>gb|BC108438.1| Xenopus laevis cDNA clone MGC:130662 IMAGE:7203189, complete cds
          Length = 1335

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 36 agagcaagaggaacagcgagaggag 60
          |||||| ||||||||||||||||||
Sbjct: 58 agagcaggaggaacagcgagaggag 34

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                           
Query: 236     aaggagcatataagcacttggagagattaagatgccataaaagatgccacattcaccctc 295
               |||||||||| ||||| || || |||| || | ||| |||||||||||||  ||||||||
Sbjct: 7696575 aaggagcatagaagcatttagacagatcaaaaggccgtaaaagatgccaccctcaccctc 7696516

                
Query: 296     a 296
               |
Sbjct: 7696515 a 7696515



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 184     atcggaggacgacgacgctgctcg 207
               |||||| |||||||||||||||||
Sbjct: 4774747 atcggaagacgacgacgctgctcg 4774724

>dbj|AK068944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170G22, full
           insert sequence
          Length = 4400

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 236 aaggagcatataagcacttggagagattaagatgccataaaagatgccacattcaccctc 295
           |||||||||| ||||| || || |||| || | ||| |||||||||||||  ||||||||
Sbjct: 450 aaggagcatagaagcatttagacagatcaaaaggccgtaaaagatgccaccctcaccctc 509

            
Query: 296 a 296
           |
Sbjct: 510 a 510

>emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 in linkage group 18,
             complete sequence
          Length = 214763

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 29    gagacggagagcaagaggaacagcgagag 57
             ||||||||||| |||||||| ||||||||
Sbjct: 79805 gagacggagagaaagaggaagagcgagag 79833

>gb|BC087532.1| Xenopus laevis hypothetical LOC496099, mRNA (cDNA clone
          IMAGE:7206093), partial cds
          Length = 1333

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 36 agagcaagaggaacagcgagaggag 60
          |||||| ||||||||||||||||||
Sbjct: 56 agagcaggaggaacagcgagaggag 32

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                           
Query: 236     aaggagcatataagcacttggagagattaagatgccataaaagatgccacattcaccctc 295
               |||||||||| ||||| || || |||| || | ||| |||||||||||||  ||||||||
Sbjct: 7696456 aaggagcatagaagcatttagacagatcaaaaggccgtaaaagatgccaccctcaccctc 7696397

                
Query: 296     a 296
               |
Sbjct: 7696396 a 7696396



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 184     atcggaggacgacgacgctgctcg 207
               |||||| |||||||||||||||||
Sbjct: 4774728 atcggaagacgacgacgctgctcg 4774705

>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151024

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 236   aaggagcatataagcacttggagagattaagatgccataaaagatgccacattcaccctc 295
             |||||||||| ||||| || || |||| || | ||| |||||||||||||  ||||||||
Sbjct: 83968 aaggagcatagaagcatttagacagatcaaaaggccgtaaaagatgccaccctcaccctc 83909

              
Query: 296   a 296
             |
Sbjct: 83908 a 83908

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 180      ggagatcggaggacgacgac 199
                ||||||||||||||||||||
Sbjct: 35239070 ggagatcggaggacgacgac 35239089

>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
              sequence
          Length = 156606

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    ggagatcggaggacgacgac 199
              ||||||||||||||||||||
Sbjct: 117831 ggagatcggaggacgacgac 117850

>gb|AC131703.3| Mus musculus BAC clone RP24-141B8 from chromosome 9, complete sequence
          Length = 135770

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   gatgccataaaagatgccac 285
             ||||||||||||||||||||
Sbjct: 65211 gatgccataaaagatgccac 65192

>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 264     aagatgccataaaagatgcc 283
               ||||||||||||||||||||
Sbjct: 3720705 aagatgccataaaagatgcc 3720724

>emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F13 on chromosome 1p33-34.3
             Contains the HEYL gene for hairy/enhancer-of-split related
             protein with YRPW-like motif, a novel gene, the NT5C1A
             gene for cytosolic IA 5'-nucleotidase, the HPCAL4 gene for
             hippocalcin like 4, a novel pseudogene, the 5' end of the
             PPIE gene for peptidylprolyl isomerase E (cyclophilin E)
             and six CpG islands, complete sequence
          Length = 154412

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    gcggggtggtaggaggcggg 81
             ||||||||||||||||||||
Sbjct: 98328 gcggggtggtaggaggcggg 98347

>emb|X15106.1|PHPPMYIII P.hybrida mitochondrial DNA region pPMYIII
          Length = 1994

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 23   atagccgagacggagagcaagagg 46
            |||||||||| |||||||||||||
Sbjct: 1771 atagccgagagggagagcaagagg 1748

>gb|AC166092.4| Glycine max clone gmw1-93l19, complete sequence
          Length = 51037

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   agggcgaaaccctagaattc 107
            ||||||||||||||||||||
Sbjct: 6998 agggcgaaaccctagaattc 7017

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 180      ggagatcggaggacgacgac 199
                ||||||||||||||||||||
Sbjct: 16373511 ggagatcggaggacgacgac 16373492

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 180      ggagatcggaggacgacgac 199
                ||||||||||||||||||||
Sbjct: 35329142 ggagatcggaggacgacgac 35329161

>gb|AF246633.1|AF246633 Mus Musculus type D-like endogenous retrovirus MusD2, complete
           sequence
          Length = 7398

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 gatgccataaaagatgccac 285
           ||||||||||||||||||||
Sbjct: 869 gatgccataaaagatgccac 888

>dbj|AP005448.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0404G11
          Length = 167623

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   ggagatcggaggacgacgac 199
             ||||||||||||||||||||
Sbjct: 14302 ggagatcggaggacgacgac 14283

>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0473C09
          Length = 141066

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   ggagatcggaggacgacgac 199
             ||||||||||||||||||||
Sbjct: 79567 ggagatcggaggacgacgac 79548

>dbj|AK066135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053F22, full
           insert sequence
          Length = 2529

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 ggagatcggaggacgacgac 199
           ||||||||||||||||||||
Sbjct: 127 ggagatcggaggacgacgac 108

>dbj|AB029061.1| Triticum turgidum subsp. dicoccoides waxy gene for starch synthase
            (GBSSI), complete cds
          Length = 2781

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 108  tcacccatccccacggcgag 127
            ||||||||||||||||||||
Sbjct: 1948 tcacccatccccacggcgag 1929

>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161762

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 184   atcggaggacgacgacgctgctcg 207
             |||||| |||||||||||||||||
Sbjct: 72384 atcggaagacgacgacgctgctcg 72407

>gb|AC132589.4| Mus musculus BAC clone RP24-258M24 from 1, complete sequence
          Length = 168097

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   catataagcacttggagaga 261
             ||||||||||||||||||||
Sbjct: 53577 catataagcacttggagaga 53596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,055,892
Number of Sequences: 3902068
Number of extensions: 2055892
Number of successful extensions: 40746
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40584
Number of HSP's gapped (non-prelim): 162
length of query: 298
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 276
effective length of database: 17,147,199,772
effective search space: 4732627137072
effective search space used: 4732627137072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)