ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl33b10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF040700.1|AF040700 Oryza sativa methionyl-tRNA synthetase mRNA, complete cds Length = 2850 Score = 490 bits (247), Expect = e-135 Identities = 391/439 (89%) Strand = Plus / Plus Query: 50 aagcttccgatccccggtcgccgaaacatactcatcaccagcgcgctgccctacgtcaac 109 ||||| ||| ||||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 77 aagctgccggtccccggccgccgcaacatcctcgtcaccagcgcgctgccctacgtcaac 136 Query: 110 aacgtcccgcacctggggaacatcatcggatgcgtgctcagtgccgacgtgttcgcgcgg 169 |||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 137 aacgtccctcacctcgggaacatcatcggctgcgtgctcagcgccgacgtattcgcgcgc 196 Query: 170 tactgccgactgcgggggtacaacgctatctacatatgcggcacggacgagtacgggacg 229 |||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 197 tactgccggctgcggggctacaacgtcatctacatatgcggcaccgacgagtacgggacg 256 Query: 230 gccaccgagaccaaggccttggaggagaagtgctcgcccaaggagatctgtgacaagtac 289 |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 257 gccaccgagaccaaggccatggaggagaagtgctcgcccaaggagatctgcgacaagtat 316 Query: 290 catgttatccatgacgaggtttacaagtggtttgacataaagtttgacaagtttgggcgg 349 |||| | ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 317 catgctgtccatagtgaggtttacaaatggtttgacataaagtttgacaagtttggacgg 376 Query: 350 acatctgctcctgaacagacagaagtctgccaggcaatttttcataaattgatggaaaac 409 ||||| |||| ||||||| ||||||||||| |||||||| || || |||||||||||| Sbjct: 377 acatcctctccccaacagactgaagtctgccaagcaattttccaaaagttgatggaaaac 436 Query: 410 aaatggctcacagagaataccatgcagcagctttattgtgacacatgtgagcgattctta 469 || ||||||||||| || |||||||||||||| || ||||| || || | ||||| ||| Sbjct: 437 aattggctcacagaaaacaccatgcagcagctgtactgtgatacttgccaacgattttta 496 Query: 470 gccgataggctcgtggagg 488 || |||||||||||||||| Sbjct: 497 gcggataggctcgtggagg 515
>gb|AY109485.1| Zea mays CL580_1 mRNA sequence Length = 2647 Score = 365 bits (184), Expect = 9e-98 Identities = 328/376 (87%) Strand = Plus / Plus Query: 56 ccgatccccggtcgccgaaacatactcatcaccagcgcgctgccctacgtcaacaacgtc 115 ||||| ||||| ||||| |||||||||||||| ||||| || | |||||||| || ||| Sbjct: 4 ccgattcccggacgccgcaacatactcatcactagcgcacttgcgtacgtcaataatgtc 63 Query: 116 ccgcacctggggaacatcatcggatgcgtgctcagtgccgacgtgttcgcgcggtactgc 175 |||||||| |||||||||||||| || |||||||| || ||||||| |||||||||||| Sbjct: 64 ccgcacctagggaacatcatcggctgggtgctcagcgcagacgtgtacgcgcggtactgt 123 Query: 176 cgactgcgggggtacaacgctatctacatatgcggcacggacgagtacgggacggccacc 235 || ||| | ||||||||||||||||||||||| ||||||||||| || || |||||| Sbjct: 124 tttctccggcgctacaacgctatctacatatgcgggacggacgagtatggcaccgccacc 183 Query: 236 gagaccaaggccttggaggagaagtgctcgcccaaggagatctgtgacaagtaccatgtt 295 || || |||||| |||||||||||||| |||||||||||||||| || |||||||||| | Sbjct: 184 gaaacgaaggccatggaggagaagtgcacgcccaaggagatctgcgataagtaccatgct 243 Query: 296 atccatgacgaggtttacaagtggtttgacataaagtttgacaagtttgggcggacatct 355 ||||| | || ||||||||||||||| ||||||| |||||||||||||| ||||| ||| Sbjct: 244 atccacaatgaagtttacaagtggtttaacataaaatttgacaagtttggacggacctct 303 Query: 356 gctcctgaacagacagaagtctgccaggcaatttttcataaattgatggaaaacaaatgg 415 ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 304 tctcctgagcagacagaagtctgccatgcaattttccataaattgatggaaaacaattgg 363 Query: 416 ctcacagagaatacca 431 |||||||| ||||||| Sbjct: 364 ctcacagaaaatacca 379
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 220 bits (111), Expect = 3e-54 Identities = 138/147 (93%) Strand = Plus / Minus Query: 141 gcgtgctcagtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatct 200 |||||||||| ||||||||||||||||| |||||||| |||||||| ||||||| |||| Sbjct: 17936117 gcgtgctcagcgccgacgtgttcgcgcgctactgccggctgcggggctacaacgtcatct 17936058 Query: 201 acatatgcggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaagt 260 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 17936057 acatatgcggcaccgacgagtacgggacggccaccgagaccaaggccatggaggagaagt 17935998 Query: 261 gctcgcccaaggagatctgtgacaagt 287 ||||||||||||||||||| ||||||| Sbjct: 17935997 gctcgcccaaggagatctgcgacaagt 17935971 Score = 157 bits (79), Expect = 4e-35 Identities = 121/135 (89%) Strand = Plus / Minus Query: 305 gaggtttacaagtggtttgacataaagtttgacaagtttgggcggacatctgctcctgaa 364 ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 17935464 gaggtttacaaatggtttgacataaagtttgacaagtttggacggacatcctctccccaa 17935405 Query: 365 cagacagaagtctgccaggcaatttttcataaattgatggaaaacaaatggctcacagag 424 ||||| ||||||||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 17935404 cagactgaagtctgccaagcaattttccaaaagttgatggaaaacaattggctcacagaa 17935345 Query: 425 aataccatgcagcag 439 || |||||||||||| Sbjct: 17935344 aacaccatgcagcag 17935330 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 50 aagcttccgatccccggtcgccgaaacatactcatcaccagcgcgctgccctacgtcaac 109 ||||| ||| ||||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 17936331 aagctgccggtccccggccgccgcaacatcctcgtcaccagcgcgctgccctacgtcaac 17936272 Query: 110 aacgtcccgcacctggggaacatcatcgg 138 |||||||| ||||| |||||||||||||| Sbjct: 17936271 aacgtccctcacctcgggaacatcatcgg 17936243 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 461 cgattcttagccgataggctcgtggagg 488 ||||| ||||| |||||||||||||||| Sbjct: 17935227 cgatttttagcggataggctcgtggagg 17935200
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 220 bits (111), Expect = 3e-54 Identities = 138/147 (93%) Strand = Plus / Minus Query: 141 gcgtgctcagtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatct 200 |||||||||| ||||||||||||||||| |||||||| |||||||| ||||||| |||| Sbjct: 2423 gcgtgctcagcgccgacgtgttcgcgcgctactgccggctgcggggctacaacgtcatct 2364 Query: 201 acatatgcggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaagt 260 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2363 acatatgcggcaccgacgagtacgggacggccaccgagaccaaggccatggaggagaagt 2304 Query: 261 gctcgcccaaggagatctgtgacaagt 287 ||||||||||||||||||| ||||||| Sbjct: 2303 gctcgcccaaggagatctgcgacaagt 2277 Score = 157 bits (79), Expect = 4e-35 Identities = 121/135 (89%) Strand = Plus / Minus Query: 305 gaggtttacaagtggtttgacataaagtttgacaagtttgggcggacatctgctcctgaa 364 ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 1770 gaggtttacaaatggtttgacataaagtttgacaagtttggacggacatcctctccccaa 1711 Query: 365 cagacagaagtctgccaggcaatttttcataaattgatggaaaacaaatggctcacagag 424 ||||| ||||||||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 1710 cagactgaagtctgccaagcaattttccaaaagttgatggaaaacaattggctcacagaa 1651 Query: 425 aataccatgcagcag 439 || |||||||||||| Sbjct: 1650 aacaccatgcagcag 1636 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 50 aagcttccgatccccggtcgccgaaacatactcatcaccagcgcgctgccctacgtcaac 109 ||||| ||| ||||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 2637 aagctgccggtccccggccgccgcaacatcctcgtcaccagcgcgctgccctacgtcaac 2578 Query: 110 aacgtcccgcacctggggaacatcatcgg 138 |||||||| ||||| |||||||||||||| Sbjct: 2577 aacgtccctcacctcgggaacatcatcgg 2549 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 461 cgattcttagccgataggctcgtggagg 488 ||||| ||||| |||||||||||||||| Sbjct: 1533 cgatttttagcggataggctcgtggagg 1506
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 220 bits (111), Expect = 3e-54 Identities = 138/147 (93%) Strand = Plus / Minus Query: 141 gcgtgctcagtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatct 200 |||||||||| ||||||||||||||||| |||||||| |||||||| ||||||| |||| Sbjct: 141306 gcgtgctcagcgccgacgtgttcgcgcgctactgccggctgcggggctacaacgtcatct 141247 Query: 201 acatatgcggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaagt 260 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141246 acatatgcggcaccgacgagtacgggacggccaccgagaccaaggccatggaggagaagt 141187 Query: 261 gctcgcccaaggagatctgtgacaagt 287 ||||||||||||||||||| ||||||| Sbjct: 141186 gctcgcccaaggagatctgcgacaagt 141160 Score = 157 bits (79), Expect = 4e-35 Identities = 121/135 (89%) Strand = Plus / Minus Query: 305 gaggtttacaagtggtttgacataaagtttgacaagtttgggcggacatctgctcctgaa 364 ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 140653 gaggtttacaaatggtttgacataaagtttgacaagtttggacggacatcctctccccaa 140594 Query: 365 cagacagaagtctgccaggcaatttttcataaattgatggaaaacaaatggctcacagag 424 ||||| ||||||||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 140593 cagactgaagtctgccaagcaattttccaaaagttgatggaaaacaattggctcacagaa 140534 Query: 425 aataccatgcagcag 439 || |||||||||||| Sbjct: 140533 aacaccatgcagcag 140519 Score = 113 bits (57), Expect = 5e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 50 aagcttccgatccccggtcgccgaaacatactcatcaccagcgcgctgccctacgtcaac 109 ||||| ||| ||||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 141520 aagctgccggtccccggccgccgcaacatcctcgtcaccagcgcgctgccctacgtcaac 141461 Query: 110 aacgtcccgcacctggggaacatcatcgg 138 |||||||| ||||| |||||||||||||| Sbjct: 141460 aacgtccctcacctcgggaacatcatcgg 141432 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 461 cgattcttagccgataggctcgtggagg 488 ||||| ||||| |||||||||||||||| Sbjct: 140416 cgatttttagcggataggctcgtggagg 140389
>ref|NM_196374.1| Oryza sativa (japonica cultivar-group) putative methionyl-tRNA synthetase (OSJNBa0050N08.15), mRNA Length = 1791 Score = 176 bits (89), Expect = 4e-41 Identities = 176/205 (85%) Strand = Plus / Plus Query: 89 agcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgcgtgctc 148 ||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 61 agcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctc 120 Query: 149 agtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatctacatatgc 208 ||||||| |||||||| |||||||| || |||||| |||||| ||||| | ||| Sbjct: 121 tccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgc 180 Query: 209 ggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaagtgctcgccc 268 ||||| ||||||||||| || |||||||||||||||||| ||||||| ||||| ||| Sbjct: 181 ggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctccccc 240 Query: 269 aaggagatctgtgacaagtaccatg 293 | ||||||||| ||||||||||||| Sbjct: 241 agggagatctgcgacaagtaccatg 265
>dbj|AK067274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H24, full insert sequence Length = 2243 Score = 176 bits (89), Expect = 4e-41 Identities = 176/205 (85%) Strand = Plus / Plus Query: 89 agcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgcgtgctc 148 ||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 266 agcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctc 325 Query: 149 agtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatctacatatgc 208 ||||||| |||||||| |||||||| || |||||| |||||| ||||| | ||| Sbjct: 326 tccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgc 385 Query: 209 ggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaagtgctcgccc 268 ||||| ||||||||||| || |||||||||||||||||| ||||||| ||||| ||| Sbjct: 386 ggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctccccc 445 Query: 269 aaggagatctgtgacaagtaccatg 293 | ||||||||| ||||||||||||| Sbjct: 446 agggagatctgcgacaagtaccatg 470
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 165 bits (83), Expect = 2e-37 Identities = 170/199 (85%) Strand = Plus / Plus Query: 89 agcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgcgtgctc 148 ||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 76678 agcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctc 76737 Query: 149 agtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatctacatatgc 208 ||||||| |||||||| |||||||| || |||||| |||||| ||||| | ||| Sbjct: 76738 tccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgc 76797 Query: 209 ggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaagtgctcgccc 268 ||||| ||||||||||| || |||||||||||||||||| ||||||| ||||| ||| Sbjct: 76798 ggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctccccc 76857 Query: 269 aaggagatctgtgacaagt 287 | ||||||||| ||||||| Sbjct: 76858 agggagatctgcgacaagt 76876
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 165 bits (83), Expect = 2e-37 Identities = 170/199 (85%) Strand = Plus / Plus Query: 89 agcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgcgtgctc 148 ||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 12977762 agcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctc 12977821 Query: 149 agtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatctacatatgc 208 ||||||| |||||||| |||||||| || |||||| |||||| ||||| | ||| Sbjct: 12977822 tccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgc 12977881 Query: 209 ggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaagtgctcgccc 268 ||||| ||||||||||| || |||||||||||||||||| ||||||| ||||| ||| Sbjct: 12977882 ggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctccccc 12977941 Query: 269 aaggagatctgtgacaagt 287 | ||||||||| ||||||| Sbjct: 12977942 agggagatctgcgacaagt 12977960
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 165 bits (83), Expect = 2e-37 Identities = 170/199 (85%) Strand = Plus / Plus Query: 89 agcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgcgtgctc 148 ||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 12985102 agcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctc 12985161 Query: 149 agtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatctacatatgc 208 ||||||| |||||||| |||||||| || |||||| |||||| ||||| | ||| Sbjct: 12985162 tccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgc 12985221 Query: 209 ggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaagtgctcgccc 268 ||||| ||||||||||| || |||||||||||||||||| ||||||| ||||| ||| Sbjct: 12985222 ggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctccccc 12985281 Query: 269 aaggagatctgtgacaagt 287 | ||||||||| ||||||| Sbjct: 12985282 agggagatctgcgacaagt 12985300
>ref|NM_117452.3| Arabidopsis thaliana ATP binding / methionine-tRNA ligase/ tRNA binding / tRNA ligase AT4G13780 mRNA, complete cds Length = 2640 Score = 113 bits (57), Expect = 5e-22 Identities = 294/373 (78%) Strand = Plus / Plus Query: 72 gaaacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaaca 131 |||| ||||| |||||||| || |||| |||||||||||||| || || || || |||| Sbjct: 132 gaaatatactaatcaccagtgctttgccttacgtcaacaacgttcctcatctcggaaaca 191 Query: 132 tcatcggatgcgtgctcagtgccgacgtgttcgcgcggtactgccgactgcgggggtaca 191 |||||||||| || || || || || |||| || | ||||| || || || || || | Sbjct: 192 tcatcggatgtgttctgagcgctgatgtgtatgctagatactgtcgtctccgtggctata 251 Query: 192 acgctatctacatatgcggcacggacgagtacgggacggccaccgagaccaaggccttgg 251 | || || |||||||| || || || || || ||||| || || |||||||| || |||| Sbjct: 252 atgcgatttacatatgtggaaccgatgaatatgggactgcaactgagaccaaagctttgg 311 Query: 252 aggagaagtgctcgcccaaggagatctgtgacaagtaccatgttatccatgacgaggttt 311 ||||||| ||| | |||||||| ||||||||||||||||||| || ||| | || |||| Sbjct: 312 aggagaattgcacccccaaggaaatctgtgacaagtaccatgccattcataaagaagttt 371 Query: 312 acaagtggtttgacataaagtttgacaagtttgggcggacatctgctcctgaacagacag 371 | | ||||||| |||| ||||||||||||||||| || || |||| |||||||| | Sbjct: 372 atgactggtttggtataagttttgacaagtttgggcgaacttcaactccagaacagactg 431 Query: 372 aagtctgccaggcaatttttcataaattgatggaaaacaaatggctcacagagaatacca 431 | || ||||| |||||||| | || ||| ||| ||||| ||||| ||||||| |||| Sbjct: 432 aggtgtgccaagcaattttcaacaagttgtgggacaacaagtggctttcagagaacacca 491 Query: 432 tgcagcagcttta 444 ||||||||||||| Sbjct: 492 tgcagcagcttta 504
>gb|AY091454.1| Arabidopsis thaliana putative methionyl-tRNA synthetase (At4g13780) mRNA, complete cds Length = 2425 Score = 113 bits (57), Expect = 5e-22 Identities = 294/373 (78%) Strand = Plus / Plus Query: 72 gaaacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaaca 131 |||| ||||| |||||||| || |||| |||||||||||||| || || || || |||| Sbjct: 50 gaaatatactaatcaccagtgctttgccttacgtcaacaacgttcctcatctcggaaaca 109 Query: 132 tcatcggatgcgtgctcagtgccgacgtgttcgcgcggtactgccgactgcgggggtaca 191 |||||||||| || || || || || |||| || | ||||| || || || || || | Sbjct: 110 tcatcggatgtgttctgagcgctgatgtgtatgctagatactgtcgtctccgtggctata 169 Query: 192 acgctatctacatatgcggcacggacgagtacgggacggccaccgagaccaaggccttgg 251 | || || |||||||| || || || || || ||||| || || |||||||| || |||| Sbjct: 170 atgcgatttacatatgtggaaccgatgaatatgggactgcaactgagaccaaagctttgg 229 Query: 252 aggagaagtgctcgcccaaggagatctgtgacaagtaccatgttatccatgacgaggttt 311 ||||||| ||| | |||||||| ||||||||||||||||||| || ||| | || |||| Sbjct: 230 aggagaattgcacccccaaggaaatctgtgacaagtaccatgccattcataaagaagttt 289 Query: 312 acaagtggtttgacataaagtttgacaagtttgggcggacatctgctcctgaacagacag 371 | | ||||||| |||| ||||||||||||||||| || || |||| |||||||| | Sbjct: 290 atgactggtttggtataagttttgacaagtttgggcgaacttcaactccagaacagactg 349 Query: 372 aagtctgccaggcaatttttcataaattgatggaaaacaaatggctcacagagaatacca 431 | || ||||| |||||||| | || ||| ||| ||||| ||||| ||||||| |||| Sbjct: 350 aggtgtgccaagcaattttcaacaagttgtgggacaacaagtggctttcagagaacacca 409 Query: 432 tgcagcagcttta 444 ||||||||||||| Sbjct: 410 tgcagcagcttta 422
>gb|AY064009.1| Arabidopsis thaliana putative methionyl-tRNA synthetase (At4g13780) mRNA, complete cds Length = 2656 Score = 113 bits (57), Expect = 5e-22 Identities = 294/373 (78%) Strand = Plus / Plus Query: 72 gaaacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaaca 131 |||| ||||| |||||||| || |||| |||||||||||||| || || || || |||| Sbjct: 132 gaaatatactaatcaccagtgctttgccttacgtcaacaacgttcctcatctcggaaaca 191 Query: 132 tcatcggatgcgtgctcagtgccgacgtgttcgcgcggtactgccgactgcgggggtaca 191 |||||||||| || || || || || |||| || | ||||| || || || || || | Sbjct: 192 tcatcggatgtgttctgagcgctgatgtgtatgctagatactgtcgtctccgtggctata 251 Query: 192 acgctatctacatatgcggcacggacgagtacgggacggccaccgagaccaaggccttgg 251 | || || |||||||| || || || || || ||||| || || |||||||| || |||| Sbjct: 252 atgcgatttacatatgtggaaccgatgaatatgggactgcaactgagaccaaagctttgg 311 Query: 252 aggagaagtgctcgcccaaggagatctgtgacaagtaccatgttatccatgacgaggttt 311 ||||||| ||| | |||||||| ||||||||||||||||||| || ||| | || |||| Sbjct: 312 aggagaattgcacccccaaggaaatctgtgacaagtaccatgccattcataaagaagttt 371 Query: 312 acaagtggtttgacataaagtttgacaagtttgggcggacatctgctcctgaacagacag 371 | | ||||||| |||| ||||||||||||||||| || || |||| |||||||| | Sbjct: 372 atgactggtttggtataagttttgacaagtttgggcgaacttcaactccagaacagactg 431 Query: 372 aagtctgccaggcaatttttcataaattgatggaaaacaaatggctcacagagaatacca 431 | || ||||| |||||||| | || ||| ||| ||||| ||||| ||||||| |||| Sbjct: 432 aggtgtgccaagcaattttcaacaagttgtgggacaacaagtggctttcagagaacacca 491 Query: 432 tgcagcagcttta 444 ||||||||||||| Sbjct: 492 tgcagcagcttta 504
>gb|BC111362.1| Bos taurus cDNA clone MGC:134096 IMAGE:8048743, complete cds Length = 2897 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 |||||||||||||| || || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 853 ctcatcaccagcgccctcccttacgtcaacaacgtcccccaccttggaaacatcatcggc 912 Query: 140 tgcgtgctcagtgccgacgt 159 || ||||||||||||||||| Sbjct: 913 tgtgtgctcagtgccgacgt 932
>ref|NM_001038091.1| Bos taurus similar to methionine-tRNA synthetase (MGC134096), mRNA Length = 2897 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 |||||||||||||| || || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 853 ctcatcaccagcgccctcccttacgtcaacaacgtcccccaccttggaaacatcatcggc 912 Query: 140 tgcgtgctcagtgccgacgt 159 || ||||||||||||||||| Sbjct: 913 tgtgtgctcagtgccgacgt 932
>emb|CR352777.1| Gallus gallus finished cDNA, clone ChEST432g11 Length = 878 Score = 83.8 bits (42), Expect = 5e-13 Identities = 141/174 (81%) Strand = Plus / Plus Query: 83 atcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgc 142 ||||||||||| ||||||||||||||||||| || |||||||| |||||||| || || Sbjct: 436 atcaccagcgccttgccctacgtcaacaacgtgccccacctgggcaacatcattggctgt 495 Query: 143 gtgctcagtgccgacgtgttcgcgcggtactgccgactgcgggggtacaacgctatctac 202 || ||||| || |||| ||||| |||||||||| |||||| | ||| | | ||| Sbjct: 496 gtcctcagcgctgacgccttcgccaggtactgccgcctgcggaactggaacacgctgtac 555 Query: 203 atatgcggcacggacgagtacgggacggccaccgagaccaaggccttggaggag 256 | |||||||| ||||||||||| || |||||||||||||| || |||||||| Sbjct: 556 gtgtgcggcaccgacgagtacggcacagccaccgagaccaaagcagtggaggag 609
>gb|AY423024.1| Danio rerio methionine-tRNA synthetase (MARS) mRNA, complete cds Length = 3191 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 83 atcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgc 142 ||||||||||| || || || |||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 977 atcaccagcgctctcccgtatgtcaacaatgtgccgcatctgggaaacatcatcggctgc 1036 Query: 143 gtgctcagtgccgacgtgttcgc 165 || |||||||| ||||||||||| Sbjct: 1037 gtcctcagtgctgacgtgttcgc 1059 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 200 tacatatgcggcacggacgagtacgggacggccaccgaga 239 ||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 1094 tacatctgcgggacggatgaatacggcacggccaccgaga 1133
>gb|AY648846.1| Danio rerio methionine-tRNA synthetase mRNA, complete cds Length = 3151 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 83 atcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgc 142 ||||||||||| || || || |||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 977 atcaccagcgctctcccgtatgtcaacaatgtgccgcatctgggaaacatcatcggctgc 1036 Query: 143 gtgctcagtgccgacgtgttcgc 165 || |||||||| ||||||||||| Sbjct: 1037 gtcctcagtgctgacgtgttcgc 1059 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 200 tacatatgcggcacggacgagtacgggacggccaccgaga 239 ||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 1094 tacatctgcgggacggatgaatacggcacggccaccgaga 1133
>gb|BC057463.1| Danio rerio methionine-tRNA synthetase, mRNA (cDNA clone MGC:66122 IMAGE:2639182), complete cds Length = 3143 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 83 atcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgc 142 ||||||||||| || || || |||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 958 atcaccagcgctctcccgtatgtcaacaatgtgccgcatctgggaaacatcatcggctgc 1017 Query: 143 gtgctcagtgccgacgtgttcgc 165 || |||||||| ||||||||||| Sbjct: 1018 gtcctcagtgctgacgtgttcgc 1040 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 200 tacatatgcggcacggacgagtacgggacggccaccgaga 239 ||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 1075 tacatctgcgggacggatgaatacggcacggccaccgaga 1114
>gb|BC046899.1| Danio rerio methionine-tRNA synthetase, mRNA (cDNA clone IMAGE:3818335), partial cds Length = 3151 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 83 atcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgc 142 ||||||||||| || || || |||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 977 atcaccagcgctctcccgtatgtcaacaatgtgccgcatctgggaaacatcatcggctgc 1036 Query: 143 gtgctcagtgccgacgtgttcgc 165 || |||||||| ||||||||||| Sbjct: 1037 gtcctcagtgctgacgtgttcgc 1059 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 200 tacatatgcggcacggacgagtacgggacggccaccgaga 239 ||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 1094 tacatctgcgggacggatgaatacggcacggccaccgaga 1133
>emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22, complete sequence Length = 171896 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 83 atcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgc 142 ||||||||||| || || || |||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 131668 atcaccagcgctctcccgtatgtcaacaatgtgccgcatctgggaaacatcatcggctgc 131609 Query: 143 gtgctcagtgccgacgtgttcgc 165 || |||||||| ||||||||||| Sbjct: 131608 gtcctcagtgctgacgtgttcgc 131586 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 200 tacatatgcggcacggacgagtacgggacggccaccgaga 239 ||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 130301 tacatctgcgggacggatgaatacggcacggccaccgaga 130262
>ref|NM_200076.1| Danio rerio methionine-tRNA synthetase (mars), mRNA Length = 3191 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 83 atcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcggatgc 142 ||||||||||| || || || |||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 977 atcaccagcgctctcccgtatgtcaacaatgtgccgcatctgggaaacatcatcggctgc 1036 Query: 143 gtgctcagtgccgacgtgttcgc 165 || |||||||| ||||||||||| Sbjct: 1037 gtcctcagtgctgacgtgttcgc 1059 Score = 40.1 bits (20), Expect = 6.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 200 tacatatgcggcacggacgagtacgggacggccaccgaga 239 ||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 1094 tacatctgcgggacggatgaatacggcacggccaccgaga 1133
>ref|XM_959545.1| Neurospora crassa OR74A hypothetical protein (NCU07451.1) partial mRNA Length = 1992 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 74 aacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatc 133 ||||| ||||||||||| || ||||||||||||||||||||||| || ||||| |||||| Sbjct: 46 aacatcctcatcaccagtgccctgccctacgtcaacaacgtcccccatctgggcaacatc 105 Query: 134 at 135 || Sbjct: 106 at 107
>ref|XM_327736.1| Neurospora crassa OR74A hypothetical protein (NCU07451.1) partial mRNA Length = 1992 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 74 aacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatc 133 ||||| ||||||||||| || ||||||||||||||||||||||| || ||||| |||||| Sbjct: 46 aacatcctcatcaccagtgccctgccctacgtcaacaacgtcccccatctgggcaacatc 105 Query: 134 at 135 || Sbjct: 106 at 107
>ref|XM_509164.1| PREDICTED: Pan troglodytes similar to methionine-tRNA synthetase; methionyl-tRNA synthetase; methionine tRNA ligase (LOC452016), mRNA Length = 2780 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 799 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 858 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 859 tgtgtgctcagtgccga 875
>gb|BC065187.1| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone IMAGE:5021529), partial cds Length = 2830 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 834 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 893 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 894 tgtgtgctcagtgccga 910
>ref|NM_004990.2| Homo sapiens methionine-tRNA synthetase (MARS), mRNA Length = 2795 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 822 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 881 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 882 tgtgtgctcagtgccga 898
>emb|X94754.1|HSYMTRNH H.sapiens mRNA for yeast methionyl-tRNA synthetase homologue Length = 2779 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 806 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 865 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 866 tgtgtgctcagtgccga 882
>gb|BT007338.1| Homo sapiens methionine-tRNA synthetase mRNA, complete cds Length = 2703 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 799 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 858 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 859 tgtgtgctcagtgccga 875
>dbj|AK122956.1| Homo sapiens cDNA FLJ16674 fis, clone THYMU3008136, highly similar to Methionyl-tRNA synthetase (EC 6.1.1.10) Length = 3574 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 1485 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 1544 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 1545 tgtgtgctcagtgccga 1561
>gb|BC015011.1|BC015011 Homo sapiens, methionine-tRNA synthetase, clone IMAGE:4864644, mRNA, partial cds Length = 2790 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 797 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 856 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 857 tgtgtgctcagtgccga 873
>dbj|AK222767.1| Homo sapiens mRNA for methionine-tRNA synthetase variant, clone: HEP00371 Length = 2738 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 819 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 878 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 879 tgtgtgctcagtgccga 895
>gb|AC022506.38| Homo sapiens 12 BAC RP11-181L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172136 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 109901 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 109842 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 109841 tgtgtgctcagtgccga 109825
>gb|AY889906.1| Synthetic construct Homo sapiens clone FLH022775.01X methionine-tRNA synthetase (MARS) mRNA, complete cds Length = 2703 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 799 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 858 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 859 tgtgtgctcagtgccga 875
>gb|BC011639.2| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone MGC:12828 IMAGE:4120680), complete cds Length = 2799 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 807 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 866 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 867 tgtgtgctcagtgccga 883
>gb|BC011849.2| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone MGC:20313 IMAGE:4135154), complete cds Length = 2800 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 805 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 864 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 865 tgtgtgctcagtgccga 881
>gb|BC002384.2| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone MGC:8646 IMAGE:2961615), complete cds Length = 2799 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 805 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 864 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 865 tgtgtgctcagtgccga 881
>gb|BC006328.2| Homo sapiens methionine-tRNA synthetase, mRNA (cDNA clone MGC:12889 IMAGE:4139330), complete cds Length = 2795 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 805 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 864 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 865 tgtgtgctcagtgccga 881
>dbj|D84224.1| Homo sapiens mRNA for methionyl tRNA synthetase, complete cds Length = 2800 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || || ||||||||||| ||||| ||||| ||||||||||| || Sbjct: 822 ctcatcaccagtgccctcccttacgtcaacaatgtcccccaccttgggaacatcattggt 881 Query: 140 tgcgtgctcagtgccga 156 || |||||||||||||| Sbjct: 882 tgtgtgctcagtgccga 898
>gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete sequence Length = 124550 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 |||||||| |||||| |||||||||||||||||||||| || || || |||||||| ||| Sbjct: 86450 ctcatcacaagcgcgttgccctacgtcaacaacgtccctcatctcggcaacatcattgga 86391 Query: 140 tg 141 || Sbjct: 86390 tg 86389
>ref|XM_754585.1| Ustilago maydis 521 hypothetical protein (UM03531.1) partial mRNA Length = 2505 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 198 tctacatatgcggcacggacgagtacgggacggccaccgagaccaaggccttgga 252 ||||||| |||||||| ||||| ||||| || ||||||||||| ||||||||||| Sbjct: 572 tctacatctgcggcacagacgaatacggtactgccaccgagacaaaggccttgga 626 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 92 gcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgg 138 |||||||| ||||||||||| ||||| || || || ||||||||||| Sbjct: 466 gcgctgccttacgtcaacaatgtcccacatctcggcaacatcatcgg 512
>gb|AC144852.3| Mus musculus BAC clone RP24-341K21 from chromosome 10, complete sequence Length = 169565 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 2207 ctcatcaccagtgccctcccctatgtcaacaatgtcccccaccttggaaacatcattggc 2266 Query: 140 tgcgtgctcagtgc 153 || ||||||||||| Sbjct: 2267 tgtgtgctcagtgc 2280 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 atctgtgacaagtaccatgttatccatg 302 ||||||||||||||||||| ||||||| Sbjct: 2517 atctgtgacaagtaccatgccatccatg 2544
>gb|BC079643.1| Mus musculus methionine-tRNA synthetase, mRNA (cDNA clone MGC:90747 IMAGE:6416029), complete cds Length = 2822 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 815 ctcatcaccagtgccctcccctatgtcaacaatgtcccccaccttggaaacatcattggc 874 Query: 140 tgcgtgctcagtgc 153 || ||||||||||| Sbjct: 875 tgtgtgctcagtgc 888 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 atctgtgacaagtaccatgttatccatg 302 ||||||||||||||||||| ||||||| Sbjct: 1010 atctgtgacaagtaccatgccatccatg 1037
>gb|AC114678.20| Mus musculus chromosome 10, clone RP24-213L12, complete sequence Length = 180079 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 151621 ctcatcaccagtgccctcccctatgtcaacaatgtcccccaccttggaaacatcattggc 151680 Query: 140 tgcgtgctcagtgc 153 || ||||||||||| Sbjct: 151681 tgtgtgctcagtgc 151694 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 atctgtgacaagtaccatgttatccatg 302 ||||||||||||||||||| ||||||| Sbjct: 151931 atctgtgacaagtaccatgccatccatg 151958
>ref|NM_001003913.1| Mus musculus methionine-tRNA synthetase (Mars), mRNA Length = 2822 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 815 ctcatcaccagtgccctcccctatgtcaacaatgtcccccaccttggaaacatcattggc 874 Query: 140 tgcgtgctcagtgc 153 || ||||||||||| Sbjct: 875 tgtgtgctcagtgc 888 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 atctgtgacaagtaccatgttatccatg 302 ||||||||||||||||||| ||||||| Sbjct: 1010 atctgtgacaagtaccatgccatccatg 1037
>gb|BC058968.1| Mus musculus methionine-tRNA synthetase, mRNA (cDNA clone IMAGE:6816085), partial cds Length = 3113 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 854 ctcatcaccagtgccctcccctatgtcaacaatgtcccccaccttggaaacatcattggc 913 Query: 140 tgcgtgctcagtgc 153 || ||||||||||| Sbjct: 914 tgtgtgctcagtgc 927 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 atctgtgacaagtaccatgttatccatg 302 ||||||||||||||||||| ||||||| Sbjct: 1049 atctgtgacaagtaccatgccatccatg 1076
>gb|BC052042.1| Mus musculus methionine-tRNA synthetase, mRNA (cDNA clone IMAGE:5687158), partial cds Length = 3043 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 ||||||||||| || || ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 814 ctcatcaccagtgccctcccctatgtcaacaatgtcccccaccttggaaacatcattggc 873 Query: 140 tgcgtgctcagtgc 153 || ||||||||||| Sbjct: 874 tgtgtgctcagtgc 887 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 atctgtgacaagtaccatgttatccatg 302 ||||||||||||||||||| ||||||| Sbjct: 1009 atctgtgacaagtaccatgccatccatg 1036
>ref|XM_853945.1| PREDICTED: Canis familiaris similar to methionine-tRNA synthetase, transcript variant 5 (LOC474414), mRNA Length = 2741 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 |||||||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| || Sbjct: 816 ctcatcactagcgccctgccttatgtcaacaatgtcccccaccttggaaatatcattggt 875 Query: 140 tgcgtgctcagtgc 153 |||||||||||||| Sbjct: 876 tgcgtgctcagtgc 889 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 270 aggagatctgtgacaagtaccatgttatccatg 302 |||||||||||||||||||||||| ||||||| Sbjct: 1006 aggagatctgtgacaagtaccatgccatccatg 1038
>ref|XM_844439.1| PREDICTED: Canis familiaris similar to methionine-tRNA synthetase, transcript variant 3 (LOC474414), mRNA Length = 2735 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 |||||||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| || Sbjct: 816 ctcatcactagcgccctgccttatgtcaacaatgtcccccaccttggaaatatcattggt 875 Query: 140 tgcgtgctcagtgc 153 |||||||||||||| Sbjct: 876 tgcgtgctcagtgc 889 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 270 aggagatctgtgacaagtaccatgttatccatg 302 |||||||||||||||||||||||| ||||||| Sbjct: 1006 aggagatctgtgacaagtaccatgccatccatg 1038
>ref|XM_853869.1| PREDICTED: Canis familiaris similar to methionine-tRNA synthetase, transcript variant 4 (LOC474414), mRNA Length = 1965 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 |||||||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| || Sbjct: 816 ctcatcactagcgccctgccttatgtcaacaatgtcccccaccttggaaatatcattggt 875 Query: 140 tgcgtgctcagtgc 153 |||||||||||||| Sbjct: 876 tgcgtgctcagtgc 889 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 270 aggagatctgtgacaagtaccatgttatccatg 302 |||||||||||||||||||||||| ||||||| Sbjct: 1006 aggagatctgtgacaagtaccatgccatccatg 1038
>ref|XM_531646.2| PREDICTED: Canis familiaris similar to methionine-tRNA synthetase, transcript variant 1 (LOC474414), mRNA Length = 2784 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatcatcgga 139 |||||||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| || Sbjct: 816 ctcatcactagcgccctgccttatgtcaacaatgtcccccaccttggaaatatcattggt 875 Query: 140 tgcgtgctcagtgc 153 |||||||||||||| Sbjct: 876 tgcgtgctcagtgc 889 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 270 aggagatctgtgacaagtaccatgttatccatg 302 |||||||||||||||||||||||| ||||||| Sbjct: 1006 aggagatctgtgacaagtaccatgccatccatg 1038
>ref|XM_368198.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01046.4) partial mRNA Length = 2103 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 74 aacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaacatc 133 ||||| ||| ||||||| || || || |||||||||||||||||||| || || |||||| Sbjct: 46 aacatcctcgtcaccagtgccctcccttacgtcaacaacgtcccgcatctaggcaacatc 105 Query: 134 atcgg 138 ||||| Sbjct: 106 atcgg 110 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 215 gacgagtacgggacggccaccgagaccaaggccttggaggag 256 ||||||||||| || ||||||||||| |||||| |||||||| Sbjct: 187 gacgagtacggtaccgccaccgagacaaaggccctggaggag 228
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 236 gagaccaaggccttggaggagaagtgctcgcccaaggagatctgtgacaagta 288 |||||||| || ||||||||||| ||| | |||||||| |||||||||||||| Sbjct: 89993 gagaccaaagctttggaggagaattgcacccccaaggaaatctgtgacaagta 89941 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 332 tttgacaagtttgggcggacatctgctcctgaacagacagaagtctgccaggcaattttt 391 ||||||||||||||||| || || |||| |||||||| || || ||||| |||||||| Sbjct: 89629 tttgacaagtttgggcgaacttcaactccagaacagactgaggtgtgccaagcaattttc 89570 Query: 392 cataaattgatggaaaacaaatggctcacagagaataccatgcagcag 439 | || ||| ||| ||||| ||||| ||||||| |||||||||||| Sbjct: 89569 aacaagttgtgggacaacaagtggctttcagagaacaccatgcagcag 89522 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 72 gaaacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaaca 131 |||| ||||| |||||||| || |||| |||||||||||||| || || || || |||| Sbjct: 90492 gaaatatactaatcaccagtgctttgccttacgtcaacaacgttcctcatctcggaaaca 90433 Query: 132 tcatcggatg 141 |||||||||| Sbjct: 90432 tcatcggatg 90423
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 236 gagaccaaggccttggaggagaagtgctcgcccaaggagatctgtgacaagta 288 |||||||| || ||||||||||| ||| | |||||||| |||||||||||||| Sbjct: 68901 gagaccaaagctttggaggagaattgcacccccaaggaaatctgtgacaagta 68849 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 332 tttgacaagtttgggcggacatctgctcctgaacagacagaagtctgccaggcaattttt 391 ||||||||||||||||| || || |||| |||||||| || || ||||| |||||||| Sbjct: 68537 tttgacaagtttgggcgaacttcaactccagaacagactgaggtgtgccaagcaattttc 68478 Query: 392 cataaattgatggaaaacaaatggctcacagagaataccatgcagcag 439 | || ||| ||| ||||| ||||| ||||||| |||||||||||| Sbjct: 68477 aacaagttgtgggacaacaagtggctttcagagaacaccatgcagcag 68430 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 72 gaaacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaaca 131 |||| ||||| |||||||| || |||| |||||||||||||| || || || || |||| Sbjct: 69400 gaaatatactaatcaccagtgctttgccttacgtcaacaacgttcctcatctcggaaaca 69341 Query: 132 tcatcggatg 141 |||||||||| Sbjct: 69340 tcatcggatg 69331
>gb|AY119445.1| Drosophila melanogaster AT05114 full insert cDNA Length = 3483 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 tgcggcacggacgagtacgggacggccaccgagaccaaggc 246 ||||||||||| |||||||| ||||||||||||| |||||| Sbjct: 1093 tgcggcacggatgagtacggtacggccaccgagaacaaggc 1133
>ref|NM_137538.1| Drosophila melanogaster CG15100-RA (CG15100), mRNA Length = 3483 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 tgcggcacggacgagtacgggacggccaccgagaccaaggc 246 ||||||||||| |||||||| ||||||||||||| |||||| Sbjct: 1084 tgcggcacggatgagtacggtacggccaccgagaacaaggc 1124
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 206 tgcggcacggacgagtacgggacggccaccgagaccaaggc 246 ||||||||||| |||||||| ||||||||||||| |||||| Sbjct: 79137 tgcggcacggatgagtacggtacggccaccgagaacaaggc 79097
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 206 tgcggcacggacgagtacgggacggccaccgagaccaaggc 246 ||||||||||| |||||||| ||||||||||||| |||||| Sbjct: 220101 tgcggcacggatgagtacggtacggccaccgagaacaaggc 220061
>gb|AC004298.1|AC004298 Drosophila melanogaster DNA sequence (P1 DS02599 (D184)), complete sequence Length = 81522 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 tgcggcacggacgagtacgggacggccaccgagaccaaggc 246 ||||||||||| |||||||| ||||||||||||| |||||| Sbjct: 49383 tgcggcacggatgagtacggtacggccaccgagaacaaggc 49423
>ref|XM_424183.1| PREDICTED: Gallus gallus similar to ADP-ribosylarginine hydrolase (ADP-ribose-L-arginine cleaving enzyme) (LOC426545), partial mRNA Length = 1923 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 206 tgcggcacggacgagtacgggacggccaccgagaccaaggccttggaggag 256 |||||||| ||||||||||| || |||||||||||||| || |||||||| Sbjct: 586 tgcggcaccgacgagtacggcacagccaccgagaccaaagcagtggaggag 536
>ref|XM_506024.1| Yarrowia lipolytica CLIB122, YALI0F29843g predicted mRNA Length = 2253 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 218 gagtacgggacggccaccgagaccaaggccttggaggagaag 259 |||||||| || |||||||||||||||||| |||| |||||| Sbjct: 727 gagtacggaactgccaccgagaccaaggccctggaagagaag 768 Score = 44.1 bits (22), Expect = 0.42 Identities = 58/70 (82%) Strand = Plus / Plus Query: 71 cgaaacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaac 130 |||||||| ||||||||| || ||||||||||||||||| || || || || || ||| Sbjct: 580 cgaaacatcctcatcacctctgctctgccctacgtcaacaatgtgccccatcttggtaac 639 Query: 131 atcatcggat 140 || ||||||| Sbjct: 640 attatcggat 649
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 218 gagtacgggacggccaccgagaccaaggccttggaggagaag 259 |||||||| || |||||||||||||||||| |||| |||||| Sbjct: 3735388 gagtacggaactgccaccgagaccaaggccctggaagagaag 3735347 Score = 44.1 bits (22), Expect = 0.42 Identities = 58/70 (82%) Strand = Plus / Minus Query: 71 cgaaacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaac 130 |||||||| ||||||||| || ||||||||||||||||| || || || || || ||| Sbjct: 3735535 cgaaacatcctcatcacctctgctctgccctacgtcaacaatgtgccccatcttggtaac 3735476 Query: 131 atcatcggat 140 || ||||||| Sbjct: 3735475 attatcggat 3735466
>gb|BT013704.1| Lycopersicon esculentum clone 132546F, mRNA sequence Length = 2678 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Plus Query: 72 gaaacatactcatcaccagcgcgctgccctacgtcaacaacgtcccgcacctggggaaca 131 ||||||| |||||||| ||||| |||| || ||||||||||| || || || || |||| Sbjct: 147 gaaacatcctcatcacaagcgctttgccgtatgtcaacaacgttcctcatctcggaaaca 206 Query: 132 tcatcgga 139 |||||||| Sbjct: 207 tcatcgga 214
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 200 tacatatgcggcacggacgagtacgggacggccaccgaga 239 ||||| ||||| ||||||||||| |||||||||| ||||| Sbjct: 117445 tacatctgcggaacggacgagtatgggacggccatcgaga 117484
>ref|XM_317601.2| Anopheles gambiae str. PEST ENSANGP00000010004 (ENSANGG00000007515), partial mRNA Length = 3033 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 185 gggtacaacgctatctacatatgcggcacggacgagtacgggacggc 231 ||||||||| | ||||||| ||||||||||||||||||| ||||| Sbjct: 1027 gggtacaacacgctctacatcggcggcacggacgagtacggcacggc 1073
>ref|XM_747175.1| Aspergillus fumigatus Af293 methionyl-tRNA synthetase (Afu1g09010) partial mRNA Length = 1956 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 218 gagtacgggacggccaccgagaccaaggccttggaggagaag 259 |||||||| || || || ||||| |||||||||||||||||| Sbjct: 187 gagtacggcactgcaacggagacgaaggccttggaggagaag 228
>ref|XM_216910.3| PREDICTED: Rattus norvegicus methionine-tRNA synthetase (predicted) (Mars_predicted), mRNA Length = 2824 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 104 gtcaacaacgtcccgcacctggggaacatcatcggatgcgtgctcagtgc 153 |||||||| ||||| ||||| || |||||||| || || ||||||||||| Sbjct: 886 gtcaacaatgtcccccaccttggaaacatcattggctgtgtgctcagtgc 935
>ref|XM_653892.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1380.2), mRNA Length = 1977 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 206 tgcggcacggacgagtacgggacggccaccgagaccaaggccttggaggagaa 258 ||||| || |||||||| || || ||||| ||||| ||||| ||||||||||| Sbjct: 175 tgcggaaccgacgagtatggcaccgccacggagacgaaggctttggaggagaa 227
>ref|XM_964108.1| PREDICTED: Tribolium castaneum similar to CG15100-PA (LOC657661), mRNA Length = 2870 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 215 gacgagtacgggacggccaccgagaccaaggccttggagga 255 ||||||||||| || |||||||| |||||||| || ||||| Sbjct: 910 gacgagtacggtactgccaccgaaaccaaggctttagagga 950
>emb|BX890595.10| Zebrafish DNA sequence from clone DKEY-104K17 in linkage group 5, complete sequence Length = 99914 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 attgatggaaaacaaatggct 417 ||||||||||||||||||||| Sbjct: 94205 attgatggaaaacaaatggct 94225
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 tttcataaattgatggaaaacaaat 413 ||||||||||||||||| ||||||| Sbjct: 10098344 tttcataaattgatggacaacaaat 10098320
>gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complete sequence Length = 83996 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 tctgctcctgaacagacagaa 373 ||||||||||||||||||||| Sbjct: 34090 tctgctcctgaacagacagaa 34070
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 tttcataaattgatggaaaacaaat 413 ||||||||||||||||| ||||||| Sbjct: 71020 tttcataaattgatggacaacaaat 70996
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 206 tgcggcacggacgagtacgggacggccaccgagaccaaggc 246 |||||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 1090782 tgcggcaccgacgaatacggaaccgccaccgagacaaaggc 1090822
>gb|BC083360.1| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone IMAGE:5716562), partial cds Length = 2071 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 963 caccagcgcgctgccctacg 982
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 catcggatgcgtgctcagtgccga 156 ||||||||||||||||| |||||| Sbjct: 678444 catcggatgcgtgctcactgccga 678421
>gb|AC142406.2| Mus musculus BAC clone RP24-531P16 from chromosome 9, complete sequence Length = 169938 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 28809 caccagcgcgctgccctacg 28790
>gb|BC069948.1| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone IMAGE:6515341), partial cds Length = 1968 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 856 caccagcgcgctgccctacg 875
>gb|DQ120126.1| Raspberry bushy dwarf virus segment RNA-2, complete sequence Length = 2164 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 caatttttcataaattgatg 403 |||||||||||||||||||| Sbjct: 556 caatttttcataaattgatg 537
>ref|XM_992815.1| PREDICTED: Mus musculus SRY-box containing gene 14 (Sox14), mRNA Length = 2131 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 1032 caccagcgcgctgccctacg 1051
>ref|XM_907434.2| PREDICTED: Mus musculus SRY-box containing gene 14 (Sox14), mRNA Length = 2140 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 1032 caccagcgcgctgccctacg 1051
>ref|XM_284529.6| PREDICTED: Mus musculus SRY-box containing gene 14 (Sox14), mRNA Length = 2131 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 1032 caccagcgcgctgccctacg 1051
>gb|BC057757.1| Xenopus laevis hypothetical protein MGC69150, mRNA (cDNA clone MGC:69150 IMAGE:5048691), complete cds Length = 3010 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 agatctgtgacaagtaccatgttatcca 300 ||||||||||||||||| ||| |||||| Sbjct: 1119 agatctgtgacaagtacaatgctatcca 1146 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 80 ctcatcaccagcgcgctgccctacgtcaacaacgtcccgcacct 123 ||||||||||| || ||||||| ||||| ||||| |||||||| Sbjct: 926 ctcatcaccagtgctttgccctatgtcaataacgttccgcacct 969
>gb|BC044735.2| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone IMAGE:5116317), partial cds Length = 1323 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 324 caccagcgcgctgccctacg 343
>gb|BC055767.1| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone IMAGE:6412399), partial cds Length = 2096 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 956 caccagcgcgctgccctacg 975
>gb|BC100555.1| Mus musculus SRY-box containing gene 14, mRNA (cDNA clone IMAGE:6829122), partial cds Length = 2080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 966 caccagcgcgctgccctacg 985
>gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome 9, complete sequence Length = 221791 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 217282 caccagcgcgctgccctacg 217301
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catcaccagcgcgctgccct 101 |||||||||||||||||||| Sbjct: 4255114 catcaccagcgcgctgccct 4255095 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catcaccagcgcgctgccct 101 |||||||||||||||||||| Sbjct: 4243548 catcaccagcgcgctgccct 4243567
>dbj|AK138208.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230034A04 product:SRY-box containing gene 14, full insert sequence Length = 1955 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 858 caccagcgcgctgccctacg 877
>ref|XM_684148.1| PREDICTED: Danio rerio similar to 35 kDa serum lectin (LOC560744), mRNA Length = 978 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gagatctgtgacaagtaccatgtt 295 |||||| ||||||||||||||||| Sbjct: 163 gagatccgtgacaagtaccatgtt 186
>ref|XM_688559.1| PREDICTED: Danio rerio similar to 35 kDa serum lectin (LOC565279), mRNA Length = 978 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gagatctgtgacaagtaccatgtt 295 |||||| ||||||||||||||||| Sbjct: 163 gagatccgtgacaagtaccatgtt 186
>gb|AF182357.1|AF182357 Mus musculus SOX14 protein (Sox14) gene, partial cds Length = 646 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 439 caccagcgcgctgccctacg 458
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete sequence Length = 211817 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 tttgacataaagtttgacaa 339 |||||||||||||||||||| Sbjct: 195754 tttgacataaagtttgacaa 195735
>gb|AC090522.1|AC090522 Caenorhabditis briggsae cosmid CB015K23, complete sequence Length = 46455 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tttcataaattgatggaaaa 408 |||||||||||||||||||| Sbjct: 41286 tttcataaattgatggaaaa 41267
>ref|XM_236605.2| PREDICTED: Rattus norvegicus SRY-box containing gene 14 (predicted) (Sox14_predicted), mRNA Length = 2121 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 1032 caccagcgcgctgccctacg 1051
>emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, complete sequence Length = 219044 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gagatctgtgacaagtaccatgtt 295 |||||| ||||||||||||||||| Sbjct: 123652 gagatccgtgacaagtaccatgtt 123629
>gb|AF193437.1|AF193437 Mus musculus HMG box transcription factor (Sox14) gene, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 862 caccagcgcgctgccctacg 881
>gb|AF193435.1|AF193435 Mus musculus HMG box transcription factor (Sox14) mRNA, partial cds Length = 989 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 465 caccagcgcgctgccctacg 484
>emb|BX649532.7| Zebrafish DNA sequence from clone CH211-260H3 in linkage group 20, complete sequence Length = 159939 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gagatctgtgacaagtaccatgtt 295 |||||| ||||||||||||||||| Sbjct: 126343 gagatccgtgacaagtaccatgtt 126366
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4, complete sequence Length = 228177 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 tttgacataaagtttgacaa 339 |||||||||||||||||||| Sbjct: 16052 tttgacataaagtttgacaa 16071
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 catcaccagcgcgctgccct 101 |||||||||||||||||||| Sbjct: 4261901 catcaccagcgcgctgccct 4261882 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 catcaccagcgcgctgccct 101 |||||||||||||||||||| Sbjct: 4250317 catcaccagcgcgctgccct 4250336
>dbj|AK116839.1| Ciona intestinalis cDNA, clone:cilv008l08, full insert sequence Length = 2886 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 200 tacatatgcggcacggacgagtacgggacggccaccgagaccaa 243 ||||| |||||||| || || ||||||||||| || |||||||| Sbjct: 912 tacatctgcggcaccgatgaatacgggacggctactgagaccaa 955
>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence Length = 171495 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caccagcgcgctgccctacg 104 |||||||||||||||||||| Sbjct: 16971 caccagcgcgctgccctacg 16990 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,389,777 Number of Sequences: 3902068 Number of extensions: 3389777 Number of successful extensions: 58991 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58614 Number of HSP's gapped (non-prelim): 366 length of query: 488 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 466 effective length of database: 17,147,199,772 effective search space: 7990595093752 effective search space used: 7990595093752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
