>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2319

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
 Frame = +1

Query: 40   GGDVPGGAYIATGLLSAIAV-----HLTNPSPPAPA--LPTRTHSKVPNRAS 174
            G   PGG  ++ GLL+ +AV      L  P+PP P+  LP    S++ N A+
Sbjct: 2150 GRQPPGGCVLSLGLLNPVAVPLDWARLPPPAPPGPSFLLPLAPGSQLLNPAT 2201

>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = +1

Query: 40   GGDVPGGAYIATGLLSAIAV-----HLTNPSPPAPA 132
            G   PGG  ++ GLL+ +AV      L  P+PP P+
Sbjct: 2149 GRQPPGGCVLSLGLLNPVAVPLDWARLPPPAPPGPS 2184

>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2318

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = +1

Query: 40   GGDVPGGAYIATGLLSAIAV-----HLTNPSPPAPA 132
            G   PGG  ++ GLL+ +AV      L  P+PP P+
Sbjct: 2149 GRQPPGGCVLSFGLLNPVAVPLDWARLPPPAPPGPS 2184

>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 574

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 22  VPLVVHGGDVPGGAYIATGLLSAIAVHLTNPSPPAPALPTR 144
           +P+ + GGDV G A   TG   A  V + N     PAL  R
Sbjct: 40  LPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADR 80

>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 189 MAAAAGDVEAFLA 227
           MAAAAGDVEAFLA
Sbjct: 1   MAAAAGDVEAFLA 13

>SYFB_CLOAB (Q97GL0) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 792

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 10  ELTVVPLVVHGGDVPGGAYIATGLLSAI 93
           E  +VP+ +HG  +PGG  I  G L  +
Sbjct: 86  ENDIVPVALHGSTLPGGVKIKKGKLRGV 113


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,704,480
Number of Sequences: 219361
Number of extensions: 419025
Number of successful extensions: 2322
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2317
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)