (MG01561.4) partial
           mRNA
          Length = 1215

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 14  catcagacgattcagaagacgatga 38
           ||||||||||||| |||||||||||
Sbjct: 764 catcagacgattcggaagacgatga 788
to top
>dbj|AK141714.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030040A21 product:hypothetical
            protein, full insert sequence
          Length = 2339

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 246  tgattcagataaagatatcgaagagaagc 274
            ||||||||||||||||||| |||| ||||
Sbjct: 1213 tgattcagataaagatatcaaagaaaagc 1185
to top
>gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205164

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 145   tcttctgagaattcagaacat 165
             |||||||||||||||||||||
Sbjct: 46684 tcttctgagaattcagaacat 46704
to top
>emb|Z78059.1|CEC34B4 Caenorhabditis elegans Cosmid C34B4, complete sequence
          Length = 42042

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   attcagaacatgtgaaggaga 175
             |||||||||||||||||||||
Sbjct: 21665 attcagaacatgtgaaggaga 21685
to top
>gb|AC132443.3| Mus musculus BAC clone RP23-157C23 from 6, complete sequence
          Length = 179231

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   tcttctgagaattcagaacat 165
             |||||||||||||||||||||
Sbjct: 18070 tcttctgagaattcagaacat 18050
to top
>gb|AC166252.18| Mus musculus 6 BAC RP23-100G10 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 149884

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 246   tgattcagataaagatatcgaagagaagc 274
             ||||||||||||||||||| |||| ||||
Sbjct: 92253 tgattcagataaagatatcaaagaaaagc 92281
to top
>gb|AC144795.5| Mus musculus BAC clone RP24-374I3 from chromosome 6, complete sequence
          Length = 184775

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 246    tgattcagataaagatatcgaagagaagc 274
              ||||||||||||||||||| |||| ||||
Sbjct: 112365 tgattcagataaagatatcaaagaaaagc 112337
to top
>ref|NM_112838.2| Arabidopsis thaliana transcription factor AT3G19510 mRNA, complete
            cds
          Length = 2745

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggatgatgactatgatcc 236
            ||||||||||||||||||||
Sbjct: 1444 gaggatgatgactatgatcc 1463
to top
>ref|NM_120129.2| Arabidopsis thaliana DNA binding AT4G39680 mRNA, complete cds
          Length = 2466

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 gagaaagagaaagttgatga 191
           ||||||||||||||||||||
Sbjct: 708 gagaaagagaaagttgatga 727
to top
>ref|XM_517957.1| PREDICTED: Pan troglodytes similar to chromosome 5 open reading frame
            19; SGC32445 protein (LOC462096), mRNA
          Length = 1145

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  gaacatgtgaaggagaaagagaaa 183
            ||||| ||||||||||||||||||
Sbjct: 1028 gaacacgtgaaggagaaagagaaa 1051
to top
>gb|AC109149.15| Mus musculus chromosome 19, clone RP24-178F17, complete sequence
          Length = 176668

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ttcatcacctcttctgagaa 155
             ||||||||||||||||||||
Sbjct: 90270 ttcatcacctcttctgagaa 90251
to top
>gb|AC147568.5| Mus musculus chromosome 7 clone RP23-15J23, complete sequence
          Length = 211115

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tcacctcttctgagaattca 159
             ||||||||||||||||||||
Sbjct: 82723 tcacctcttctgagaattca 82742
to top
>ref|XM_419609.1| PREDICTED: Gallus gallus similar to FGFR1 oncogene partner isoform
           b; fibroblast growth factor receptor 1 oncogene partner
           (LOC421568), mRNA
          Length = 2041

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   tgatcttccatcagacgatt 25
           ||||||||||||||||||||
Sbjct: 480 tgatcttccatcagacgatt 461
to top
>gb|BC044528.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, mRNA (cDNA
           clone MGC:55896 IMAGE:3818832), complete cds
          Length = 2039

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 203 cttctgaggactcggaggatgatgacta 230
           |||||||||  |||||||||||||||||
Sbjct: 160 cttctgagggatcggaggatgatgacta 187
to top
>gb|AC146084.2| Pan troglodytes BAC clone RP43-56L21 from 7, complete sequence
          Length = 152170

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 417    tcaatgtcacatctcactac 436
              ||||||||||||||||||||
Sbjct: 124065 tcaatgtcacatctcactac 124084
to top
>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence
          Length = 378763

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     gtcatcagaagaggaggggg 106
              ||||||||||||||||||||
Sbjct: 180211 gtcatcagaagaggaggggg 180192
to top
>gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, complete sequence
          Length = 212687

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 ttcatcacctcttctgagaa 155
           ||||||||||||||||||||
Sbjct: 199 ttcatcacctcttctgagaa 218
to top
>gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, complete sequence
          Length = 170842

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tgaaggagaaagagaaagtt 186
             ||||||||||||||||||||
Sbjct: 56448 tgaaggagaaagagaaagtt 56467
to top
>gb|AC004879.2| Homo sapiens PAC clone RP4-755G17 from 7, complete sequence
          Length = 134904

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   tcaatgtcacatctcactac 436
             ||||||||||||||||||||
Sbjct: 24967 tcaatgtcacatctcactac 24948
to top
>gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190140

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    cttgtggtaaggatgaagtt 351
              ||||||||||||||||||||
Sbjct: 134911 cttgtggtaaggatgaagtt 134892
to top
>ref|NM_016606.2| Homo sapiens receptor accessory protein 2 (REEP2), mRNA
          Length = 2117

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  gaacatgtgaaggagaaagagaaa 183
            ||||| ||||||||||||||||||
Sbjct: 1978 gaacacgtgaaggagaaagagaaa 2001
to top
>emb|Z95328.1|HS447B16 Human DNA sequence from clone RP3-447B16 on chromosome Xq13.1-13.3,
             complete sequence
          Length = 93250

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    ccaatatatctgaagaacat 66
             ||||||||||||||||||||
Sbjct: 75956 ccaatatatctgaagaacat 75975
to top
>gb|BC006218.2| Homo sapiens receptor accessory protein 2, mRNA (cDNA clone MGC:10610
            IMAGE:3940709), complete cds
          Length = 2117

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  gaacatgtgaaggagaaagagaaa 183
            ||||| ||||||||||||||||||
Sbjct: 1978 gaacacgtgaaggagaaagagaaa 2001
to top
>emb|Z83313.1|HS106C24 Human DNA sequence from clone RP1-106C24 on chromosome X Contains a
            tropomyosin 2 (beta) (TPM2) pseudogene, complete sequence
          Length = 93959

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 59   aagaacatgtgtctggtcac 78
            ||||||||||||||||||||
Sbjct: 3766 aagaacatgtgtctggtcac 3785
to top
>emb|AL627250.8| Human DNA sequence from clone RP13-222H17 on chromosome X Contains a
             novel pseudogene, complete sequence
          Length = 177796

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   agaaagagaaagttgatgac 192
             ||||||||||||||||||||
Sbjct: 63323 agaaagagaaagttgatgac 63342
to top
>gb|AC090122.26| Mus musculus strain C57BL/6J clone rp23-28a7 map 7, complete sequence
          Length = 212485

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    atgtgaaggagaaagagaaa 183
              ||||||||||||||||||||
Sbjct: 202955 atgtgaaggagaaagagaaa 202936
to top
>gb|AC005392.2| Homo sapiens chromosome 19 clone CTC-490G23, complete sequence
          Length = 243197

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    tgtgaaggagaaagagaaag 184
              ||||||||||||||||||||
Sbjct: 128072 tgtgaaggagaaagagaaag 128053
to top
>emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complete sequence
          Length = 164399

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   gtgaaggagaaagagaaagt 185
             ||||||||||||||||||||
Sbjct: 98899 gtgaaggagaaagagaaagt 98918
to top
>emb|X69512.1|ATHAT31A A.thaliana HAT3.1 mRNA
          Length = 2745

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggatgatgactatgatcc 236
            ||||||||||||||||||||
Sbjct: 1459 gaggatgatgactatgatcc 1478
to top
>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence
          Length = 207799

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    gactctgatgactcaaattt 137
              ||||||||||||||||||||
Sbjct: 191040 gactctgatgactcaaattt 191021
to top
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
          Length = 198151

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gagaaagagaaagttgatga 191
              ||||||||||||||||||||
Sbjct: 136667 gagaaagagaaagttgatga 136648
to top
>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project)
          Length = 129047

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gagaaagagaaagttgatga 191
              ||||||||||||||||||||
Sbjct: 111453 gagaaagagaaagttgatga 111434
to top
>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project)
          Length = 88343

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gagaaagagaaagttgatga 191
             ||||||||||||||||||||
Sbjct: 19637 gagaaagagaaagttgatga 19618
to top
>emb|AJ296304.1|MMU296304 Mus musculus lmo1 gene for putative human LMO1 homologue, exons 1-4
          Length = 185655

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    tcacctcttctgagaattca 159
              ||||||||||||||||||||
Sbjct: 151843 tcacctcttctgagaattca 151862
to top
>gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, complete sequence
          Length = 194334

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gactctgatgactcaaattt 137
             ||||||||||||||||||||
Sbjct: 11610 gactctgatgactcaaattt 11591
to top
>gb|AC024077.2| Homo sapiens chromosome 19 clone LLNL-F_204C10, complete sequence
          Length = 42649

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  tgtgaaggagaaagagaaag 184
            ||||||||||||||||||||
Sbjct: 4411 tgtgaaggagaaagagaaag 4430
to top
>gb|AC183545.2| Pan troglodytes BAC clone CH251-233G24 from chromosome 19, complete
             sequence
          Length = 151627

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   tgtgaaggagaaagagaaag 184
             ||||||||||||||||||||
Sbjct: 18828 tgtgaaggagaaagagaaag 18847
to top
>emb|CR609366.1| full-length cDNA clone CS0DN001YG10 of Adult brain of Homo sapiens
            (human)
          Length = 1410

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  gaacatgtgaaggagaaagagaaa 183
            ||||| ||||||||||||||||||
Sbjct: 1321 gaacacgtgaaggagaaagagaaa 1344
to top
>dbj|AK056193.1| Homo sapiens cDNA FLJ31631 fis, clone NT2RI2003383, highly similar to
            Homo sapiens SGC32445 protein mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  gaacatgtgaaggagaaagagaaa 183
            ||||| ||||||||||||||||||
Sbjct: 2026 gaacacgtgaaggagaaagagaaa 2049
to top
>gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, complete sequence
          Length = 91296

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   aagatgagtcagacttcaca 294
             ||||||||||||||||||||
Sbjct: 26394 aagatgagtcagacttcaca 26413
to top
>gb|AC091894.2| Homo sapiens chromosome 5 clone RP11-138J23, complete sequence
          Length = 175552

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   aagatgagtcagacttcaca 294
             ||||||||||||||||||||
Sbjct: 13415 aagatgagtcagacttcaca 13396
to top
>gb|AC004821.3| Homo sapiens chromosome 5 clone RP1-98O22, complete sequence
          Length = 163332

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   gaacatgtgaaggagaaagagaaa 183
             ||||| ||||||||||||||||||
Sbjct: 34969 gaacacgtgaaggagaaagagaaa 34946
to top
>ref|XM_678241.1| PREDICTED: Danio rerio similar to DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 41 (LOC555667), partial mRNA
          Length = 305

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 203 cttctgaggactcggaggatgatgacta 230
           |||||||||  |||||||||||||||||
Sbjct: 82  cttctgagggatcggaggatgatgacta 109
to top
>gb|AC111001.4| Homo sapiens BAC clone RP13-933J18 from 4, complete sequence
          Length = 119175

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  atgtgaaggagaaagagaaa 183
            ||||||||||||||||||||
Sbjct: 6998 atgtgaaggagaaagagaaa 7017
to top
>emb|BX826433.1|CNS0A4A6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB26ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 2303

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 gagaaagagaaagttgatga 191
           ||||||||||||||||||||
Sbjct: 683 gagaaagagaaagttgatga 702
to top
>gb|AF251041.1|AF251041 Homo sapiens SGC32445 protein (SGC32445) mRNA, complete cds
          Length = 1965

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  gaacatgtgaaggagaaagagaaa 183
            ||||| ||||||||||||||||||
Sbjct: 1844 gaacacgtgaaggagaaagagaaa 1867
to top
>gb|AC112232.5| Homo sapiens BAC clone RP11-166K6 from 4, complete sequence
          Length = 171050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  atgtgaaggagaaagagaaa 183
            ||||||||||||||||||||
Sbjct: 2548 atgtgaaggagaaagagaaa 2567
to top
>gb|AC156276.6| Mus musculus 10 BAC RP24-323L12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 199119

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    cttgtggtaaggatgaagtt 351
              ||||||||||||||||||||
Sbjct: 147403 cttgtggtaaggatgaagtt 147422
to top
>gb|AC112969.12| Mus musculus chromosome 8, clone RP24-331K7, complete sequence
          Length = 164201

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    aagtcttgtggtaaggatga 347
              ||||||||||||||||||||
Sbjct: 140377 aagtcttgtggtaaggatga 140396
to top
>dbj|AK223611.1| Homo sapiens mRNA for receptor expression enhancing protein 2
            variant, clone: FCC132H05
          Length = 2146

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  gaacatgtgaaggagaaagagaaa 183
            ||||| ||||||||||||||||||
Sbjct: 2011 gaacacgtgaaggagaaagagaaa 2034
to top
>gb|BT005965.1| Arabidopsis thaliana At3g19510 gene, complete cds
          Length = 2172

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggatgatgactatgatcc 236
            ||||||||||||||||||||
Sbjct: 1312 gaggatgatgactatgatcc 1331
to top
>gb|AC019060.5|AC019060 Homo sapiens BAC clone RP11-125K5 from Y, complete sequence
          Length = 116795

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   agaaagagaaagttgatgac 192
             ||||||||||||||||||||
Sbjct: 60471 agaaagagaaagttgatgac 60490
to top
>gb|AC113403.4| Homo sapiens chromosome 5 clone RP11-461O14, complete sequence
          Length = 167159

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   gaacatgtgaaggagaaagagaaa 183
             ||||| ||||||||||||||||||
Sbjct: 76334 gaacacgtgaaggagaaagagaaa 76357
to top
>gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone rp23-116a10, complete
              sequence
          Length = 228147

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    atgtgaaggagaaagagaaa 183
              ||||||||||||||||||||
Sbjct: 187371 atgtgaaggagaaagagaaa 187390
to top
>emb|AL954678.8| Zebrafish DNA sequence from clone CH211-207E14 in linkage group 9,
             complete sequence
          Length = 219500

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    catcagaagaggagggggatgaag 112
             |||||||||||||||| |||||||
Sbjct: 23857 catcagaagaggagggagatgaag 23880
to top
>dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLD14
          Length = 83097

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   gaggatgatgactatgatcc 236
             ||||||||||||||||||||
Sbjct: 77562 gaggatgatgactatgatcc 77543
to top
>dbj|AK117105.1| Arabidopsis thaliana At3g19510 mRNA for putative homeobox protein
            HAT3.1, complete cds, clone: RAFL16-64-G01
          Length = 2746

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gaggatgatgactatgatcc 236
            ||||||||||||||||||||
Sbjct: 1444 gaggatgatgactatgatcc 1463
to top
>emb|X73354.1|RSVGPE Respiratory syncytial virus (642) gene for G protein
          Length = 896

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 cttggattaccttctgagga 212
           ||||||||||||||||||||
Sbjct: 818 cttggattaccttctgagga 799
to top
>gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, complete sequence
          Length = 140856

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tgaaggagaaagagaaagtt 186
             ||||||||||||||||||||
Sbjct: 36965 tgaaggagaaagagaaagtt 36984
to top
>gb|AF065408.1|AF065408 Human respiratory syncytial virus strain WV19983 attachment
           glycoprotein G mRNA, partial cds
          Length = 888

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 cttggattaccttctgagga 212
           ||||||||||||||||||||
Sbjct: 809 cttggattaccttctgagga 790
to top
>emb|AL929510.17| Mouse DNA sequence from clone RP23-241O13 on chromosome 2, complete
             sequence
          Length = 160386

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   tgtgaaggagaaagagaaag 184
             ||||||||||||||||||||
Sbjct: 20471 tgtgaaggagaaagagaaag 20490
to top
>gb|AC005791.1|AC005791 Homo sapiens chromosome 19, cosmid R26371, complete sequence
          Length = 39266

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   tgtgaaggagaaagagaaag 184
             ||||||||||||||||||||
Sbjct: 19377 tgtgaaggagaaagagaaag 19358
to top
>gb|AF070551.1|AF070551 Homo sapiens clone 24515 mRNA sequence
          Length = 1655

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 160  gaacatgtgaaggagaaagagaaa 183
            ||||| ||||||||||||||||||
Sbjct: 1508 gaacacgtgaaggagaaagagaaa 1531
to top
>gb|AC004384.1|AC004384 Human Chromosome X clone bWXD531, complete sequence
          Length = 164675

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ccaatatatctgaagaacat 66
             ||||||||||||||||||||
Sbjct: 47101 ccaatatatctgaagaacat 47082
to top
>gb|AC004385.1|AC004385 Human Chromosome X clone bWXD547, complete sequence
          Length = 177311

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    ccaatatatctgaagaacat 66
             ||||||||||||||||||||
Sbjct: 30176 ccaatatatctgaagaacat 30195
to top
>gb|AC147221.4| Mus musculus BAC clone RP23-58K20 from 7, complete sequence
          Length = 223807

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    tcacctcttctgagaattca 159
              ||||||||||||||||||||
Sbjct: 167784 tcacctcttctgagaattca 167803
to top
>gb|AC138313.4| Mus musculus BAC clone RP23-243P9 from 9, complete sequence
          Length = 195883

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   gaaggagaaagagaaagttg 187
             ||||||||||||||||||||
Sbjct: 66858 gaaggagaaagagaaagttg 66839
to top
>ref|NM_201045.1| Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 (ddx41), mRNA
          Length = 2039

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 203 cttctgaggactcggaggatgatgacta 230
           |||||||||  |||||||||||||||||
Sbjct: 160 cttctgagggatcggaggatgatgacta 187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,309,109
Number of Sequences: 3902068
Number of extensions: 4309109
Number of successful extensions: 95003
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94800
Number of HSP's gapped (non-prelim): 203
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top