ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl33c07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 94 tggaccccgcccaggcggaggcctacctccacatgatccgcgagcagcagcg 145 ||||||| || ||||||||||| ||||| | ||||||||| ||||||||||| Sbjct: 27997 tggacccggcgcaggcggaggcgtacctgcgcatgatccgggagcagcagcg 27946 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 253 tggcggccgggagctcgttggggcaccgtgtggacc 288 ||||||| |||||||||||||| ||||| ||||||| Sbjct: 27838 tggcggcggggagctcgttgggtcaccgggtggacc 27803 Score = 40.1 bits (20), Expect = 4.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 12 cccgacgacatctagcagctcaataaccgtctccgcgccctcgt 55 |||||||||||| ||||||||| |||| |||||||| ||||| Sbjct: 28079 cccgacgacatcgcgcagctcaaccaccgcctccgcgcgctcgt 28036
>gb|AC134256.4| Oryza sativa (japonica cultivar-group), complete sequence Length = 178233 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 94 tggaccccgcccaggcggaggcctacctccacatgatccgcgagcagcagcg 145 ||||||| || ||||||||||| ||||| | ||||||||| ||||||||||| Sbjct: 177782 tggacccggcgcaggcggaggcgtacctgcgcatgatccgggagcagcagcg 177731 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 253 tggcggccgggagctcgttggggcaccgtgtggacc 288 ||||||| |||||||||||||| ||||| ||||||| Sbjct: 177623 tggcggcggggagctcgttgggtcaccgggtggacc 177588 Score = 40.1 bits (20), Expect = 4.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 12 cccgacgacatctagcagctcaataaccgtctccgcgccctcgt 55 |||||||||||| ||||||||| |||| |||||||| ||||| Sbjct: 177864 cccgacgacatcgcgcagctcaaccaccgcctccgcgcgctcgt 177821
>dbj|AK120240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D20, full insert sequence Length = 3224 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 94 tggaccccgcccaggcggaggcctacctccacatgatccgcgagcagcagcg 145 ||||||| || ||||||||||| ||||| | ||||||||| ||||||||||| Sbjct: 343 tggacccggcgcaggcggaggcgtacctgcgcatgatccgggagcagcagcg 394 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Plus Query: 253 tggcggccgggagctcgttggggcaccgtgtggacc 288 ||||||| |||||||||||||| ||||| ||||||| Sbjct: 502 tggcggcggggagctcgttgggtcaccgggtggacc 537 Score = 40.1 bits (20), Expect = 4.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 12 cccgacgacatctagcagctcaataaccgtctccgcgccctcgt 55 |||||||||||| ||||||||| |||| |||||||| ||||| Sbjct: 261 cccgacgacatcgcgcagctcaaccaccgcctccgcgcgctcgt 304
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 56.0 bits (28), Expect = 7e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 94 tggaccccgcccaggcggaggcctacctccacatgatccgcgagcagcagcg 145 ||||||| || ||||||||||| ||||| | ||||||||| ||||||||||| Sbjct: 18922803 tggacccggcgcaggcggaggcgtacctgcgcatgatccgggagcagcagcg 18922752 Score = 48.1 bits (24), Expect = 0.016 Identities = 33/36 (91%) Strand = Plus / Minus Query: 253 tggcggccgggagctcgttggggcaccgtgtggacc 288 ||||||| |||||||||||||| ||||| ||||||| Sbjct: 18922644 tggcggcggggagctcgttgggtcaccgggtggacc 18922609 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 22851880 cggcgaggacgaggaggagggcg 22851902 Score = 40.1 bits (20), Expect = 4.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 12 cccgacgacatctagcagctcaataaccgtctccgcgccctcgt 55 |||||||||||| ||||||||| |||| |||||||| ||||| Sbjct: 18922885 cccgacgacatcgcgcagctcaaccaccgcctccgcgcgctcgt 18922842 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 tctccgcgccctcgtccgccgccg 64 ||||||||||||| |||||||||| Sbjct: 7949885 tctccgcgccctcctccgccgccg 7949908 Score = 40.1 bits (20), Expect = 4.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcggcgg 238 ||| ||||| ||||||||||||||||| Sbjct: 7540670 cggcgaggaggaggaggagggcggcgg 7540696
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 134 cgagcagcagcgcctcggcctccg 157 |||||||||||||||||||||||| Sbjct: 1189965 cgagcagcagcgcctcggcctccg 1189942
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 134 cgagcagcagcgcctcggcctccg 157 |||||||||||||||||||||||| Sbjct: 578581 cgagcagcagcgcctcggcctccg 578558
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Plus Query: 134 cgagcagcagcgcctcggcctccg 157 |||||||||||||||||||||||| Sbjct: 3196198 cgagcagcagcgcctcggcctccg 3196221
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Plus Query: 134 cgagcagcagcgcctcggcctccg 157 |||||||||||||||||||||||| Sbjct: 89707 cgagcagcagcgcctcggcctccg 89730
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 134 cgagcagcagcgcctcggcctccg 157 |||||||||||||||||||||||| Sbjct: 148024 cgagcagcagcgcctcggcctccg 148001
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 134 cgagcagcagcgcctcggcctccg 157 |||||||||||||||||||||||| Sbjct: 119263 cgagcagcagcgcctcggcctccg 119240
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Plus Query: 134 cgagcagcagcgcctcggcctccg 157 |||||||||||||||||||||||| Sbjct: 2926064 cgagcagcagcgcctcggcctccg 2926087
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 134 cgagcagcagcgcctcggcctccg 157 |||||||||||||||||||||||| Sbjct: 1948375 cgagcagcagcgcctcggcctccg 1948352
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcgg 238 ||||||||||||||||||||||| Sbjct: 186395 gaggacgaggaggagggcggcgg 186373
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcgg 238 ||||||||||||||||||||||| Sbjct: 4488 gaggacgaggaggagggcggcgg 4466
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcgg 238 ||||||||||||||||||||||| Sbjct: 3100049 gaggacgaggaggagggcggcgg 3100027 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgcgagcagcagcgcctcgg 151 |||||||||||||||||||| Sbjct: 31858241 cgcgagcagcagcgcctcgg 31858222
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcgg 238 ||||||||||||||||||||||| Sbjct: 161124 gaggacgaggaggagggcggcgg 161102
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 agcagcagcgcctcggcctccg 157 |||||||||||||||||||||| Sbjct: 3238408 agcagcagcgcctcggcctccg 3238429
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 133 gcgagcagcagcgcctcggcctccgc 158 |||| ||||||||||||||||||||| Sbjct: 3030869 gcgaacagcagcgcctcggcctccgc 3030844 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cagcagcgcctcggcctccg 157 |||||||||||||||||||| Sbjct: 1032794 cagcagcgcctcggcctccg 1032813
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 cgagcagcagcgcctcggcctc 155 |||||||||||||||||||||| Sbjct: 2478133 cgagcagcagcgcctcggcctc 2478154 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cgagcagcagcgcctcggcc 153 |||||||||||||||||||| Sbjct: 2442616 cgagcagcagcgcctcggcc 2442635
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 tccgcgagcagcagcgcctcgg 151 |||||||||||||||||||||| Sbjct: 204487 tccgcgagcagcagcgcctcgg 204508
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 agcagcagcgcctcggcctccg 157 |||||||||||||||||||||| Sbjct: 2457773 agcagcagcgcctcggcctccg 2457752
>gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome 10, complete sequence Length = 214638 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 114847 atggcggcctggagctcgttggggc 114823
>ref|NM_188271.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 42.1 bits (21), Expect = 1.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcggcgga 239 ||| ||||||| |||||||||||||||| Sbjct: 218 cggtgaggacgcggaggagggcggcgga 245
>gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence Length = 252639 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 50560 atggcggcctggagctcgttggggc 50584
>ref|XM_450683.1| Oryza sativa (japonica cultivar-group), mRNA Length = 819 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gaggacgaggaggagggcggc 236 ||||||||||||||||||||| Sbjct: 124 gaggacgaggaggagggcggc 144
>ref|XM_450682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gaggacgaggaggagggcggc 236 ||||||||||||||||||||| Sbjct: 20 gaggacgaggaggagggcggc 40
>ref|XM_413987.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ13291 (LOC415621), mRNA Length = 1692 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gcgagcagcagcgcctcggcc 153 ||||||||||||||||||||| Sbjct: 153 gcgagcagcagcgcctcggcc 133
>ref|XM_850100.1| PREDICTED: Canis familiaris similar to AT-rich interactive domain-containing protein 3A (ARID domain-containing protein 3A) (B-cell regulator of IgH transcription) (Bright) (E2F binding protein 1) (LOC612370), mRNA Length = 1689 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 251 gatggcggccgggagctcgttgggg 275 |||||||||| |||||||||||||| Sbjct: 612 gatggcggcctggagctcgttgggg 588
>emb|AL591647.14| Human DNA sequence from clone RP11-92F1 on chromosome 1 Contains the SNFT gene for Jun dimerization protein p21SNFT, a novel gene (DC8) (DKFZP566O1646) and a CpG island, complete sequence Length = 97826 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 tgcctcatcccccatggaccc 100 ||||||||||||||||||||| Sbjct: 10951 tgcctcatcccccatggaccc 10971
>gb|AY113433.1| Drosophila melanogaster RE25737 full insert cDNA Length = 1116 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 624 ggacccagcccaggcggaggcctac 648
>gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-309M23, complete sequence Length = 185825 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 105742 atggcggcctggagctcgttggggc 105718
>ref|NM_164385.1| Drosophila melanogaster lesswright CG3018-RB, transcript variant B (lwr), mRNA Length = 1288 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 653 ggacccagcccaggcggaggcctac 677
>ref|NM_057630.3| Drosophila melanogaster lesswright CG3018-RA, transcript variant A (lwr), mRNA Length = 1259 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 624 ggacccagcccaggcggaggcctac 648
>gb|U60335.1|MMU60335 Mus musculus Bright mRNA, complete cds Length = 4842 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 1301 atggcggcctggagctcgttggggc 1277
>dbj|AK154956.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630112N16 product:AT rich interactive domain 3A (Bright like), full insert sequence Length = 5327 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 1485 atggcggcctggagctcgttggggc 1461
>dbj|AK141283.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430019I12 product:AT rich interactive domain 3A (Bright like), full insert sequence Length = 4893 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 1360 atggcggcctggagctcgttggggc 1336
>dbj|AK155569.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630326O08 product:AT rich interactive domain 3A (Bright like), full insert sequence Length = 1843 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 367 atggcggcctggagctcgttggggc 343
>gb|AY060944.1| Drosophila melanogaster GM08377 full length cDNA Length = 1274 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 625 ggacccggcccaggcggaggcctac 649
>gb|S68884.1| Saccharopolyspora erythraea malonyl-coenzyme A decarboxylase (eryM) gene, complete cds Length = 2140 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcgcctcggcctccgcca 160 ||||||||||||||||||||| Sbjct: 1881 gcagcgcctcggcctccgcca 1861
>emb|BX934607.2| Gallus gallus finished cDNA, clone ChEST382j22 Length = 905 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gcgagcagcagcgcctcggcc 153 ||||||||||||||||||||| Sbjct: 152 gcgagcagcagcgcctcggcc 132
>gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome 2L, region 21D-21E, BAC clone BACR48E08, complete sequence Length = 182726 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 115437 ggacccagcccaggcggaggcctac 115461
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggc 236 ||||||||||||||||||||| Sbjct: 12213236 gaggacgaggaggagggcggc 12213216 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gacgaggaggagggcggcgg 238 |||||||||||||||||||| Sbjct: 16876524 gacgaggaggagggcggcgg 16876505
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 ggaggagggcggcggaaggag 244 ||||||||||||||||||||| Sbjct: 30252845 ggaggagggcggcggaaggag 30252825 Score = 42.1 bits (21), Expect = 1.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 204 ggcagcaacggngaggacgaggaggagggcgg 235 ||||||| ||| ||||| |||||||||||||| Sbjct: 16634195 ggcagcagcggggaggaggaggaggagggcgg 16634164
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 212 cggngaggacgaggaggagggcggcgga 239 ||| ||||||| |||||||||||||||| Sbjct: 5393133 cggtgaggacgcggaggagggcggcgga 5393106 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgagcagcagcgcctcggc 152 |||||||||||||||||||| Sbjct: 40105645 gcgagcagcagcgcctcggc 40105664
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 42.1 bits (21), Expect = 1.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 212 cggngaggacgaggaggagggcggcgga 239 ||| ||||||| |||||||||||||||| Sbjct: 144477 cggtgaggacgcggaggagggcggcgga 144450
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 42.1 bits (21), Expect = 1.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 204 ggcagcaacggngaggacgaggaggagggcgg 235 ||||||| ||| ||||| |||||||||||||| Sbjct: 130175 ggcagcagcggggaggaggaggaggagggcgg 130144
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 ggaggagggcggcggaaggag 244 ||||||||||||||||||||| Sbjct: 119180 ggaggagggcggcggaaggag 119160
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggc 236 ||||||||||||||||||||| Sbjct: 124695 gaggacgaggaggagggcggc 124675
>dbj|AK120595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147K17, full insert sequence Length = 5013 Score = 42.1 bits (21), Expect = 1.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 204 ggcagcaacggngaggacgaggaggagggcgg 235 ||||||| ||| ||||| |||||||||||||| Sbjct: 338 ggcagcagcggggaggaggaggaggagggcgg 307
>gb|AF218861.1|AF218861 Drosophila melanogaster Dorsal interacting protein 4 (Ubc9) mRNA, complete cds Length = 1095 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 599 ggacccagcccaggcggaggcctac 623
>dbj|AK105479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-A10, full insert sequence Length = 1440 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gaggacgaggaggagggcggc 236 ||||||||||||||||||||| Sbjct: 134 gaggacgaggaggagggcggc 154
>dbj|AK105322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G10, full insert sequence Length = 819 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gaggacgaggaggagggcggc 236 ||||||||||||||||||||| Sbjct: 124 gaggacgaggaggagggcggc 144
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cagcagcgcctcggcctccgc 158 ||||||||||||||||||||| Sbjct: 1643434 cagcagcgcctcggcctccgc 1643454
>dbj|AK068509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154B19, full insert sequence Length = 1485 Score = 42.1 bits (21), Expect = 1.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcggcgga 239 ||| ||||||| |||||||||||||||| Sbjct: 281 cggtgaggacgcggaggagggcggcgga 308
>emb|AL451077.9| Human DNA sequence from clone RP11-305A3 on chromosome 1, complete sequence Length = 173609 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 tgcctcatcccccatggaccc 100 ||||||||||||||||||||| Sbjct: 140624 tgcctcatcccccatggaccc 140604
>gb|BC050925.1| Mus musculus AT rich interactive domain 3A (Bright like), mRNA (cDNA clone MGC:63320 IMAGE:6831312), complete cds Length = 4962 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 1417 atggcggcctggagctcgttggggc 1393
>gb|AF106664.1|AF106664 Drosophila melanogaster ubiquitin-conjugating enzyme (semi) gene, semi-02858 allele, complete cds Length = 2321 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 994 ggacccggcccaggcggaggcctac 1018
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 236030 ggacccagcccaggcggaggcctac 236006
>gb|AC004573.1|AC004573 Drosophila melanogaster, chromosome 2L, region 21C5-21D1, P1 clone DS07610, complete sequence Length = 85095 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 1460 ggacccagcccaggcggaggcctac 1436
>gb|AF030444.1|AF030444 Drosophila melanogaster ubiquitin-conjugating enzyme 9 homolog mRNA, complete cds Length = 736 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 403 ggacccggcccaggcggaggcctac 427
>gb|AF030443.1|AF030443 Drosophila melanogaster ubiquitin-conjugating enzyme 9 (UBC9) gene, complete cds Length = 1345 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 990 ggacccggcccaggcggaggcctac 1014
>gb|L20947.1|CREEZYC Chlamydomonas reinhardtii ezy-1 mRNA, 3' end of cds Length = 1449 Score = 42.1 bits (21), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 acggngaggacgaggaggagggcg 234 |||| ||||||||||||||||||| Sbjct: 382 acggcgaggacgaggaggagggcg 405
>gb|L20946.1|CREEZYB Chlamydomonas reinhardtii ezy-1 mRNA, complete cds Length = 2148 Score = 42.1 bits (21), Expect = 1.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 acggngaggacgaggaggagggcg 234 |||| ||||||||||||||||||| Sbjct: 1078 acggcgaggacgaggaggagggcg 1101
>ref|NM_007880.2| Mus musculus AT rich interactive domain 3A (Bright like) (Arid3a), mRNA Length = 5327 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 atggcggccgggagctcgttggggc 276 ||||||||| ||||||||||||||| Sbjct: 1485 atggcggcctggagctcgttggggc 1461
>gb|L05192.1|SERMALCOAD Saccharopolyspora erythraea malonyl CoA decarboxylase, complete cds Length = 2140 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcagcgcctcggcctccgcca 160 ||||||||||||||||||||| Sbjct: 1881 gcagcgcctcggcctccgcca 1861
>dbj|AB017607.1| Drosophila melanogaster gene for ubiquitin-conjugating enzyme 9, complete cds Length = 1109 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 649 ggacccggcccaggcggaggcctac 673
>dbj|AB017606.1| Drosophila melanogaster mRNA for ubiquitin-conjugating enzyme 9, complete cds Length = 1050 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggaccccgcccaggcggaggcctac 119 |||||| |||||||||||||||||| Sbjct: 570 ggacccggcccaggcggaggcctac 594
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgcgagcagcagcgcctcgg 151 |||||||||||||||||||| Sbjct: 25104 cgcgagcagcagcgcctcgg 25085
>gb|AC114617.16| Mus musculus chromosome 5, clone RP24-84E3, complete sequence Length = 200977 Score = 40.1 bits (20), Expect = 4.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcggaaggaggaaggggatgg 255 ||||| ||||||||||| || || ||||||| |||||||| Sbjct: 127043 gaggaggaggaggagggaggagggaggaggatggggatgg 127004
>ref|XM_512124.1| PREDICTED: Pan troglodytes MAD, mothers against decapentaplegic homolog 7 (LOC455411), mRNA Length = 1628 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>ref|XM_473965.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1257 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgcgagcagcagcgcctcgg 151 |||||||||||||||||||| Sbjct: 132 cgcgagcagcagcgcctcgg 113
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 tctccgcgccctcgtccgccgccg 64 ||||||||||||| |||||||||| Sbjct: 118150 tctccgcgccctcctccgccgccg 118127
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 40.1 bits (20), Expect = 4.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 212 cggngaggacgaggaggagggcggcgg 238 ||| ||||| ||||||||||||||||| Sbjct: 214 cggcgaggaggaggaggagggcggcgg 188
>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084F23, complete sequence Length = 89829 Score = 40.1 bits (20), Expect = 4.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 212 cggngaggacgaggaggagggcggcgg 238 ||| ||||| ||||||||||||||||| Sbjct: 86257 cggcgaggaggaggaggagggcggcgg 86231
>gb|BC074818.2| Homo sapiens SMAD, mothers against DPP homolog 7 (Drosophila), mRNA (cDNA clone MGC:103929 IMAGE:30915321), complete cds Length = 1365 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 94 cggcgaggacgaggaggagggcg 116
>gb|AY662692.1| Sus scrofa 6A3-5 protein mRNA, complete cds Length = 5685 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gaggacgaggaggagggcgg 235 |||||||||||||||||||| Sbjct: 3728 gaggacgaggaggagggcgg 3747
>ref|XM_607061.2| PREDICTED: Bos taurus similar to hemicentin 1 (LOC528634), mRNA Length = 8271 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ccaggcggaggcctacctcc 123 |||||||||||||||||||| Sbjct: 3951 ccaggcggaggcctacctcc 3970
>ref|XM_881839.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2Q, transcript variant 5 (LOC505133), mRNA Length = 1882 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ggaaggaggaaggggatggc 256 |||||||||||||||||||| Sbjct: 1142 ggaaggaggaaggggatggc 1123
>ref|XM_881828.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2Q, transcript variant 4 (LOC505133), mRNA Length = 2054 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ggaaggaggaaggggatggc 256 |||||||||||||||||||| Sbjct: 1314 ggaaggaggaaggggatggc 1295
>ref|XM_881803.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2Q, transcript variant 3 (LOC505133), mRNA Length = 1946 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ggaaggaggaaggggatggc 256 |||||||||||||||||||| Sbjct: 1206 ggaaggaggaaggggatggc 1187
>ref|XM_868595.1| PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2Q, transcript variant 2 (LOC505133), mRNA Length = 2042 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ggaaggaggaaggggatggc 256 |||||||||||||||||||| Sbjct: 1302 ggaaggaggaaggggatggc 1283
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gcagcgcctcggcctccgcc 159 |||||||||||||||||||| Sbjct: 1153560 gcagcgcctcggcctccgcc 1153541
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030E22, complete sequence Length = 135468 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 99114 cggcgaggacgaggaggagggcg 99136
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gatccgcgagcagcagcgcctcgg 151 ||||||||||||||||||| |||| Sbjct: 2558951 gatccgcgagcagcagcgcttcgg 2558928 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 131 ccgcgagcagcagcgcctcggcctccgc 158 ||||| || ||||||||||||||||||| Sbjct: 1886199 ccgcgcgccgcagcgcctcggcctccgc 1886226
>ref|XM_986975.1| PREDICTED: Mus musculus MAD homolog 7 (Drosophila) (Smad7), mRNA Length = 1510 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>gb|AC121079.20| Mus musculus chromosome 3, clone RP24-178P12, complete sequence Length = 177802 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 81414 gcagcagcgcctcggcctcc 81395
>ref|XM_994275.1| PREDICTED: Mus musculus similar to hect domain and RLD 2 (LOC672544), mRNA Length = 6186 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 gagcagcagcgcctcggcctccgccagc 162 ||||| |||||||||||||||| ||||| Sbjct: 3375 gagcatcagcgcctcggcctccaccagc 3402
>ref|XM_132325.8| PREDICTED: Mus musculus expressed sequence AU042671, transcript variant 1 (AU042671), mRNA Length = 8231 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 gagcagcagcgcctcggcctccgccagc 162 ||||| |||||||||||||||| ||||| Sbjct: 3450 gagcatcagcgcctcggcctccaccagc 3477
>ref|XM_990451.1| PREDICTED: Mus musculus expressed sequence AU042671 (AU042671), mRNA Length = 8232 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 gagcagcagcgcctcggcctccgccagc 162 ||||| |||||||||||||||| ||||| Sbjct: 3450 gagcatcagcgcctcggcctccaccagc 3477
>gb|AC126938.2| Mus musculus BAC clone RP23-50I16 from chromosome 5, complete sequence Length = 187269 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gagcagcagcgcctcggcctccgccagc 162 ||||| |||||||||||||||| ||||| Sbjct: 60433 gagcatcagcgcctcggcctccaccagc 60406
>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23, complete sequence Length = 178472 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 aggaggaaggggatggcggccggg 263 ||||||||||||| |||||||||| Sbjct: 104059 aggaggaaggggagggcggccggg 104036
>ref|XM_538364.2| PREDICTED: Canis familiaris similar to voltage-dependent T-type calcium channel alpha-1I subunit isoform b (LOC481243), mRNA Length = 6555 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gacgaggaggagggcggcgg 238 |||||||||||||||||||| Sbjct: 35 gacgaggaggagggcggcgg 16
>gb|AC114684.10| Homo sapiens chromosome 18, clone RP11-1058N17, complete sequence Length = 196117 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 47650 cggcgaggacgaggaggagggcg 47672
>gb|AE014312.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 9 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 200589 gcagcagcgcctcggcctcc 200608
>ref|NM_005904.2| Homo sapiens SMAD, mothers against DPP homolog 7 (Drosophila) (SMAD7), mRNA Length = 3103 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 347 cggcgaggacgaggaggagggcg 369
>ref|XM_845400.1| PREDICTED: Canis familiaris similar to MAD homolog 7, transcript variant 3 (LOC490570), mRNA Length = 1293 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>ref|XM_856441.1| PREDICTED: Canis familiaris similar to MAD homolog 7, transcript variant 5 (LOC490570), mRNA Length = 1167 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>ref|XM_856415.1| PREDICTED: Canis familiaris similar to MAD homolog 7, transcript variant 4 (LOC490570), mRNA Length = 1539 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>ref|XM_547692.2| PREDICTED: Canis familiaris similar to MAD homolog 7, transcript variant 1 (LOC490570), mRNA Length = 1092 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>ref|NM_011368.3| Mus musculus src homology 2 domain-containing transforming protein C1 (Shc1), mRNA Length = 3144 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 1278 gcagcagcgcctcggcctcc 1259
>gb|BC058664.1| Mus musculus expressed sequence AU042671, mRNA (cDNA clone IMAGE:6409925), partial cds Length = 4831 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 gagcagcagcgcctcggcctccgccagc 162 ||||| |||||||||||||||| ||||| Sbjct: 378 gagcatcagcgcctcggcctccaccagc 405
>gb|AC104329.22| Mus musculus strain C57BL/6J clone rp23-418c12 map 3, complete sequence Length = 197096 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 144385 gcagcagcgcctcggcctcc 144404
>emb|AL772182.3| Human DNA sequence from clone RP11-36K22 on chromosome X, complete sequence Length = 161047 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 gaggaggagggcggcggaaggaggaagg 249 ||||||||||| || ||||||||||||| Sbjct: 119973 gaggaggagggaggaggaaggaggaagg 119946
>emb|AL590233.23| Human DNA sequence from clone RP13-93L13 on chromosome 9 Contains a ubiquitin-conjugating enzyme E2 pseudogene, a proliferation-associated 2G4, 38kDa (PA2G4) pseuodgene, the 5' end of the SEMA4D gene for sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D and a CpG island, complete sequence Length = 109008 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 cgaggaggagggcggcggaaggaggaag 248 |||||||||||| || |||||||||||| Sbjct: 4145 cgaggaggagggaggaggaaggaggaag 4172
>ref|NM_030858.1| Rattus norvegicus MAD homolog 7 (Drosophila) (Madh7), mRNA Length = 4311 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 1481 cggcgaggacgaggaggagggcg 1503
>emb|AL359751.12| Human DNA sequence from clone RP11-166E2 on chromosome 13 Contains the gene for LG30 and the DAOA gene for D-amino acid oxidase activator (LG72), complete sequence Length = 117068 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 17808 gcagcagcgcctcggcctcc 17827
>emb|AL157388.12| Human DNA sequence from clone RP11-215A21 on chromosome 10 Contains the 5' end of a novel gene (MGC33215), a ribosomal protein L17 (rpL23) (RPL17) pseudogene and three CpG islands, complete sequence Length = 183382 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gttggggcaccgtgtggacc 288 |||||||||||||||||||| Sbjct: 52803 gttggggcaccgtgtggacc 52822
>gb|AY170471.1| Homo sapiens putative schizophrenia protein variant 3 (G72) mRNA, complete cds; alternatively spliced Length = 973 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 62 gcagcagcgcctcggcctcc 81
>emb|X91807.1|OSTA136 O.sativa mRNA for alpha-tubulin (clone OSTA-136) Length = 1677 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 tctccgcgccctcgtccgccgccg 64 ||||||||||||| |||||||||| Sbjct: 21 tctccgcgccctcctccgccgccg 44
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgcgagcagcagcgcctcgg 151 |||||||||||||||||||| Sbjct: 31107 cgcgagcagcagcgcctcgg 31088
>emb|AJ488063.1|OSA488063 Oryza sativa (indica cultivar-group) partial tubA2 gene for tubulin alpha, exons 1-2 and promoter Length = 4493 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 tctccgcgccctcgtccgccgccg 64 ||||||||||||| |||||||||| Sbjct: 3169 tctccgcgccctcctccgccgccg 3192
>emb|AJ000884.1|PDJ000884 Paracoccus denitrificans, MxaA, MxaC, MxaK, MxaL, MxaD and orf's Length = 5962 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cgcgagcagcagcgcctcggcctc 155 |||| ||||||||||||||||||| Sbjct: 2434 cgcgggcagcagcgcctcggcctc 2411
>emb|AJ000551.1|MMSMAD7B Mus musculus mRNA for Mad-related protein Smad7B Length = 1278 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>emb|AJ000550.1|MMSMAD7 Mus musculus mRNA for Mad-related protein Smad7 Length = 3681 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 1496 cggcgaggacgaggaggagggcg 1518
>ref|NM_204952.1| Gallus gallus forkhead box D2 (FOXD2), mRNA Length = 1708 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gacgaggaggagggcggcgg 238 |||||||||||||||||||| Sbjct: 310 gacgaggaggagggcggcgg 329
>ref|NM_008543.1| Mus musculus MAD homolog 7 (Drosophila) (Smad7), mRNA Length = 3681 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 1496 cggcgaggacgaggaggagggcg 1518
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgagcagcagcgcctcggc 152 |||||||||||||||||||| Sbjct: 3591396 gcgagcagcagcgcctcggc 3591377
>gb|AF042499.1| Rattus norvegicus Smad7 mRNA, complete cds Length = 1548 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 206 cggcgaggacgaggaggagggcg 228
>dbj|AK139096.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730020C17 product:Hypothetical ubiquitin-protein ligase E3a (Fragment), full insert sequence Length = 5187 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 gagcagcagcgcctcggcctccgccagc 162 ||||| |||||||||||||||| ||||| Sbjct: 417 gagcatcagcgcctcggcctccaccagc 444
>gb|AF026556.1|HSSMAD7S01 Homo sapiens Smad7 (SMAD7) gene, exon 1 Length = 1231 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 355 cggcgaggacgaggaggagggcg 377
>gb|AF440201.1|AF440201 Synthetic construct EGF-receptor reporter mRNA, complete cds Length = 1761 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 739 gcagcagcgcctcggcctcc 720
>dbj|AK155158.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630204K04 product:src homology 2 domain-containing transforming protein C1, full insert sequence Length = 2619 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 1720 gcagcagcgcctcggcctcc 1701
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 cgagcagcagcgcctcggcctccg 157 ||||||||||||||||||| |||| Sbjct: 1103069 cgagcagcagcgcctcggcttccg 1103046
>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence Length = 207067 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gtccgccgccgtggtgtctcttcc 77 |||||||||||||||| ||||||| Sbjct: 68764 gtccgccgccgtggtggctcttcc 68741
>gb|BC074819.2| Homo sapiens SMAD, mothers against DPP homolog 7 (Drosophila), mRNA (cDNA clone MGC:104084 IMAGE:30915535), complete cds Length = 1365 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 94 cggcgaggacgaggaggagggcg 116
>dbj|AK049357.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330027D01 product:src homology 2 domain-containing transforming protein C1, full insert sequence Length = 3114 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 1300 gcagcagcgcctcggcctcc 1281
>gb|U46956.2|MMU46956 Mus musculus src homology collagen protein 66 kDa isoform gene, partial cds Length = 1739 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 1495 gcagcagcgcctcggcctcc 1476
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcgga 239 ||||||||||||||| |||||||| Sbjct: 4550253 gaggacgaggaggagcgcggcgga 4550230
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 22541969 cggcgaggacgaggaggagggcg 22541991 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 tctccgcgccctcgtccgccgccg 64 ||||||||||||| |||||||||| Sbjct: 7879798 tctccgcgccctcctccgccgccg 7879821 Score = 40.1 bits (20), Expect = 4.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcggcgg 238 ||| ||||| ||||||||||||||||| Sbjct: 7470584 cggcgaggaggaggaggagggcggcgg 7470610
>dbj|AB221688.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01Y053A15 Length = 1281 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>gb|AY897431.1| Drosophila buzzatii abdominal A (abdA) mRNA, partial cds Length = 505 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cgcctcggcctccgccagct 163 |||||||||||||||||||| Sbjct: 388 cgcctcggcctccgccagct 407
>gb|AY900631.1| Drosophila buzzatii clone BAC 5H14, complete sequence Length = 124024 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cgcctcggcctccgccagct 163 |||||||||||||||||||| Sbjct: 6462 cgcctcggcctccgccagct 6481
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcgagcagcagcgcctcggc 152 |||||||||||||||||||| Sbjct: 48729 gcgagcagcagcgcctcggc 48748
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 agcagcagcgcctcggcctccgcc 159 |||||| ||||||||||||||||| Sbjct: 4751147 agcagctgcgcctcggcctccgcc 4751170
>gb|AC005237.2|AC005237 Homo sapiens BAC clone RP11-556H17 from 2, complete sequence Length = 175179 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gaggacgaggaggagggcgg 235 |||||||||||||||||||| Sbjct: 156004 gaggacgaggaggagggcgg 156023
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 cgagcagcagcgcctcggcctccg 157 ||||||||||||||||||| |||| Sbjct: 541884 cgagcagcagcgcctcggcttccg 541861
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gagcagcagcgcctcggcctccgc 158 |||||||| ||||||||||||||| Sbjct: 3981480 gagcagcaccgcctcggcctccgc 3981457 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 tgatccgcgagcagcagcgcctcg 150 |||||||||||||| ||||||||| Sbjct: 1916401 tgatccgcgagcaggagcgcctcg 1916424
>dbj|AK205229.1| Mus musculus cDNA, clone:Y2G0101B02, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000039110, based on BLAT search Length = 335 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 199 gcagcagcgcctcggcctcc 180
>dbj|AK187752.1| Mus musculus cDNA, clone:Y0G0142O22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000031388, based on BLAT search Length = 157 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 133 gcagcagcgcctcggcctcc 152
>dbj|AK179865.1| Mus musculus cDNA, clone:Y0G0111P07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000031388, based on BLAT search Length = 157 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 133 gcagcagcgcctcggcctcc 152
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gacgaggaggagggcggcgg 238 |||||||||||||||||||| Sbjct: 6337 gacgaggaggagggcggcgg 6318
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gacgaggaggagggcggcgg 238 |||||||||||||||||||| Sbjct: 74215 gacgaggaggagggcggcgg 74196
>dbj|BS000161.1| Pan troglodytes chromosome 22 clone:PTB-058P10, map 22, complete sequences Length = 78415 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 gaggaggagggcggcggaaggaggaagg 249 ||||||||||| || ||||||||||||| Sbjct: 64441 gaggaggagggaggaggaaggaggaagg 64414
>dbj|AK129172.1| Mus musculus mRNA for mKIAA0614 protein Length = 5443 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 135 gagcagcagcgcctcggcctccgccagc 162 ||||| |||||||||||||||| ||||| Sbjct: 671 gagcatcagcgcctcggcctccaccagc 698
>ref|XM_317835.2| Anopheles gambiae str. PEST ENSANGP00000014391 (ENSANGG00000011902), partial mRNA Length = 1937 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tccgcgagcagcagcgcctcggcc 153 ||||||||||||||| |||||||| Sbjct: 580 tccgcgagcagcagctcctcggcc 557
>ref|XM_315727.2| Anopheles gambiae str. PEST ENSANGP00000016474 (ENSANGG00000013985), partial mRNA Length = 1467 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 1371 cggcgaggacgaggaggagggcg 1393
>dbj|AK111322.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-D06, full insert sequence Length = 692 Score = 40.1 bits (20), Expect = 4.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 212 cggngaggacgaggaggagggcggcgg 238 ||| ||||| ||||||||||||||||| Sbjct: 70 cggcgaggaggaggaggagggcggcgg 44
>dbj|AK109819.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A04, full insert sequence Length = 1928 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcgga 239 ||||||||||||||| |||||||| Sbjct: 152 gaggacgaggaggagcgcggcgga 129
>gb|AF159626.1|AF159626 Rattus norvegicus Smad7 protein mRNA, complete cds Length = 4311 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 1481 cggcgaggacgaggaggagggcg 1503
>gb|AF156727.1|RNSMAD1 Rattus norvegicus Smad7 protein (Smad7) gene, promoter and exon 1 Length = 3353 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 2800 cggcgaggacgaggaggagggcg 2822
>dbj|AK106459.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-G04, full insert sequence Length = 2357 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 631 cggcgaggacgaggaggagggcg 653
>dbj|AK102560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097H22, full insert sequence Length = 1760 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 tctccgcgccctcgtccgccgccg 64 ||||||||||||| |||||||||| Sbjct: 31 tctccgcgccctcctccgccgccg 54
>dbj|AK072941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F04, full insert sequence Length = 1738 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gacgaggaggagggcggcgg 238 |||||||||||||||||||| Sbjct: 190 gacgaggaggagggcggcgg 171
>dbj|AK071028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075E24, full insert sequence Length = 1862 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgcgagcagcagcgcctcgg 151 |||||||||||||||||||| Sbjct: 236 cgcgagcagcagcgcctcgg 217
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 agcagcagcgcctcggcctc 155 |||||||||||||||||||| Sbjct: 1123777 agcagcagcgcctcggcctc 1123758
>gb|BC036172.1| Mus musculus src homology 2 domain-containing transforming protein C1, mRNA (cDNA clone MGC:37600 IMAGE:4988907), complete cds Length = 3144 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 1278 gcagcagcgcctcggcctcc 1259
>dbj|AK062254.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G06, full insert sequence Length = 1642 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gacgaggaggagggcggcgg 238 |||||||||||||||||||| Sbjct: 135 gacgaggaggagggcggcgg 116
>gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, complete sequence Length = 153019 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 82463 cggcgaggacgaggaggagggcg 82441
>gb|U37272.1|GGU37272 Gallus gallus winged helix protein CWH-1 mRNA, complete cds Length = 1708 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gacgaggaggagggcggcgg 238 |||||||||||||||||||| Sbjct: 310 gacgaggaggagggcggcgg 329
>gb|U15784.1|MMU15784 Mus musculus Shcp52 (Shc) mRNA, complete cds Length = 1462 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 1217 gcagcagcgcctcggcctcc 1198
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcgga 239 ||||||||||||||| |||||||| Sbjct: 4550234 gaggacgaggaggagcgcggcgga 4550211
>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129155 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 gaggacgaggaggagggcggcgga 239 ||||||||||||||| |||||||| Sbjct: 54525 gaggacgaggaggagcgcggcgga 54548
>gb|AF015261.1|AF015261 Homo sapiens Smad7 protein mRNA, complete cds Length = 1281 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>gb|AF015260.1|AF015260 Mus musculus Smad7 mRNA, complete cds Length = 1281 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 60 cggcgaggacgaggaggagggcg 82
>gb|AF010193.1|AF010193 Homo sapiens MAD-related gene SMAD7 (SMAD7) mRNA, complete cds Length = 3111 Score = 40.1 bits (20), Expect = 4.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 212 cggngaggacgaggaggagggcg 234 ||| ||||||||||||||||||| Sbjct: 355 cggcgaggacgaggaggagggcg 377
>emb|CT025625.9| Mouse DNA sequence from clone RP23-449N15 on chromosome 12, complete sequence Length = 188300 Score = 40.1 bits (20), Expect = 4.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 216 gaggacgaggaggagggcggcggaaggaggaa 247 ||||| ||||||||||| || ||||||||||| Sbjct: 40141 gaggaggaggaggagggagggggaaggaggaa 40110
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 ccgcgagcagcagcgcctcggcct 154 |||||| ||||||||||||||||| Sbjct: 2307462 ccgcgatcagcagcgcctcggcct 2307485
>gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosome 3, complete sequence Length = 234363 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcagcagcgcctcggcctcc 156 |||||||||||||||||||| Sbjct: 114843 gcagcagcgcctcggcctcc 114862 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,367,185 Number of Sequences: 3902068 Number of extensions: 2367185 Number of successful extensions: 68010 Number of sequences better than 10.0: 168 Number of HSP's better than 10.0 without gapping: 175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65243 Number of HSP's gapped (non-prelim): 2767 length of query: 304 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 282 effective length of database: 17,147,199,772 effective search space: 4835510335704 effective search space used: 4835510335704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
