Clone Name | bastl33b03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NOMO2_HUMAN (Q5JPE7) Nodal modulator 2 precursor (pM5 protein 2) | 95 | 8e-20 | 2 | NOMO3_HUMAN (P69849) Nodal modulator 3 precursor (pM5 protein 3) | 95 | 8e-20 | 3 | NOMO1_HUMAN (Q15155) Nodal modulator 1 precursor (pM5) | 95 | 8e-20 | 4 | RL7_DICDI (P11874) 60S ribosomal protein L7 | 30 | 4.0 | 5 | TNR17_MOUSE (O88472) Tumor necrosis factor receptor superfamily ... | 30 | 4.0 | 6 | SPI3_VARV (P33831) Serine proteinase inhibitor 3 | 29 | 5.2 |
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>NOMO2_HUMAN (Q5JPE7) Nodal modulator 2 precursor (pM5 protein 2)| Length = 1267 Score = 95.1 bits (235), Expect = 8e-20 Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Frame = +1 Query: 109 DEIDGCGGFVEASSGLAKPRRASESKFDYSDITVELCTVDGLVKESTQCAPN-GYYFIPV 285 D + GCGGFV+ S+ + +YS I ++L T G +K T CAPN GY+ IP+ Sbjct: 34 DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPL 82 Query: 286 YDKGSFVVRVKGPKGWSWKPETVPAVID--QNGCNGNADINFQFTGFTVSGK 435 YDKG F+++++ P GWS++P TV +D + C DINF FTGF+V+GK Sbjct: 83 YDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGK 134
>NOMO3_HUMAN (P69849) Nodal modulator 3 precursor (pM5 protein 3)| Length = 1222 Score = 95.1 bits (235), Expect = 8e-20 Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Frame = +1 Query: 109 DEIDGCGGFVEASSGLAKPRRASESKFDYSDITVELCTVDGLVKESTQCAPN-GYYFIPV 285 D + GCGGFV+ S+ + +YS I ++L T G +K T CAPN GY+ IP+ Sbjct: 34 DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPL 82 Query: 286 YDKGSFVVRVKGPKGWSWKPETVPAVID--QNGCNGNADINFQFTGFTVSGK 435 YDKG F+++++ P GWS++P TV +D + C DINF FTGF+V+GK Sbjct: 83 YDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGK 134
>NOMO1_HUMAN (Q15155) Nodal modulator 1 precursor (pM5)| Length = 1222 Score = 95.1 bits (235), Expect = 8e-20 Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Frame = +1 Query: 109 DEIDGCGGFVEASSGLAKPRRASESKFDYSDITVELCTVDGLVKESTQCAPN-GYYFIPV 285 D + GCGGFV+ S+ + +YS I ++L T G +K T CAPN GY+ IP+ Sbjct: 34 DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPL 82 Query: 286 YDKGSFVVRVKGPKGWSWKPETVPAVID--QNGCNGNADINFQFTGFTVSGK 435 YDKG F+++++ P GWS++P TV +D + C DINF FTGF+V+GK Sbjct: 83 YDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGK 134
>RL7_DICDI (P11874) 60S ribosomal protein L7| Length = 245 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = +1 Query: 166 RRASESKFDYSDITVELCTVDGLVKESTQCAPNGYYFIPVYDKGSFVVRVKGPKGWSWKP 345 +RA + +Y E ++ + K S G +++P K +FV+R++G G S KP Sbjct: 49 KRAEKYVSEYHKTEREAIRLNRIAKNS------GTFYVPPAAKVAFVIRIRGINGVSPKP 102 Query: 346 ETV 354 V Sbjct: 103 RKV 105
>TNR17_MOUSE (O88472) Tumor necrosis factor receptor superfamily member 17| (B-cell maturation protein) Length = 185 Score = 29.6 bits (65), Expect = 4.0 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Frame = +1 Query: 112 EIDGCGGFVEASSGLAKPRRASESKFDYS-DITVELCTVDGLVKESTQCAPNGYYFIPVY 288 ++DG +A + L + R + F S + TVE CT + VK + + ++ +P Sbjct: 89 QLDGSAQLDKADTELTRIRAGDDRIFPRSLEYTVEECTCEDCVKSKPKGDSDHFFPLPAM 148 Query: 289 DKGS--FVVRVKGPKGWSWKPETVPAVI 366 ++G+ V G G S P + +V+ Sbjct: 149 EEGATILVTTKTGDYGKSSVPTALQSVM 176
>SPI3_VARV (P33831) Serine proteinase inhibitor 3| Length = 373 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = +1 Query: 112 EIDGCGGFVEASSGLAKPRRASESKFDYSDITVELCTVDGLVKESTQCAPNGYY 273 +ID F E SGLAKP+ SK+ Y+D+T + ++T C YY Sbjct: 75 KIDLGPAFTELISGLAKPK---TSKYTYTDLTYQSFV------DNTVCIKPSYY 119 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,631,105 Number of Sequences: 219361 Number of extensions: 1023528 Number of successful extensions: 2551 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2542 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)