>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
           complete cds
          Length = 3054

 Score =  468 bits (236), Expect = e-129
 Identities = 242/244 (99%)
 Strand = Plus / Plus

                                                                       
Query: 36  tgccagggcagggttgcacagtctagctaggtcgaaaccaaccaagacggtgcaaccttc 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgccagggcagggttgcacagtctagctaggtcgaaaccaaccaagacggtgcaaccttc 60

                                                                       
Query: 96  cgccccatcgcgtagcgcaatagccaacaccgtagcgtacccacgatgctgactgtgacc 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 61  cgccccatcgcgtagcgcaatagccaacaccgtagcgtacccacgatgctgacggcgacc 120

                                                                       
Query: 156 aagccgctagtcgggggcgcgtgtgccgcgccgtcgtcgtcggcccggcggaggacgttc 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagccgctagtcgggggcgcgtgtgccgcgccgtcgtcgtcggcccggcggaggacgttc 180

                                                                       
Query: 216 gtggtgcccgaggctcgccggaaaccaggcaatggccgccgcaccagtgtctccaaggtg 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggtgcccgaggctcgccggaaaccaggcaatggccgccgcaccagtgtctccaaggtg 240

               
Query: 276 ggca 279
           ||||
Sbjct: 241 ggca 244



 Score =  252 bits (127), Expect = 8e-64
 Identities = 129/130 (99%)
 Strand = Plus / Plus

                                                                       
Query: 318 ttgtccgccgactccaatggggcggccgttggcacggtaacccgcccggacgtccacgtc 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgtccgccgactccaatggggcggccgttggcacggtaacccgcccggacgtccacgtc 342

                                                                       
Query: 378 caggaccgcacgcacgccaccgagatgaaggccacggtgacggtgcacatgagtaaggca 437
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 caggaccgcacgcacgccaccgagatgaaggccacggtgacggtgcacatgagtaaggca 402

                     
Query: 438 gccggngttc 447
           ||||| ||||
Sbjct: 403 gccggggttc 412

>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene)
          Length = 3023

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 398 cgagatgaaggccacggtgacggtgcacatga 429
           ||||||||||||||||||| ||||||||||||
Sbjct: 326 cgagatgaaggccacggtgtcggtgcacatga 357

>ref|NM_102798.1| Arabidopsis thaliana EMB2279 AT1G30610 (EMB2279) mRNA, complete cds
          Length = 3021

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 9    cttccatcacctcctcctttcctgatctgc 38
            |||||||||||||||||||||||| |||||
Sbjct: 2689 cttccatcacctcctcctttcctgctctgc 2660

>gb|AC146539.2| Gasterosteus aculeatus clone CH213-129C17, complete sequence
          Length = 202686

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 19  ctcctcctttcctgatctgcca 40
           ||||||||||||||||||||||
Sbjct: 103 ctcctcctttcctgatctgcca 82

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 169    ggggcgcgtgtgccgcgccgtcgtcgtcg 197
              |||||||||||||||||||| || |||||
Sbjct: 996213 ggggcgcgtgtgccgcgccggcgccgtcg 996241

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 181      ccgcgccgtcgtcgtcggccc 201
                |||||||||||||||||||||
Sbjct: 11464690 ccgcgccgtcgtcgtcggccc 11464670

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 169     ggggcgcgtgtgccgcgccgtcgtcgtcg 197
               |||||||||||||||||||| || |||||
Sbjct: 2313682 ggggcgcgtgtgccgcgccggcgccgtcg 2313710

>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   ccgcgccgtcgtcgtcggccc 201
             |||||||||||||||||||||
Sbjct: 15262 ccgcgccgtcgtcgtcggccc 15242

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 169     ggggcgcgtgtgccgcgccgtcgtcgtcg 197
               |||||||||||||||||||| || |||||
Sbjct: 1861233 ggggcgcgtgtgccgcgccggcgccgtcg 1861261

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 181      ccgcgccgtcgtcgtcggccc 201
                |||||||||||||||||||||
Sbjct: 11461453 ccgcgccgtcgtcgtcggccc 11461433

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    gccgcgccgtcgtcgtcggcc 200
              |||||||||||||||||||||
Sbjct: 293702 gccgcgccgtcgtcgtcggcc 293682

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 180     gccgcgccgtcgtcgtcggcc 200
               |||||||||||||||||||||
Sbjct: 2096821 gccgcgccgtcgtcgtcggcc 2096841



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 181     ccgcgccgtcgtcgtcggcc 200
               ||||||||||||||||||||
Sbjct: 4599530 ccgcgccgtcgtcgtcggcc 4599549

>gb|AC165370.4| Mus musculus BAC clone RP23-2N3 from chromosome 10, complete sequence
          Length = 219653

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    acctcctcctttcctgatct 36
             ||||||||||||||||||||
Sbjct: 65601 acctcctcctttcctgatct 65582

>gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, complete sequence
          Length = 166421

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ccatcacctcctcctttcct 31
             ||||||||||||||||||||
Sbjct: 71068 ccatcacctcctcctttcct 71049

>gb|AC123812.3| Mus musculus BAC clone RP24-202N8 from chromosome 10, complete sequence
          Length = 176984

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     atcacctcctcctttcctga 33
              ||||||||||||||||||||
Sbjct: 123558 atcacctcctcctttcctga 123539

>gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complete sequence
          Length = 240151

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ccatcacctcctcctttcct 31
              ||||||||||||||||||||
Sbjct: 101192 ccatcacctcctcctttcct 101173

>emb|CR626944.6| Zebrafish DNA sequence from clone DKEY-103M22 in linkage group 16,
             complete sequence
          Length = 205198

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     tccttccatcacctcctcct 26
             ||||||||||||||||||||
Sbjct: 50382 tccttccatcacctcctcct 50401

>gb|AC156039.4| Mus musculus BAC clone RP23-24C2 from chromosome 10, complete
           sequence
          Length = 206634

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  acctcctcctttcctgatct 36
           ||||||||||||||||||||
Sbjct: 270 acctcctcctttcctgatct 251

>dbj|AB232922.1| Oryzias latipes hox gene cluster, complete cds, contains hoxCa
          Length = 238642

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    acgatgctgactgtgaccaa 157
              ||||||||||||||||||||
Sbjct: 117670 acgatgctgactgtgaccaa 117689

>gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomic scaffold
          Length = 211360

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    cagtgtctccaaggtgggca 279
              ||||||||||||||||||||
Sbjct: 120647 cagtgtctccaaggtgggca 120628

>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
            hypothetical protein, putative NAM protein, putative
            cis-zeatin O-glucosyltransferases, putative small nuclear
            ribonucleoprotein, putative cis-zeatin
            O-glucosyltransferase, putative glutathione peroxidase,
            putative copper-exporting ATPases, putative
            serine/threonine dehydratase, and putative actin
            depolymerizing factor genes, complete cds; and
            hypothetical protein gene, partial cds
          Length = 157237

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  gtgccgcgccgtcgtcgtcg 197
            ||||||||||||||||||||
Sbjct: 4453 gtgccgcgccgtcgtcgtcg 4472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,388,900
Number of Sequences: 3902068
Number of extensions: 2388900
Number of successful extensions: 49161
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48675
Number of HSP's gapped (non-prelim): 486
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)