>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)|
          Length = 596

 Score = 31.6 bits (70), Expect = 0.57
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +3

Query: 21  DQSENQRRQSESGEGRKREIDEDAQQNPIPHCSLARSPAAVRLRRSPGDSAPFTCLGIS 197
           D+ +    +SE       E   DA++ P  +     S   +RL +  GD   FT LG+S
Sbjct: 69  DEEQKNTEESEQEASDNEEEKSDAEETPAANGEDLPSADTIRLPQQDGDPVKFTELGLS 127

>FZD9_MOUSE (Q9R216) Frizzled 9 precursor (Frizzled-9) (Fz-9) (mFz9) (mFz3)|
          Length = 592

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 75  EIDEDAQQNPI-PHCSLARSPAAVRLRRSPGDSAP 176
           E  E+A   P  PH  L   P A R  R PGDSAP
Sbjct: 155 EAPENATAGPTEPHKGLGMLPVAPRPARPPGDSAP 189

>5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin|
           receptor 6) (ST-B17)
          Length = 436

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +1

Query: 127 ARPPPCGSDAPPGTPRHSPA---WESHLSAAAPWS 222
           ++P  C  + PPGTPRH P    W + LS    WS
Sbjct: 392 SQPSFCCLERPPGTPRHPPGPPLWSTSLSQTL-WS 425

>UPK3B_HUMAN (Q9BT76) Uroplakin-3B precursor (Uroplakin IIIb) (UPIIIb) (p35)|
          Length = 320

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +1

Query: 136 PPCGSDAP-PGTPRHSPAWESHLSAAAPWSRGRH 234
           P C +  P PG  R  P    HL+ AA W   RH
Sbjct: 196 PFCNAPLPGPGPYREDPRIHRHLARAAKWQHDRH 229

>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1857

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = +1

Query: 124  LARPPPCGSDAPPGTPRHSPAWE----SHLSAAAPWSR 225
            L  P P G+  PPG P  SP+ E    SH    AP S+
Sbjct: 1116 LQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQ 1153

>IF2P_YEAST (P39730) Eukaryotic translation initiation factor 5B (eIF-5B)|
           (Translation initiation factor IF-2)
          Length = 1002

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 21  DQSENQRRQSESGEGRKREIDEDAQQNPIPHCSLARSPAAVRLRRSPGDSAPFTCLGISS 200
           ++ +NQ  + E GE  + E +E A  + +   + A +PAA     +P  ++P      S 
Sbjct: 350 NEDQNQGEEEEEGEEEEEEEEERAHVHEVAKSTPAATPAAT---PTPSSASPNKKDLRSP 406

Query: 201 LCC 209
           +CC
Sbjct: 407 ICC 409

>PSAB_MESVI (Q9MUR7) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 178 SPAWESHL-SAAAPWSRGRH*RWD 246
           S AW  HL   A P SRG+H RWD
Sbjct: 187 SLAWTGHLIHVAIPESRGQHVRWD 210

>YD186_YEAST (P48568) Hypothetical 32.2 kDa protein in PPH22-VMA1 intergenic|
           region
          Length = 277

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 12  TRLDQSENQRRQSESGEGRKREIDEDAQQNPIP 110
           TR  Q+  +R+  E G+G +  I  D   NPIP
Sbjct: 191 TRTKQNPAERKVIEIGDGEELSIYRDVYSNPIP 223

>THIC_METKA (Q8TZ33) Thiamine biosynthesis protein thiC|
          Length = 429

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
 Frame = +3

Query: 3   GSQTRLDQSENQRRQSESGE--GRKREIDEDAQQNPIPHCSLARSPAAVRLRRSPGDSAP 176
           GS    + +   R     GE   R RE    A      H  L + PA VRL++   D AP
Sbjct: 231 GSVLDANDAAQHRELVVQGELVDRCREAGVQAMVEGPGHVPLDQIPAVVRLQKRVCDGAP 290

Query: 177 FTCLG 191
           F  LG
Sbjct: 291 FYVLG 295

>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 748

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +1

Query: 118 RSLARPPPCGSDAPPGTPRHSPAW--ESHLSAAAPWSRGRH 234
           R+  RPPP     P  TP H+P W   +   AA P   G H
Sbjct: 62  RAATRPPPL----PAHTPAHTPEWCGAASAEAAEPRRAGPH 98

>PSAB_MARPO (P06408) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +1

Query: 178 SPAWESHL-SAAAPWSRGRH*RWD 246
           S AW  HL   A P SRG H RWD
Sbjct: 187 SLAWTGHLVHVAIPESRGEHVRWD 210

>PSAB_HUPLU (Q5SD11) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +1

Query: 178 SPAWESHL-SAAAPWSRGRH*RWD 246
           S AW  HL   A P SRG H RWD
Sbjct: 187 SLAWTGHLVHVAIPESRGEHVRWD 210

>PSAB_ANTFO (Q85AV8) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +1

Query: 178 SPAWESHL-SAAAPWSRGRH*RWD 246
           S AW  HL   A P SRG H RWD
Sbjct: 187 SLAWAGHLIHVAIPESRGEHVRWD 210

>VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 374

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 133 PPPCGSDAPPGTPRHSPAWESHLSAAAP 216
           PPP G   PPG P    +   H + AAP
Sbjct: 172 PPPPGPPPPPGLPSSGVSGAGHGAGAAP 199

>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 57   GEGRKREIDEDAQQNPIPHCSLARSPAAVRLRRSPGDSAPFTCL 188
            G+ + R+ID   ++   P  +   +P  +R R  PGDS  F CL
Sbjct: 5908 GDRKPRDIDSSIREGKAPGFT---TPLTIR-RAKPGDSVTFECL 5947

>PSAB_CHLMO (P36492) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 735

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +1

Query: 178 SPAWESHL-SAAAPWSRGRH*RWD 246
           S AW  HL   A P SRGRH  WD
Sbjct: 188 SLAWTGHLVHVAIPESRGRHVGWD 211

>MYPC2_HUMAN (Q14324) Myosin-binding protein C, fast-type (Fast MyBP-C)|
           (C-protein, skeletal muscle fast-isoform)
          Length = 1142

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 115 ARSLARPPPCGSDAPPGTPRHSPAWESHLSA 207
           A+  A+  P G DAP G P+ +P  E+   A
Sbjct: 4   AKPAAKKAPKGKDAPKGAPKEAPPKEAPAEA 34

>WEE1_RAT (Q63802) Wee1-like protein kinase (EC 2.7.10.2)|
          Length = 646

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +3

Query: 30  ENQRRQSESGEGRKREIDEDAQQ--NPIPHCSLARSPA---AVRLRRSPG 164
           E +  + E G G     D   Q+  +P+P    ARSPA   A R RRSPG
Sbjct: 34  EEEEEEEEEGSGHSTGEDSAFQEPDSPLPS---ARSPAEAEAERRRRSPG 80

>WEE1_MOUSE (P47810) Wee1-like protein kinase (EC 2.7.10.2)|
          Length = 646

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +3

Query: 30  ENQRRQSESGEGRKREIDEDAQQ--NPIPHCSLARSPA---AVRLRRSPG 164
           E +  + E G G     D   Q+  +P+P    ARSPA   A R RRSPG
Sbjct: 34  EEEEEEEEEGSGHSTGEDSAFQEPDSPLPS---ARSPAEAEAERRRRSPG 80

>PSAB_EUGGR (P19431) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 734

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +1

Query: 178 SPAWESHL-SAAAPWSRGRH*RWD 246
           S AW  HL   A P SRG H RWD
Sbjct: 187 SLAWSGHLIHVAIPESRGIHVRWD 210

>ZFS1_SCHPO (P47979) Zinc-finger protein zfs1|
          Length = 404

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 191 SQAGEWRGVPGGASEPHGGGRAS 123
           S AG++R   G AS PHG G ++
Sbjct: 294 SAAGDFRQAKGSASHPHGSGSSN 316


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,997,047
Number of Sequences: 219361
Number of extensions: 510498
Number of successful extensions: 3692
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3564
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)