ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EPL1_NEUCR (Q7S747) Enhancer of polycomb-like protein 1 28 7.2
2UL50_HCMVA (P16791) Protein UL50 (HFLF4 protein) 27 9.4

>EPL1_NEUCR (Q7S747) Enhancer of polycomb-like protein 1|
          Length = 589

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 85  LDSPRHLPPVPALCRRDTRDEESLAPP 165
           LD P+  PP P   R   +DE+SLA P
Sbjct: 422 LDKPKPNPPPPVKFRGVAQDEQSLAHP 448



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>UL50_HCMVA (P16791) Protein UL50 (HFLF4 protein)|
          Length = 397

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 133 HDGTAPAREGGGAANQGMVDQPPPAAA*SWQI 38
           H   +P     G A  G    PPP AA SW++
Sbjct: 223 HPSCSPTMVAAGGAAAGPRPPPPPMAAGSWRL 254


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.136    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,504,090
Number of Sequences: 219361
Number of extensions: 674777
Number of successful extensions: 1891
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1889
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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