ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-me... 244 1e-61
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.003
3dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.003
4dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.003
5gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome... 42 0.74
6gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.74
7gb|AC104148.5| Drosophila melanogaster X BAC RP98-34O3 (Roswell ... 42 0.74
8ref|NM_166957.1| Drosophila melanogaster CG32793-RA (CG32793), mRNA 42 0.74
9gb|AC098575.6| Drosophila melanogaster X BAC RP98-3D13 (Roswell ... 42 0.74
10emb|CR407046.1| Gallus gallus finished cDNA, clone ChEST1004o7 42 0.74
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.74
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.74
13dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.74
14emb|AL512548.1|B0311F12 Oryza sativa genomic DNA, chromosome 4, ... 42 0.74
15gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 o... 42 0.74
16gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome 42 0.74
17gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.74
18gb|U22295.1|DMU22295 Drosophila melanogaster unknown protein mRN... 42 0.74
19gb|U22182.1|DMU22182 Drosophila melanogaster ORF1 and ORF2 genes... 42 0.74
20emb|AL031366.1|DMC100G7 Drosophila melanogaster cosmid clone 100G7 42 0.74
21ref|NM_187935.1| Oryza sativa (japonica cultivar-group), predic... 40 2.9
22gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 2.9
23ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative... 40 2.9
24gb|BC040370.1| Mus musculus SEC24 related gene family, member C ... 40 2.9
25gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 2.9
26ref|NM_010928.1| Mus musculus Notch gene homolog 2 (Drosophila) ... 40 2.9
27ref|NM_172596.1| Mus musculus SEC24 related gene family, member ... 40 2.9
28gb|AC127417.3| Mus musculus BAC clone RP23-459M2 from chromosome... 40 2.9
29ref|NM_001040284.1| Homo sapiens PAP associated domain containin... 40 2.9
30ref|NM_001040285.1| Homo sapiens PAP associated domain containin... 40 2.9
31gb|AC158547.7| Mus musculus chromosome 3, clone RP23-477L20, com... 40 2.9
32gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, comple... 40 2.9
33gb|AC129773.4| Mus musculus BAC clone RP24-73D4 from chromosome ... 40 2.9
34gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosom... 40 2.9
35gb|AC098712.3| Mus musculus BAC clone RP23-2A21 from 10, complet... 40 2.9
36gb|AC124194.3| Mus musculus BAC clone RP23-277L21 from 2, comple... 40 2.9
37gb|AC121599.3| Mus musculus BAC clone RP23-300H21 from 14, compl... 40 2.9
38gb|AC164702.2| Mus musculus BAC clone RP23-402H19 from chromosom... 40 2.9
39gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, co... 40 2.9
40ref|XM_501233.1| Yarrowia lipolytica CLIB122, YALI0B22704g predi... 40 2.9
41gb|BC035270.1| Homo sapiens cDNA clone IMAGE:4827546 40 2.9
42gb|AC098801.2| Drosophila melanogaster 3L BAC RP98-12G7 (Roswell... 40 2.9
43gb|AC091207.3| Drosophila melanogaster 3L BAC RP98-12P14 (Roswel... 40 2.9
44gb|AC090495.5| Genomic sequence for Mus musculus, clone RP23-60B... 40 2.9
45gb|AY118564.1| Drosophila melanogaster LD40028 full insert cDNA 40 2.9
46ref|NM_168111.3| Drosophila melanogaster CG32423-RA, transcript ... 40 2.9
47gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 40 2.9
48dbj|AK155666.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 2.9
49dbj|AK155137.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 2.9
50gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 gen... 40 2.9
51gb|AC107828.16| Mus musculus chromosome 18, clone RP23-213N4, co... 40 2.9
52dbj|AK036519.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 2.9
53gb|AC153658.4| Mus musculus BAC clone RP23-272J19 from chromosom... 40 2.9
54gb|AC068305.30|AC068305 Homo sapiens 12 BAC RP11-557F20 (Roswell... 40 2.9
55dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
56dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
57dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
58dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
59gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137... 40 2.9
60dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
61dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
62dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
63dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
64emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chro... 40 2.9
65gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete ... 40 2.9
66gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 2.9
67gb|AE003567.4| Drosophila melanogaster chromosome 3L, section 18... 40 2.9
68dbj|AK122199.1| Mus musculus mRNA for mKIAA0079 protein 40 2.9
69gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9
70gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9
71emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057... 40 2.9
72gb|AC125341.4| Mus musculus BAC clone RP24-459O3 from 6, complet... 40 2.9
73gb|AC122293.3| Mus musculus BAC clone RP23-257O9 from 10, comple... 40 2.9
74gb|AC124587.5| Mus musculus BAC clone RP23-132G24 from 1, comple... 40 2.9
75emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 2.9
76emb|AL928735.9| Mouse DNA sequence from clone RP23-413M3 on chro... 40 2.9
77gb|AC121505.14| Mus musculus chromosome 8, clone RP24-144M14, co... 40 2.9
78dbj|D32210.1| Mus musculus (Notch2) mRNA, complete cds 40 2.9 
>dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-methionine:
           L-methionine S-methyltransferase, complete cds
          Length = 3543

 Score =  244 bits (123), Expect = 1e-61
 Identities = 123/123 (100%)
 Strand = Plus / Plus

                                                                       
Query: 107 ccaacccatcacctcctgctcctgctcttcccactcgaacccactcgaaggtaccgaacc 166
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccaacccatcacctcctgctcctgctcttcccactcgaacccactcgaaggtaccgaacc 60

                                                                       
Query: 167 gagcgtccagagccgtccgggaatggctgcggcggcgggggacgtggaggcgttcctggc 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gagcgtccagagccgtccgggaatggctgcggcggcgggggacgtggaggcgttcctggc 120

              
Query: 227 ggc 229
           |||
Sbjct: 121 ggc 123
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 191      ggctgcggcggcgggggacgtggag 215
                |||||||||||||||||||||||||
Sbjct: 27634434 ggctgcggcggcgggggacgtggag 27634458



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     ggctgcggcggcgggggacg 210
               ||||||||||||||||||||
Sbjct: 9470423 ggctgcggcggcgggggacg 9470442
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>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0135D07
          Length = 170587

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 191    ggctgcggcggcgggggacgtggag 215
              |||||||||||||||||||||||||
Sbjct: 114103 ggctgcggcggcgggggacgtggag 114127
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>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0005A04
          Length = 140723

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 191   ggctgcggcggcgggggacgtggag 215
             |||||||||||||||||||||||||
Sbjct: 20300 ggctgcggcggcgggggacgtggag 20324
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>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0072N24 map C61883S, complete sequence
          Length = 163337

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 194   tgcggcggcgggggacgtggaggcg 218
             |||||||||| ||||||||||||||
Sbjct: 53987 tgcggcggcgcgggacgtggaggcg 53963
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>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0480H08, complete sequence
          Length = 156301

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   gcggcggcgggggacgtggag 215
             |||||||||||||||||||||
Sbjct: 82044 gcggcggcgggggacgtggag 82024
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>gb|AC104148.5| Drosophila melanogaster X BAC RP98-34O3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181395

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 112    ccatcacctcctgctcctgct 132
              |||||||||||||||||||||
Sbjct: 145470 ccatcacctcctgctcctgct 145450
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>ref|NM_166957.1| Drosophila melanogaster CG32793-RA (CG32793), mRNA
          Length = 2603

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 112  ccatcacctcctgctcctgct 132
            |||||||||||||||||||||
Sbjct: 2073 ccatcacctcctgctcctgct 2053
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>gb|AC098575.6| Drosophila melanogaster X BAC RP98-3D13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 155685

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    ccatcacctcctgctcctgct 132
              |||||||||||||||||||||
Sbjct: 132090 ccatcacctcctgctcctgct 132110
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>emb|CR407046.1| Gallus gallus finished cDNA, clone ChEST1004o7
          Length = 1160

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 111 cccatcacctcctgctcctgc 131
           |||||||||||||||||||||
Sbjct: 113 cccatcacctcctgctcctgc 133
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 195      gcggcggcgggggacgtggag 215
                |||||||||||||||||||||
Sbjct: 21324572 gcggcggcgggggacgtggag 21324552



 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 194     tgcggcggcgggggacgtggaggcg 218
               |||||||||| ||||||||||||||
Sbjct: 9960206 tgcggcggcgcgggacgtggaggcg 9960182



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 196     cggcggcgggggacgtggaggcgt 219
               |||||||||||| |||||||||||
Sbjct: 6518499 cggcggcgggggccgtggaggcgt 6518522
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 70      gccaccggcctcctctccgcc 90
               |||||||||||||||||||||
Sbjct: 9839755 gccaccggcctcctctccgcc 9839775
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>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1063H10
          Length = 170453

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 70     gccaccggcctcctctccgcc 90
              |||||||||||||||||||||
Sbjct: 103687 gccaccggcctcctctccgcc 103707
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>emb|AL512548.1|B0311F12 Oryza sativa genomic DNA, chromosome 4, BAC clone: B0311F12, complete
            sequence
          Length = 55361

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   gccaccggcctcctctccgcc 90
            |||||||||||||||||||||
Sbjct: 5440 gccaccggcctcctctccgcc 5460
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>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete
              sequence
          Length = 309053

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 112    ccatcacctcctgctcctgct 132
              |||||||||||||||||||||
Sbjct: 298163 ccatcacctcctgctcctgct 298143
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>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 113     catcacctcctgctcctgctc 133
               |||||||||||||||||||||
Sbjct: 1676643 catcacctcctgctcctgctc 1676623
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 195      gcggcggcgggggacgtggag 215
                |||||||||||||||||||||
Sbjct: 21634771 gcggcggcgggggacgtggag 21634751



 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 194      tgcggcggcgggggacgtggaggcg 218
                |||||||||| ||||||||||||||
Sbjct: 10031903 tgcggcggcgcgggacgtggaggcg 10031879



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 196     cggcggcgggggacgtggaggcgt 219
               |||||||||||| |||||||||||
Sbjct: 6584966 cggcggcgggggccgtggaggcgt 6584989
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>gb|U22295.1|DMU22295 Drosophila melanogaster unknown protein mRNA, partial cds
          Length = 2006

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 112  ccatcacctcctgctcctgct 132
            |||||||||||||||||||||
Sbjct: 1326 ccatcacctcctgctcctgct 1306
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>gb|U22182.1|DMU22182 Drosophila melanogaster ORF1 and ORF2 genes, complete cds
          Length = 4358

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 112  ccatcacctcctgctcctgct 132
            |||||||||||||||||||||
Sbjct: 3834 ccatcacctcctgctcctgct 3814
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>emb|AL031366.1|DMC100G7 Drosophila melanogaster cosmid clone 100G7
          Length = 40752

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   ccatcacctcctgctcctgct 132
             |||||||||||||||||||||
Sbjct: 34499 ccatcacctcctgctcctgct 34479
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>ref|NM_187935.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 315

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 195 gcggcggcgggggacgtggaggcg 218
           |||||||||||||||| |||||||
Sbjct: 56  gcggcggcgggggacgaggaggcg 79
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     cctcctgctcctgctcttcc 137
               ||||||||||||||||||||
Sbjct: 3834811 cctcctgctcctgctcttcc 3834792
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>ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative alcohol oxidase
            (OSJNBa0001K12.13), mRNA
          Length = 2271

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  ggacgtggaggcgttcctgg 225
            ||||||||||||||||||||
Sbjct: 1920 ggacgtggaggcgttcctgg 1939
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>gb|BC040370.1| Mus musculus SEC24 related gene family, member C (S. cerevisiae),
           mRNA (cDNA clone MGC:25454 IMAGE:4239204), complete cds
          Length = 4439

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 tcacctcctgctcctgctct 134
           ||||||||||||||||||||
Sbjct: 819 tcacctcctgctcctgctct 838
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 27      cctcgtcgtccacggcggcgacgt 50
               |||||||| |||||||||||||||
Sbjct: 2283037 cctcgtcgcccacggcggcgacgt 2283060
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>ref|NM_010928.1| Mus musculus Notch gene homolog 2 (Drosophila) (Notch2), mRNA
          Length = 7579

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  atcacctcctgctcctgctc 133
            ||||||||||||||||||||
Sbjct: 5017 atcacctcctgctcctgctc 4998
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>ref|NM_172596.1| Mus musculus SEC24 related gene family, member C (S. cerevisiae)
           (Sec24c), mRNA
          Length = 4439

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 tcacctcctgctcctgctct 134
           ||||||||||||||||||||
Sbjct: 819 tcacctcctgctcctgctct 838
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>gb|AC127417.3| Mus musculus BAC clone RP23-459M2 from chromosome 10, complete
            sequence
          Length = 192814

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  cctcctgctcctgctcttcc 137
            ||||||||||||||||||||
Sbjct: 8106 cctcctgctcctgctcttcc 8087
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>ref|NM_001040284.1| Homo sapiens PAP associated domain containing 5 (PAPD5), transcript
            variant 1, mRNA
          Length = 7589

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 100  cacctcaccaacccatcacctcct 123
            |||||||||||||||||| |||||
Sbjct: 4407 cacctcaccaacccatcagctcct 4384
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>ref|NM_001040285.1| Homo sapiens PAP associated domain containing 5 (PAPD5), transcript
            variant 2, mRNA
          Length = 7448

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 100  cacctcaccaacccatcacctcct 123
            |||||||||||||||||| |||||
Sbjct: 4266 cacctcaccaacccatcagctcct 4243
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>gb|AC158547.7| Mus musculus chromosome 3, clone RP23-477L20, complete sequence
          Length = 182793

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 54361 cctcctgctcctgctcttcc 54342
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>gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, complete sequence
          Length = 196803

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 65997 cctcctgctcctgctcttcc 65978
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>gb|AC129773.4| Mus musculus BAC clone RP24-73D4 from chromosome 19, complete sequence
          Length = 218771

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 103    ctcaccaacccatcacctcctgct 126
              ||||||||||||||| ||||||||
Sbjct: 111524 ctcaccaacccatcaactcctgct 111547
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>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence
          Length = 190309

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   atcacctcctgctcctgctc 133
             ||||||||||||||||||||
Sbjct: 37878 atcacctcctgctcctgctc 37859
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>gb|AC098712.3| Mus musculus BAC clone RP23-2A21 from 10, complete sequence
          Length = 205054

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    cctcctgctcctgctcttcc 137
              ||||||||||||||||||||
Sbjct: 171856 cctcctgctcctgctcttcc 171837
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>gb|AC124194.3| Mus musculus BAC clone RP23-277L21 from 2, complete sequence
          Length = 181676

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 44164 cctcctgctcctgctcttcc 44183



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 44032 cctcctgctcctgctcttcc 44051
to top
>gb|AC121599.3| Mus musculus BAC clone RP23-300H21 from 14, complete sequence
          Length = 218747

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   tcacctcctgctcctgctct 134
             ||||||||||||||||||||
Sbjct: 53936 tcacctcctgctcctgctct 53955
to top
>gb|AC164702.2| Mus musculus BAC clone RP23-402H19 from chromosome 10, complete sequence
          Length = 208221

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    cctcctgctcctgctcttcc 137
              ||||||||||||||||||||
Sbjct: 206894 cctcctgctcctgctcttcc 206875
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>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence
          Length = 178775

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 98787 cctcctgctcctgctcttcc 98806
to top
>ref|XM_501233.1| Yarrowia lipolytica CLIB122, YALI0B22704g predicted mRNA
          Length = 4824

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  cctcctgctcctgctcttcc 137
            ||||||||||||||||||||
Sbjct: 4561 cctcctgctcctgctcttcc 4542
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>gb|BC035270.1| Homo sapiens cDNA clone IMAGE:4827546
          Length = 3692

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 cacctcaccaacccatcacctcct 123
           |||||||||||||||||| |||||
Sbjct: 500 cacctcaccaacccatcagctcct 477
to top
>gb|AC098801.2| Drosophila melanogaster 3L BAC RP98-12G7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 178563

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    ggcggcgggggacgtggaggcgtt 220
              |||||||||||| |||||||||||
Sbjct: 151466 ggcggcgggggaggtggaggcgtt 151443
to top
>gb|AC091207.3| Drosophila melanogaster 3L BAC RP98-12P14 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 160504

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 197   ggcggcgggggacgtggaggcgtt 220
             |||||||||||| |||||||||||
Sbjct: 57568 ggcggcgggggaggtggaggcgtt 57545
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>gb|AC090495.5| Genomic sequence for Mus musculus, clone RP23-60B7, complete sequence
          Length = 82400

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 22853 cctcctgctcctgctcttcc 22872



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 22667 cctcctgctcctgctcttcc 22686



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 22649 cctcctgctcctgctcttcc 22668



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 22592 cctcctgctcctgctcttcc 22611
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>gb|AY118564.1| Drosophila melanogaster LD40028 full insert cDNA
          Length = 2522

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 197 ggcggcgggggacgtggaggcgtt 220
           |||||||||||| |||||||||||
Sbjct: 448 ggcggcgggggaggtggaggcgtt 471
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>ref|NM_168111.3| Drosophila melanogaster CG32423-RA, transcript variant A (CG32423),
           mRNA
          Length = 3047

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 197 ggcggcgggggacgtggaggcgtt 220
           |||||||||||| |||||||||||
Sbjct: 448 ggcggcgggggaggtggaggcgtt 471
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>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic
             sequence, complete sequence
          Length = 147289

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 196   cggcggcgggggacgtggaggcgt 219
             |||||||||||| |||||||||||
Sbjct: 25731 cggcggcgggggccgtggaggcgt 25708
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>dbj|AK155666.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730116C03
            product:Notch gene homolog 2 (Drosophila), full insert
            sequence
          Length = 3463

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  atcacctcctgctcctgctc 133
            ||||||||||||||||||||
Sbjct: 1825 atcacctcctgctcctgctc 1806
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>dbj|AK155137.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630203H03
            product:Notch gene homolog 2 (Drosophila), full insert
            sequence
          Length = 3463

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  atcacctcctgctcctgctc 133
            ||||||||||||||||||||
Sbjct: 1825 atcacctcctgctcctgctc 1806
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>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete
             sequence
          Length = 144724

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   ggacgtggaggcgttcctgg 225
             ||||||||||||||||||||
Sbjct: 87762 ggacgtggaggcgttcctgg 87781
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>gb|AC107828.16| Mus musculus chromosome 18, clone RP23-213N4, complete sequence
          Length = 212092

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    cctcctgctcctgctcttcc 137
              ||||||||||||||||||||
Sbjct: 105920 cctcctgctcctgctcttcc 105901
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>dbj|AK036519.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
           library, clone:9830126B01 product:PROTEIN TRANSPORT
           PROTEIN SEC24C (SEC24-RELATED PROTEIN C) homolog [Homo
           sapiens], full insert sequence
          Length = 3658

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 tcacctcctgctcctgctct 134
           ||||||||||||||||||||
Sbjct: 841 tcacctcctgctcctgctct 860
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>gb|AC153658.4| Mus musculus BAC clone RP23-272J19 from chromosome 12, complete sequence
          Length = 202978

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    cctcctgctcctgctcttcc 137
              ||||||||||||||||||||
Sbjct: 131216 cctcctgctcctgctcttcc 131197



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    cctcctgctcctgctcttcc 137
              ||||||||||||||||||||
Sbjct: 131162 cctcctgctcctgctcttcc 131143
to top
>gb|AC068305.30|AC068305 Homo sapiens 12 BAC RP11-557F20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 131811

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  ctcctgctcttcccactcga 144
            ||||||||||||||||||||
Sbjct: 5700 ctcctgctcttcccactcga 5719
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     gggaatggctgcggcggcgg 204
               ||||||||||||||||||||
Sbjct: 3242515 gggaatggctgcggcggcgg 3242496
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 206      ggacgtggaggcgttcctgg 225
                ||||||||||||||||||||
Sbjct: 17104574 ggacgtggaggcgttcctgg 17104555
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 181      gtccgggaatggctgcggcggcgg 204
                ||||||||||||| ||||||||||
Sbjct: 16593820 gtccgggaatggcggcggcggcgg 16593797
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 195     gcggcggcgggggacgtggaggcg 218
               |||||||||||||||| |||||||
Sbjct: 8668576 gcggcggcgggggacgaggaggcg 8668599
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>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence
          Length = 192814

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   cacctcaccaacccatcacctcct 123
             |||||||||||||||||| |||||
Sbjct: 93930 cacctcaccaacccatcagctcct 93953
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>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0462H08
          Length = 139152

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 195    gcggcggcgggggacgtggaggcg 218
              |||||||||||||||| |||||||
Sbjct: 100771 gcggcggcgggggacgaggaggcg 100794
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>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0006C08
          Length = 151987

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ggctgcggcggcgggggacg 210
             ||||||||||||||||||||
Sbjct: 83984 ggctgcggcggcgggggacg 84003
to top
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1123_B08
          Length = 134028

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 181    gtccgggaatggctgcggcggcgg 204
              ||||||||||||| ||||||||||
Sbjct: 126045 gtccgggaatggcggcggcggcgg 126022
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>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1596_C06
          Length = 124721

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 181  gtccgggaatggctgcggcggcgg 204
            ||||||||||||| ||||||||||
Sbjct: 1959 gtccgggaatggcggcggcggcgg 1936
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>emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chromosome 2, complete
             sequence
          Length = 116887

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 19821 cctcctgctcctgctcttcc 19802



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 19689 cctcctgctcctgctcttcc 19670
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>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence
          Length = 214016

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   atcacctcctgctcctgctc 133
             ||||||||||||||||||||
Sbjct: 60704 atcacctcctgctcctgctc 60723
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 29      tcgtcgtccacggcggcgac 48
               ||||||||||||||||||||
Sbjct: 1052552 tcgtcgtccacggcggcgac 1052533
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>gb|AE003567.4| Drosophila melanogaster chromosome 3L, section 18 of 83 of the complete
              sequence
          Length = 166593

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    ggcggcgggggacgtggaggcgtt 220
              |||||||||||| |||||||||||
Sbjct: 164796 ggcggcgggggaggtggaggcgtt 164773
to top
>dbj|AK122199.1| Mus musculus mRNA for mKIAA0079 protein
          Length = 4196

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 tcacctcctgctcctgctct 134
           ||||||||||||||||||||
Sbjct: 522 tcacctcctgctcctgctct 541
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 206      ggacgtggaggcgttcctgg 225
                ||||||||||||||||||||
Sbjct: 17113614 ggacgtggaggcgttcctgg 17113595
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     gggaatggctgcggcggcgg 204
               ||||||||||||||||||||
Sbjct: 3242460 gggaatggctgcggcggcgg 3242441
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>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109081

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   gggaatggctgcggcggcgg 204
             ||||||||||||||||||||
Sbjct: 32901 gggaatggctgcggcggcgg 32882
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>gb|AC125341.4| Mus musculus BAC clone RP24-459O3 from 6, complete sequence
          Length = 167607

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    cctgctcctgctcttcccac 140
              ||||||||||||||||||||
Sbjct: 102110 cctgctcctgctcttcccac 102129
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>gb|AC122293.3| Mus musculus BAC clone RP23-257O9 from 10, complete sequence
          Length = 209942

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    cctcctgctcctgctcttcc 137
              ||||||||||||||||||||
Sbjct: 203462 cctcctgctcctgctcttcc 203481
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>gb|AC124587.5| Mus musculus BAC clone RP23-132G24 from 1, complete sequence
          Length = 220046

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 27208 cctcctgctcctgctcttcc 27189



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 27151 cctcctgctcctgctcttcc 27132



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 27133 cctcctgctcctgctcttcc 27114



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 26947 cctcctgctcctgctcttcc 26928
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     cctcctgctcctgctcttcc 137
               ||||||||||||||||||||
Sbjct: 2980633 cctcctgctcctgctcttcc 2980652
to top
>emb|AL928735.9| Mouse DNA sequence from clone RP23-413M3 on chromosome 2, complete
             sequence
          Length = 187287

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cctcctgctcctgctcttcc 137
             ||||||||||||||||||||
Sbjct: 74521 cctcctgctcctgctcttcc 74540
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>gb|AC121505.14| Mus musculus chromosome 8, clone RP24-144M14, complete sequence
          Length = 163953

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 103    ctcaccaacccatcacctcctgctcctg 130
              ||||||||||||||  ||||||||||||
Sbjct: 118582 ctcaccaacccatccactcctgctcctg 118609
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>dbj|D32210.1| Mus musculus (Notch2) mRNA, complete cds
          Length = 7579

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  atcacctcctgctcctgctc 133
            ||||||||||||||||||||
Sbjct: 5017 atcacctcctgctcctgctc 4998


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,822,875
Number of Sequences: 3902068
Number of extensions: 1822875
Number of successful extensions: 54645
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53360
Number of HSP's gapped (non-prelim): 1285
length of query: 229
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 207
effective length of database: 17,147,199,772
effective search space: 3549470352804
effective search space used: 3549470352804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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