ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 at... 44 0.37
2ref|XM_380263.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 44 0.37
3ref|XM_687378.1| PREDICTED: Danio rerio similar to Leucyl-tRNA s... 44 0.37
4ref|XM_546777.2| PREDICTED: Canis familiaris similar to Parapleg... 42 1.5
5emb|BX510928.5| Zebrafish DNA sequence from clone DKEY-190G11 in... 42 1.5
6gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, comple... 42 1.5
7ref|XM_690282.1| PREDICTED: Danio rerio similar to cAMP-specific... 42 1.5
8gb|AF443184.1| Paracoccidioides brasiliensis subunit 26S from pr... 40 5.8
9ref|NM_103693.2| Arabidopsis thaliana unknown protein AT1G47970 ... 40 5.8
10ref|NM_117729.2| Arabidopsis thaliana SPK1 (SPIKE1) AT4G16340 (S... 40 5.8
11ref|XM_483828.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
12ref|NM_011801.1| Mus musculus craniofacial development protein 1... 40 5.8
13gb|BT012708.1| Lycopersicon esculentum clone 113586R, mRNA sequence 40 5.8
14ref|XM_972690.1| PREDICTED: Mus musculus craniofacial developmen... 40 5.8
15gb|AC127315.4| Mus musculus BAC clone RP23-218F21 from chromosom... 40 5.8
16gb|DQ483320.1| Gymnogyps californianus clone 23H microsatellite ... 40 5.8
17ref|XM_735147.1| Plasmodium chabaudi chabaudi helicase (PC000662... 40 5.8
18gb|AC127312.4| Mus musculus BAC clone RP23-306F21 from 15, compl... 40 5.8
19gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosom... 40 5.8
20gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 5.8
21gb|BT000731.1| Arabidopsis thaliana clone RAFL08-11-G02 (R11308)... 40 5.8
22emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 5.8
23emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 40 5.8
24emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, ... 40 5.8
25emb|AL033534.1|SPBC215 S.pombe chromosome II cosmid c215 40 5.8
26gb|BC005589.1| Mus musculus craniofacial development protein 1, ... 40 5.8
27gb|AC008622.6| Homo sapiens chromosome 19 clone CTB-147N14, comp... 40 5.8
28gb|AC092801.2| Homo sapiens chromosome 1 clone RP11-36N20, compl... 40 5.8
29gb|AC026123.24| Homo sapiens 16 BAC RP11-174D5 (Roswell Park Can... 40 5.8
30dbj|AK133989.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 5.8
31dbj|AK160532.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 5.8
32gb|BT006569.1| Arabidopsis thaliana At1g47970 gene, complete cds 40 5.8
33gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, compl... 40 5.8
34ref|NM_001022612.1| Schizosaccharomyces pombe 972h- hypothetical... 40 5.8
35gb|AF386997.1|AF386997 Arabidopsis thaliana Unknown protein (T2J... 40 5.8
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
37gb|AC078776.12|AC078776 Homo sapiens 12 BAC RP11-155I9 (Roswell ... 40 5.8
38gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, comp... 40 5.8
39emb|BX818414.1|CNS0AEBQ Arabidopsis thaliana Full-length cDNA Co... 40 5.8
40gb|AC051631.9|AC051631 Arabidopsis thaliana chromosome 1 BAC T2J... 40 5.8
41dbj|AB033766.2| Mus musculus mbcnt gene for BCNT, partial cds 40 5.8
42gb|AC078795.19| Homo sapiens 3 BAC RP11-362K14 (Roswell Park Can... 40 5.8
43ref|XM_233989.2| PREDICTED: Rattus norvegicus similar to craniof... 40 5.8
44gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete... 40 5.8
45dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.8
46dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
47dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
48gb|AC007344.3|AC007344 Homo sapiens chromosome 16 clone RPCI-11_... 40 5.8
49dbj|AK071244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
50dbj|AK066121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
51emb|AL928546.5| Mouse DNA sequence from clone RP23-412C22 on chr... 40 5.8
52emb|Y08219.1|MMCP27 M.musculus mRNA for cp27 gene 40 5.8
53dbj|AB010828.1| Mus musculus mRNA for BCNT, complete cds 40 5.8 
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region,
              partial sequence
          Length = 161264

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 42     gagacggacctcgccgctgcca 63
              ||||||||||||||||||||||
Sbjct: 101737 gagacggacctcgccgctgcca 101716
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>ref|XM_380263.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00087.1)
            partial mRNA
          Length = 1551

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 176  ctcctcttcatcttcttcaggggtta 201
            ||||||||||||||||||| ||||||
Sbjct: 1180 ctcctcttcatcttcttcacgggtta 1205
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>ref|XM_687378.1| PREDICTED: Danio rerio similar to Leucyl-tRNA synthetase,
           cytoplasmic (Leucine--tRNA ligase) (LeuRS) (LOC564018),
           mRNA
          Length = 852

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 176 ctcctcttcatcttcttcaggg 197
           ||||||||||||||||||||||
Sbjct: 381 ctcctcttcatcttcttcaggg 360
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>ref|XM_546777.2| PREDICTED: Canis familiaris similar to Paraplegin (Spastic
           paraplegia protein 7) (LOC489657), mRNA
          Length = 3898

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 176 ctcctcttcatcttcttcaggggtt 200
           |||||||||||| ||||||||||||
Sbjct: 753 ctcctcttcatcatcttcaggggtt 729
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>emb|BX510928.5| Zebrafish DNA sequence from clone DKEY-190G11 in linkage group 8,
             complete sequence
          Length = 197947

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 176   ctcctcttcatcttcttcagg 196
             |||||||||||||||||||||
Sbjct: 71856 ctcctcttcatcttcttcagg 71836
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>gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, complete sequence
          Length = 118504

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    ggaacttggagctggaggaga 97
             |||||||||||||||||||||
Sbjct: 91834 ggaacttggagctggaggaga 91814
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>ref|XM_690282.1| PREDICTED: Danio rerio similar to cAMP-specific 3,5-cyclic
            phosphodiesterase 4D (DPDE3) (PDE43) (LOC566998), mRNA
          Length = 4092

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 176  ctcctcttcatcttcttcagg 196
            |||||||||||||||||||||
Sbjct: 3879 ctcctcttcatcttcttcagg 3859
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>gb|AF443184.1| Paracoccidioides brasiliensis subunit 26S from proteosome (RPN2)
            gene; PbCyb5, citochrome b5 protein (CYB5) and acyl CoA
            dehydrogenase (ADH) genes; and Spt5p (SPT5) gene, partial
            cds
          Length = 7969

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ctcctcttcatcttcttcag 195
            ||||||||||||||||||||
Sbjct: 6625 ctcctcttcatcttcttcag 6606
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>ref|NM_103693.2| Arabidopsis thaliana unknown protein AT1G47970 mRNA, complete cds
          Length = 922

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 tcctcttcatcttcttcagg 196
           ||||||||||||||||||||
Sbjct: 628 tcctcttcatcttcttcagg 609
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>ref|NM_117729.2| Arabidopsis thaliana SPK1 (SPIKE1) AT4G16340 (SPK1) mRNA, complete
            cds
          Length = 6119

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ctcctcttcatcttcttcag 195
            ||||||||||||||||||||
Sbjct: 5829 ctcctcttcatcttcttcag 5810
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>ref|XM_483828.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4423

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 170 ccatggctcctcttcatcttcttc 193
           ||||||||||||||| ||||||||
Sbjct: 147 ccatggctcctcttcttcttcttc 124
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>ref|NM_011801.1| Mus musculus craniofacial development protein 1 (Cfdp1), mRNA
          Length = 1215

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 377 gctcctcttcatcttcttca 358
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>gb|BT012708.1| Lycopersicon esculentum clone 113586R, mRNA sequence
          Length = 1338

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 135 ctcttcttccttgccttgcttctt 158
           ||||||||||||| ||||||||||
Sbjct: 52  ctcttcttccttgtcttgcttctt 75
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>ref|XM_972690.1| PREDICTED: Mus musculus craniofacial development protein 1 (Cfdp1),
           mRNA
          Length = 963

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 436 gctcctcttcatcttcttca 417
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>gb|AC127315.4| Mus musculus BAC clone RP23-218F21 from chromosome 8, complete sequence
          Length = 207577

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   gctcctcttcatcttcttca 194
             ||||||||||||||||||||
Sbjct: 90833 gctcctcttcatcttcttca 90814
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>gb|DQ483320.1| Gymnogyps californianus clone 23H microsatellite sequence
          Length = 793

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 170 ccatggctcctcttcatcttcttc 193
           ||||| ||||||||||||||||||
Sbjct: 669 ccatgcctcctcttcatcttcttc 646
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>ref|XM_735147.1| Plasmodium chabaudi chabaudi helicase (PC000662.03.0) partial mRNA
          Length = 1665

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ctcctcttcatcttcttcag 195
            ||||||||||||||||||||
Sbjct: 1050 ctcctcttcatcttcttcag 1031
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>gb|AC127312.4| Mus musculus BAC clone RP23-306F21 from 15, complete sequence
          Length = 194254

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     acttggaacttggagctgga 92
              ||||||||||||||||||||
Sbjct: 102258 acttggaacttggagctgga 102277
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>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete
             sequence
          Length = 178254

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    acttggagctggaggagaga 99
             ||||||||||||||||||||
Sbjct: 28681 acttggagctggaggagaga 28662
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    tgcttcttgccgaggtccgc 170
              ||||||||||||||||||||
Sbjct: 409963 tgcttcttgccgaggtccgc 409982
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>gb|BT000731.1| Arabidopsis thaliana clone RAFL08-11-G02 (R11308) unknown protein
           (At1g47970) mRNA, complete cds
          Length = 940

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 tcctcttcatcttcttcagg 196
           ||||||||||||||||||||
Sbjct: 628 tcctcttcatcttcttcagg 609
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>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5
          Length = 209164

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    ctcctcttcatcttcttcag 195
              ||||||||||||||||||||
Sbjct: 195135 ctcctcttcatcttcttcag 195154
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    ctgctcttcttccttgcctt 151
              ||||||||||||||||||||
Sbjct: 211965 ctgctcttcttccttgcctt 211946



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    ctgctcttcttccttgcctt 151
              ||||||||||||||||||||
Sbjct: 210693 ctgctcttcttccttgcctt 210674



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    ctgctcttcttccttgcctt 151
              ||||||||||||||||||||
Sbjct: 210030 ctgctcttcttccttgcctt 210011
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>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43
          Length = 198226

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    ctcctcttcatcttcttcag 195
              ||||||||||||||||||||
Sbjct: 164125 ctcctcttcatcttcttcag 164144
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>emb|AL033534.1|SPBC215 S.pombe chromosome II cosmid c215
          Length = 37777

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   gctcctcttcatcttcttca 194
             ||||||||||||||||||||
Sbjct: 28526 gctcctcttcatcttcttca 28507
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>gb|BC005589.1| Mus musculus craniofacial development protein 1, mRNA (cDNA clone
           MGC:11431 IMAGE:3964401), complete cds
          Length = 1193

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 358 gctcctcttcatcttcttca 339
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>gb|AC008622.6| Homo sapiens chromosome 19 clone CTB-147N14, complete sequence
          Length = 134882

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     agctggaggagagatggggg 105
              ||||||||||||||||||||
Sbjct: 126521 agctggaggagagatggggg 126502
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>gb|AC092801.2| Homo sapiens chromosome 1 clone RP11-36N20, complete sequence
          Length = 151199

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gctcctcttcatcttcttca 194
             ||||||||||||||||||||
Sbjct: 91100 gctcctcttcatcttcttca 91119
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>gb|AC026123.24| Homo sapiens 16 BAC RP11-174D5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    gctcctcttcatcttcttca 194
              ||||||||||||||||||||
Sbjct: 148305 gctcctcttcatcttcttca 148324
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>dbj|AK133989.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730598P18 product:craniofacial
           development protein 1, full insert sequence
          Length = 1234

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 395 gctcctcttcatcttcttca 376
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>dbj|AK160532.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410003K07 product:craniofacial development
           protein 1, full insert sequence
          Length = 1162

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 342 gctcctcttcatcttcttca 323
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>gb|BT006569.1| Arabidopsis thaliana At1g47970 gene, complete cds
          Length = 597

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 tcctcttcatcttcttcagg 196
           ||||||||||||||||||||
Sbjct: 557 tcctcttcatcttcttcagg 538
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>gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, complete sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    gctcctcttcatcttcttca 194
              ||||||||||||||||||||
Sbjct: 175633 gctcctcttcatcttcttca 175614
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>ref|NM_001022612.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC215.12),
           partial mRNA
          Length = 2952

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 70  gctcctcttcatcttcttca 51
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>gb|AF386997.1|AF386997 Arabidopsis thaliana Unknown protein (T2J15.12) mRNA, complete cds
          Length = 807

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 tcctcttcatcttcttcagg 196
           ||||||||||||||||||||
Sbjct: 623 tcctcttcatcttcttcagg 604
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 170      ccatggctcctcttcatcttcttc 193
                ||||||||||||||| ||||||||
Sbjct: 28297954 ccatggctcctcttcttcttcttc 28297977
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>gb|AC078776.12|AC078776 Homo sapiens 12 BAC RP11-155I9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 95801

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gctcctcttcatcttcttca 194
             ||||||||||||||||||||
Sbjct: 72644 gctcctcttcatcttcttca 72663
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>gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, complete sequence
          Length = 163170

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    gctcctcttcatcttcttca 194
              ||||||||||||||||||||
Sbjct: 130268 gctcctcttcatcttcttca 130249
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>emb|BX818414.1|CNS0AEBQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL78ZA04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 798

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 tcctcttcatcttcttcagg 196
           ||||||||||||||||||||
Sbjct: 611 tcctcttcatcttcttcagg 592
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>gb|AC051631.9|AC051631 Arabidopsis thaliana chromosome 1 BAC T2J15 genomic sequence, complete
             sequence
          Length = 96221

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   tcctcttcatcttcttcagg 196
             ||||||||||||||||||||
Sbjct: 75312 tcctcttcatcttcttcagg 75331
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>dbj|AB033766.2| Mus musculus mbcnt gene for BCNT, partial cds
          Length = 25949

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  gctcctcttcatcttcttca 194
            ||||||||||||||||||||
Sbjct: 6972 gctcctcttcatcttcttca 6953
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>gb|AC078795.19| Homo sapiens 3 BAC RP11-362K14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125445

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   gctcctcttcatcttcttca 194
             ||||||||||||||||||||
Sbjct: 24874 gctcctcttcatcttcttca 24855
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>ref|XM_233989.2| PREDICTED: Rattus norvegicus similar to craniofacial development
           protein 1 (LOC313982), mRNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 393 gctcctcttcatcttcttca 374
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>gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete sequence
          Length = 176539

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gctcctcttcatcttcttca 194
             ||||||||||||||||||||
Sbjct: 47460 gctcctcttcatcttcttca 47479
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 131     gctgctcttcttccttgccttgct 154
               ||||||||||||||| ||||||||
Sbjct: 3759675 gctgctcttcttcctcgccttgct 3759698
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   ccatggctcctcttcatcttcttc 193
             ||||||||||||||| ||||||||
Sbjct: 26760 ccatggctcctcttcttcttcttc 26783
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>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0705A05
          Length = 143765

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   ccatggctcctcttcatcttcttc 193
             ||||||||||||||| ||||||||
Sbjct: 89769 ccatggctcctcttcttcttcttc 89792
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>gb|AC007344.3|AC007344 Homo sapiens chromosome 16 clone RPCI-11_466G2, complete sequence
          Length = 180827

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gctcctcttcatcttcttca 194
             ||||||||||||||||||||
Sbjct: 43891 gctcctcttcatcttcttca 43910
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>dbj|AK071244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088K02, full
           insert sequence
          Length = 4423

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 170 ccatggctcctcttcatcttcttc 193
           ||||||||||||||| ||||||||
Sbjct: 147 ccatggctcctcttcttcttcttc 124
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>dbj|AK066121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057L06, full
           insert sequence
          Length = 3370

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 246 gctgaagtgcacactcttcgccggattgcggcgaatatggggatatcgcattggaacttc 305
           ||||||||||  |||||||| || || |||  ||| |||||||| | || ||||||||||
Sbjct: 200 gctgaagtgcgtactcttcgtcgtatcgcgcagaagatggggatcttgcgttggaacttc 259

               
Query: 306 tccg 309
           ||||
Sbjct: 260 tccg 263
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>emb|AL928546.5| Mouse DNA sequence from clone RP23-412C22 on chromosome 2, complete
             sequence
          Length = 193834

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   caacaataccatatgccatg 378
             ||||||||||||||||||||
Sbjct: 95378 caacaataccatatgccatg 95397
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>emb|Y08219.1|MMCP27 M.musculus mRNA for cp27 gene
          Length = 1141

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 376 gctcctcttcatcttcttca 357
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>dbj|AB010828.1| Mus musculus mRNA for BCNT, complete cds
          Length = 1215

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 gctcctcttcatcttcttca 194
           ||||||||||||||||||||
Sbjct: 377 gctcctcttcatcttcttca 358


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,519,923
Number of Sequences: 3902068
Number of extensions: 4519923
Number of successful extensions: 108575
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108382
Number of HSP's gapped (non-prelim): 193
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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