ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl33b04 |
|---|---|
| Clone Library Name | barley_pub |
>COBS_RHILO (Q98KP0) Cobalamin synthase (EC 2.-.-.-)| Length = 259 Score = 32.7 bits (73), Expect = 0.25 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +3 Query: 18 LAAASWVEPAPGILPPKIGTISLFSAARFGVGRG 119 LAAA W P G+L IG I +A RFG+ G Sbjct: 39 LAAAIWAAPVAGLLVGLIGAIVFATAERFGLAMG 72
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 30.8 bits (68), Expect = 0.95 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 69 P G PF+ R P PDA ++ G++ RP+ Sbjct: 225 PAPQGDRPFNQRAPRPDANANFGQRAPRPE 254
>STON2_HUMAN (Q8WXE9) Stonin-2 (Stoned B)| Length = 905 Score = 29.6 bits (65), Expect = 2.1 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -2 Query: 185 SSAAPPVLNPTRPGTAPFSDRIPS-PDAKSSRGKKRNRP 72 S PPV +P +P T P + IP P KKR+RP Sbjct: 241 SCPLPPVTSPLKPNTPPSASVIPDVPYNSMGSFKKRDRP 279
>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau| kinase) Length = 1321 Score = 29.6 bits (65), Expect = 2.1 Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = -1 Query: 231 RGAGPANGLAGARDRLLRS-ATRAKPDAARNGPIF-RSNSLSRRQ 103 RG GP AGAR RS A AARN RS SLSRR+ Sbjct: 1214 RGLGPGRAQAGARPPAPRSPRLPASTSAARNASASPRSQSLSRRE 1258
>ENL_HUMAN (Q03111) Protein ENL| Length = 559 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -2 Query: 188 GSSAAPPVLNPTRPGTAPFSDRIPSPDAKSSRGKK 84 GS +AP +P ++ FSD+ P+ D S+RG+K Sbjct: 307 GSRSAPGT-SPRTSSSSSFSDKKPAKDKSSTRGEK 340
>FCRL_HUMAN (Q7L513) Fc receptor-like and mucin-like 1 precursor (Fc receptor| homolog expressed in B-cells) (Fc receptor related protein X) (FcRX) (Fc receptor-like protein) Length = 359 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%) Frame = -2 Query: 197 RATGSSAAPPVLNP-----TRPGTAPFSDRIPSP 111 + SSAAPP LNP PGTAP + P P Sbjct: 261 QGASSSAAPPTLNPAPQKSAAPGTAP--EEAPGP 292
>TGM1_HUMAN (P22735) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 817 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -2 Query: 161 NPTRPGTAPFSDRIPSPDAKSSRGKKRN 78 NP +P T P + P PD +S RG R+ Sbjct: 15 NPLQPPTTPSPEPEPEPDGRSRRGGGRS 42
>EXO84_YARLI (Q6C238) Exocyst complex component EXO84| Length = 657 Score = 28.5 bits (62), Expect = 4.7 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -3 Query: 145 ERPHFQIEFPLPTPNLAAEKREIVPI-----FGGRMPGAGSTHDAAA 20 ++P+ Q L PN+ + RE V F R+PG G +DAAA Sbjct: 29 QKPYIQDSTHLQLPNVGDKDRERVGNMVKRRFSARIPGQGVPYDAAA 75
>KS6B2_HUMAN (Q9UBS0) Ribosomal protein S6 kinase beta-2 (EC 2.7.11.1) (S6K2)| (70 kDa ribosomal protein S6 kinase 2) (p70-S6KB) (p70 ribosomal S6 kinase beta) (p70 S6Kbeta) (p70 S6 kinase beta) (S6K-beta) (p70-beta) (S6 kinase-related kinase) (SRK) (Serin Length = 482 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = -2 Query: 173 PPVLNPTRPGT-APFSDRIPSPDAKSSRGKKR 81 PP+L P P T AP R PS KS RG+ R Sbjct: 448 PPLLPPPPPSTTAPLPIRPPSGTKKSKRGRGR 479
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63 P++ AP + +PSP +S G RP+LR Sbjct: 1985 PSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63 P++ AP + +PSP +S G RP+LR Sbjct: 1985 PSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016
>PSI1_SCHPO (Q09912) Protein psi1 (Protein psi)| Length = 379 Score = 28.1 bits (61), Expect = 6.2 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +1 Query: 97 LDLASGEGIRSENGAVPGRVGFSTGGAAEEPVARSGEP 210 +D+ G G R+ G +PG GG P AR P Sbjct: 153 MDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHP 190
>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)| (Proline-rich synapse associated protein 2) (ProSAP2) (SPANK-2) Length = 1815 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/48 (27%), Positives = 20/48 (41%) Frame = -3 Query: 151 GPERPHFQIEFPLPTPNLAAEKREIVPIFGGRMPGAGSTHDAAARGRG 8 GPE+ + +P E ++ + GR P + S D GRG Sbjct: 839 GPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRG 886
>MAP4_BOVIN (P36225) Microtubule-associated protein 4 (MAP 4)| (Microtubule-associated protein-U) (MAP-U) Length = 1072 Score = 27.7 bits (60), Expect = 8.1 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = -2 Query: 194 ATGSSAAPPVLNP----TRPGTAPFSDRIPSPDAKSSRGKKRNRP 72 A+GS A P P +RP T P D P P A++ +KR P Sbjct: 691 ASGSVPAAPPKRPAAATSRPSTLPSKDTKPKPVAEAKIPEKRVSP 735 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,957,880 Number of Sequences: 219361 Number of extensions: 735826 Number of successful extensions: 3323 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3322 length of database: 80,573,946 effective HSP length: 63 effective length of database: 66,754,203 effective search space used: 1602100872 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
