ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl33c01 |
|---|---|
| Clone Library Name | barley_pub |
>BCSB3_ACEXY (Q9WX62) Cyclic di-GMP-binding protein precursor (Cellulose| synthase regulatory subunit) (Cellulose synthase protein B) (CDGBP) Length = 804 Score = 33.5 bits (75), Expect = 0.14 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDP 126 AP + P H+P PP+ AA + A PSA VDP Sbjct: 19 APIASKAPAHQPTGSDLPPLPAAAPVAPAAQPSAQAVDP 57
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 32.3 bits (72), Expect = 0.32 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 Query: 239 PSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPRRG 117 P + +GPN P R P+S +++S ADP A P P G Sbjct: 299 PPDGTGPNSTPNNRAVTPVSQGSNSS-SADPKAPPPPPVSG 338
>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1003 Score = 32.0 bits (71), Expect = 0.41 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = -3 Query: 254 KCLYAPSETSGPNHKPEQRRR---PPISPAASASVEADPSAAPVDP 126 KCLY P +GP P + + P +SP+ A EA P +P DP Sbjct: 252 KCLYTPERAAGPATSPPRAQAFSDPRLSPSFRARPEA-PRHSPEDP 296
>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)| Length = 648 Score = 31.6 bits (70), Expect = 0.54 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASA-------SVEADPSAAPVDPRRGDG*E 105 AP +GP +P Q + PP P + A S E AAPV+P D E Sbjct: 392 APQAWAGPMEEPPQAQAPPRGPGSPAEDLMFMESAEQAVLAAPVEPATADATE 444
>ZN342_HUMAN (Q8WUU4) Zinc finger protein 342| Length = 475 Score = 31.6 bits (70), Expect = 0.54 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = -3 Query: 254 KCLYAPSETSGPN-HKPEQRRRPPISPAASASVEADPSAAPVDP 126 +C YA +++S N HK R+ PP SP + + + SAAP +P Sbjct: 263 QCPYACAQSSKLNRHKKTHRQVPPQSPLMADTSQEQASAAPPEP 306
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 31.6 bits (70), Expect = 0.54 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 239 PSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDP 126 P + +GPN P R P+S +++S ADP A P P Sbjct: 299 PPDGTGPNSTPNNRAVTPVSQGSNSS-SADPKAPPPPP 335
>REF2P_DROSI (Q24629) Protein ref(2)P (Refractory to sigma P)| Length = 599 Score = 30.8 bits (68), Expect = 0.92 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -3 Query: 248 LYAPSETSGP-NHKPEQRRRPP-ISPAASASVEADPSAAP 135 ++APS TS N KPE++ + S A+SAS A PSAAP Sbjct: 358 IFAPSTTSSAENKKPEEQSQSSGQSAASSASQSAVPSAAP 397
>TOR_CAEEL (Q95Q95) Target of rapamycin homolog (EC 2.7.11.1) (CeTOR) (Lethal| protein 363) Length = 2697 Score = 30.8 bits (68), Expect = 0.92 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 10/60 (16%) Frame = -3 Query: 284 WHLLWHLNLSKCLYA-------PSETSGPNHKPEQRRR---PPISPAASASVEADPSAAP 135 WH +WH S YA P+ P +P+Q ++ PP++ A S A S P Sbjct: 1921 WHKVWHKLASTHFYAVCRERPHPTTVISPPQQPQQPKKMHIPPVTRATSPPPPAQKSPQP 1980
>Y369_TREPA (O83384) Hypothetical protein TP0369 precursor| Length = 516 Score = 30.0 bits (66), Expect = 1.6 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAAS-----ASVEADPSAAPVDPR 123 +P S KP+QR PP P AS A V+A+P A PR Sbjct: 139 SPPPVSPSASKPKQRAVPPSPPPASEPPREAEVQAEPEPAEDSPR 183
>TATB_SHIFL (P69427) Sec-independent protein translocase protein tatB| Length = 171 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPRRGD 114 A ++ S P KPE P + PAA +A+P A P D Sbjct: 131 AQTQASSPEQKPETTPEPVVKPAA----DAEPKTAAPSPSSSD 169
>TATB_ECOLI (P69425) Sec-independent protein translocase protein tatB| Length = 171 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPRRGD 114 A ++ S P KPE P + PAA +A+P A P D Sbjct: 131 AQTQASSPEQKPETTPEPVVKPAA----DAEPKTAAPSPSSSD 169
>TATB_ECOL6 (Q8FBI7) Sec-independent protein translocase protein tatB| Length = 171 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPRRGD 114 A ++ S P KPE P + PAA +A+P A P D Sbjct: 131 AQTQASSPEQKPETTPEPVVKPAA----DAEPKTAAPSPSSSD 169
>TATB_ECO57 (P69426) Sec-independent protein translocase protein tatB| Length = 171 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPRRGD 114 A ++ S P KPE P + PAA +A+P A P D Sbjct: 131 AQTQASSPEQKPETTPEPVVKPAA----DAEPKTAAPSPSSSD 169
>RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)| (Foocen) (Glut4 vesicle 20 kDa protein) Length = 1163 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 7/50 (14%) Frame = -3 Query: 239 PSETSGPNHKPEQRR---RPPISPAASASVEADPSAAPVDP----RRGDG 111 P+ P+ PE RPP P A AS A+P+A P P RRG G Sbjct: 121 PAAAVLPSKLPEDDEPPARPPPPPPAGASPLAEPAAPPSTPAAPKRRGSG 170
>EGR4_HUMAN (Q05215) Early growth response protein 4 (EGR-4) (AT133)| Length = 486 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -3 Query: 257 SKCLYAPSETSGPNHKPEQRRRPPISPAASA 165 S+CLY P + S P+ KP RR PP SPA A Sbjct: 169 SQCLYEP-QLSPPDVKPGLRR-PPASPALDA 197
>DHH1_CRYNV (Q58Z64) ATP-dependent RNA helicase VAD1 (EC 3.6.1.-) (Virulence| associated DEAD box protein 1) Length = 616 Score = 28.9 bits (63), Expect = 3.5 Identities = 12/40 (30%), Positives = 16/40 (40%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPR 123 AP++ GP P P ASA + P+ PR Sbjct: 512 APTQAQGPAQMQSPPSEPATQPQASAQIPVQGQTPPIQPR 551
>ECO_DROME (Q9VS50) N-acetyltransferase eco (EC 2.3.1.-) (Establishment of| cohesion 1 homolog) (ECO1 homolog) Length = 1052 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 Query: 236 SETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPRR 120 S+ NHKP++R+ P S + S +AD S +P R Sbjct: 365 SDEEASNHKPQKRQHPETSTPVAPSADAD-SGSPQSKMR 402
>RIR1_NEUCR (Q9UW15) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase large subunit) Length = 929 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 12/50 (24%) Frame = -3 Query: 239 PSETSGPNHKPE------QRRRPPISPAASASVEAD------PSAAPVDP 126 P+ T P PE R RP +SPA SA +AD P A DP Sbjct: 817 PASTPPPTEVPETLVQSDNRPRPLVSPAKSAGFKADLPEPESPKALATDP 866
>TBX2_HUMAN (Q13207) T-box transcription factor TBX2 (T-box protein 2)| Length = 702 Score = 28.5 bits (62), Expect = 4.5 Identities = 22/65 (33%), Positives = 29/65 (44%) Frame = +2 Query: 32 TESKRNSERSAGW*EAGEKGRNPRILTHPHGEGPLGLRSDLPQRLRLRRGRSEDDDAARA 211 TE +R ER + E+G+ P G+GP GLRS +R RR +AA Sbjct: 381 TEPERARER-----RSPERGKEP---AESGGDGPFGLRSLEKERAEARRKDEGRKEAAEG 432 Query: 212 YGLGL 226 GL Sbjct: 433 KEQGL 437
>FMN2_HUMAN (Q9NZ56) Formin-2 (Fragments)| Length = 632 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -3 Query: 260 LSKCLYAPSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPRRGDG 111 LS ++PS++ PN P +RRP S + + AAP R DG Sbjct: 31 LSSPNHSPSQS--PNQSPRIKRRPEPSLSRGSRTALASVAAPAKKHRADG 78
>MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor| RLTR1) Length = 257 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Frame = -3 Query: 275 LWHLNLSKCLYAPSE------TSGPNHKPEQRRRPPISPAASASVEADPSAA 138 +WH +L K L AP++ + G HK + + P + AA+ + SA+ Sbjct: 107 VWHTHLKKRLDAPAQGGHVAASGGKKHKKPKSAKKPAAAAAAPPASPERSAS 158
>P53_TUPGB (Q9TTA1) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 393 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -3 Query: 236 SETSGPNHKPEQ-RRRPPISPAASASVEADPSAAPVDP 126 +E GP+ P PP++PA +A A P+ AP P Sbjct: 55 TEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWP 92
>P53_HUMAN (P04637) Cellular tumor antigen p53 (Tumor suppressor p53)| (Phosphoprotein p53) (Antigen NY-CO-13) Length = 393 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -3 Query: 236 SETSGPNHKPEQ-RRRPPISPAASASVEADPSAAPVDP 126 +E GP+ P PP++PA +A A P+ AP P Sbjct: 55 TEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWP 92
>PH4H_PSEAE (P43334) Phenylalanine-4-hydroxylase (EC 1.14.16.1) (PAH)| (Phe-4-monooxygenase) Length = 262 Score = 28.5 bits (62), Expect = 4.5 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Frame = +2 Query: 95 NPRILTHPHGEGPLGLRSDLPQRLRLRR--------GRSEDDDAARAYGLGLMSQ-KEHI 247 NP H G LGL++ +R+ L R G E D R YG G++S KE + Sbjct: 132 NPWFAEFTHTYGKLGLKASKEERVFLARLYWMTIEFGLVETDQGKRIYGGGILSSPKETV 191 Query: 248 STWRD 262 + D Sbjct: 192 YSLSD 196
>Y593_TREPA (O83602) Hypothetical protein TP0593| Length = 677 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 107 LTHPHGEGPLGLRSDLPQRLRLRRGRSED 193 L H E ++ LP+RLR+RRGR D Sbjct: 425 LEHRRRETDAEMKKSLPRRLRIRRGRELD 453
>MARCS_HUMAN (P29966) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (Protein kinase C substrate, 80 kDa protein, light chain) (PKCSL) (80K-L protein) Length = 331 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 8/47 (17%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASA--------SVEADPSAAPVDP 126 APS +GP PEQ P PAA+A S EA P +P P Sbjct: 280 APS-AAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAP 325
>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) Length = 833 Score = 25.0 bits (53), Expect(2) = 5.7 Identities = 11/36 (30%), Positives = 15/36 (41%) Frame = +1 Query: 190 GRRRCSGLWFGPDVSEGAYKHLERLRCHKRCHIHPH 297 G RC +FG + + C +RC HPH Sbjct: 88 GECRCRHGYFGANCDTKCPRQFWGPDCKERCSCHPH 123 Score = 21.6 bits (44), Expect(2) = 5.7 Identities = 8/28 (28%), Positives = 14/28 (50%) Frame = +2 Query: 5 NPKGEAIAETESKRNSERSAGW*EAGEK 88 NP+G + T + AGW + G++ Sbjct: 39 NPRGRNVCRTPGSQVLTCCAGWRQLGDE 66
>MMPL3_MYCLE (O06081) Putative membrane protein mmpL3| Length = 955 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Frame = -3 Query: 224 GPNHKPEQRRRPPIS------PAASASVEADPSAAPVDP 126 G H P++RRRP +S P +AS+ A S P P Sbjct: 752 GEIHLPDERRRPTVSGRPVRPPVTAASLAAPASRVPRGP 790
>ATF4_MOUSE (Q06507) Cyclic AMP-dependent transcription factor ATF-4| (C/EBP-related ATF) (C/ATF) (TAXREB67 homolog) Length = 349 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/42 (28%), Positives = 15/42 (35%) Frame = -3 Query: 251 CLYAPSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDP 126 C+ S P H P R PP + + P P DP Sbjct: 221 CMSPESYLGSPQHSPSTSRAPPDNLPSPGGSRGSPRPKPYDP 262
>ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (EC 6.3.2.-)| (Itch) (Atrophin-1-interacting protein 4) (AIP4) (NFE2-associated polypeptide 1) (NAPP1) Length = 903 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = -3 Query: 242 APSETSG---PNHKPEQRRRPPISPAASASVEADPSA 141 +PS ++G P+ P R PP +P ASV PSA Sbjct: 240 SPSLSNGGFKPSRPPRPSRPPPPTPRRPASVNGSPSA 276
>TBX2_CANFA (Q863A2) T-box transcription factor TBX2 (T-box protein 2)| Length = 702 Score = 27.7 bits (60), Expect = 7.8 Identities = 22/64 (34%), Positives = 29/64 (45%) Frame = +2 Query: 32 TESKRNSERSAGW*EAGEKGRNPRILTHPHGEGPLGLRSDLPQRLRLRRGRSEDDDAARA 211 TE +R ER + E+G+ P G+GP GLRS +R RR DD + Sbjct: 380 TEPERARER-----RSPERGKEP---AESGGDGPFGLRSLEKERAEARR----KDDGRKE 427 Query: 212 YGLG 223 G G Sbjct: 428 AGEG 431
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 27.7 bits (60), Expect = 7.8 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -3 Query: 215 HKPEQRRRPPISPAASASVE 156 HKPE+ PP++P SA E Sbjct: 3748 HKPEEANEPPLNPHGSARAE 3767
>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 699 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -3 Query: 245 YAPSETSGPNHKPEQRRRPPISPAA--SASVEADPSAAPVD 129 + P TS P P+Q PP++ A A PSA+P+D Sbjct: 644 FCPHPTSPPPSLPQQGTTPPLALTAPPPAYATLGPSASPLD 684
>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)| Length = 3866 Score = 27.7 bits (60), Expect = 7.8 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -3 Query: 215 HKPEQRRRPPISPAASASVE 156 HKPE+ PP++P SA E Sbjct: 3645 HKPEEANEPPLNPHGSARAE 3664
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 27.7 bits (60), Expect = 7.8 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -3 Query: 242 APSETSGPNHKPEQRRRPPISPAASASVEADPSAAPVDPR 123 AP + GP H P +RPP SP+ A PS PR Sbjct: 124 APPPSHGPGHLPSHGQRPP-SPSHG---HAPPSGGHTPPR 159
>NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)| Length = 1426 Score = 27.7 bits (60), Expect = 7.8 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%) Frame = -3 Query: 248 LYAPSE-TSGPNHKPEQRRRPPISPAASAS----VEADPSAAPVDP 126 L AP+E SGP + R+PP SP++ + V A P +PV P Sbjct: 455 LDAPTEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAAPQNSPVGP 500 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,504,644 Number of Sequences: 219361 Number of extensions: 555036 Number of successful extensions: 2793 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2581 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2777 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
