ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 48 0.020
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
3emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4,... 48 0.020
4dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 48 0.020
5gb|AF331669.1|AF331669 Dromaius novaehollandiae lysosomal alpha-... 44 0.31
6gb|AF331668.1|AF331668 Dromaius novaehollandiae lysosomal alpha-... 44 0.31
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
8dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
9dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
10ref|XM_463582.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
11gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.2
12emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.2
13emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.2
14dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
16gb|AE004613.1| Pseudomonas aeruginosa PAO1, section 174 of 529 o... 42 1.2
17dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
18dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
19dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.2
20ref|NM_185036.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
21ref|XM_450702.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
22gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
23ref|NM_001012957.1| Homo sapiens disrupted in schizophrenia 1 (D... 40 4.8
24ref|NM_018662.2| Homo sapiens disrupted in schizophrenia 1 (DISC... 40 4.8
25ref|NM_001012958.1| Homo sapiens disrupted in schizophrenia 1 (D... 40 4.8
26ref|NM_001012959.1| Homo sapiens disrupted in schizophrenia 1 (D... 40 4.8
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.8
28emb|Z81546.1|CEF53A2 Caenorhabditis elegans Cosmid F53A2, comple... 40 4.8
29emb|AL626763.11| Human DNA sequence from clone RP11-17H4 on chro... 40 4.8
30gb|AC108750.3| Homo sapiens 3 BAC RP11-249L12 (Roswell Park Canc... 40 4.8
31gb|AE011816.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.8
32gb|CP000249.1| Frankia sp. CcI3, complete genome 40 4.8
33ref|NM_067350.3| Caenorhabditis elegans Initiation Factor 4E (eI... 40 4.8
34dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
39dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.8
40gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom... 40 4.8
41gb|AF424549.1| Oryza sativa (japonica cultivar-group) MADS-box p... 40 4.8
42gb|AF222982.1|AF222982 Homo sapiens DISC1 gene, exon 1 40 4.8
43gb|AF222980.1|AF222980 Homo sapiens disrupted in Schizophrenia 1... 40 4.8
44dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
45dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
46dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
47dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
48dbj|AP005631.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
49dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
50dbj|AK103717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
51gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 4.8
52dbj|AK064713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
53dbj|AK063420.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
54gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
55gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
56emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.8
57emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.8
58gb|BC038954.1| Homo sapiens cDNA clone IMAGE:5756143, containing... 40 4.8
59emb|AJ506178.1|HSA506178 Homo sapiens mRNA for disrupted in schi... 40 4.8
60emb|AJ506177.1|HSA506177 Homo sapiens mRNA for disrupted in schi... 40 4.8
61dbj|AB007926.1| Homo sapiens mRNA for KIAA0457 protein, partial cds 40 4.8 
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
             sequence
          Length = 121130

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 188   gccacggccacggcggcgccggtggtca 215
             ||||||||||||||||||||||| ||||
Sbjct: 56428 gccacggccacggcggcgccggttgtca 56455
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 188      gccacggccacggcggcgccggtggtca 215
                ||||||||||||||||||||||| ||||
Sbjct: 21990506 gccacggccacggcggcgccggttgtca 21990533
to top
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20,
             complete sequence
          Length = 99855

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 188   gccacggccacggcggcgccggtggtca 215
             ||||||||||||||||||||||| ||||
Sbjct: 63077 gccacggccacggcggcgccggttgtca 63104
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 229     gtggccgcggcggtgatgccgagg 252
               ||||||||||||||||||||||||
Sbjct: 3006801 gtggccgcggcggtgatgccgagg 3006824



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      caaatctgccagctttaggc 55
               ||||||||||||||||||||
Sbjct: 7695397 caaatctgccagctttaggc 7695416
to top
>gb|AF331669.1|AF331669 Dromaius novaehollandiae lysosomal alpha-N-acetyl glucosaminidase
           gene, complete cds
          Length = 4217

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 188 gccacggccacggcggcgccgg 209
           ||||||||||||||||||||||
Sbjct: 263 gccacggccacggcggcgccgg 242
to top
>gb|AF331668.1|AF331668 Dromaius novaehollandiae lysosomal alpha-N-acetyl glucosaminidase
           mRNA, complete cds
          Length = 2949

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 188 gccacggccacggcggcgccgg 209
           ||||||||||||||||||||||
Sbjct: 263 gccacggccacggcggcgccgg 242
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 188      gccacggccacggcggcgccgg 209
                ||||||||||||||||||||||
Sbjct: 22257196 gccacggccacggcggcgccgg 22257217



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 57      gccgccggcggcggctgatc 76
               ||||||||||||||||||||
Sbjct: 9231765 gccgccggcggcggctgatc 9231784
to top
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1267B06
          Length = 156989

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 188   gccacggccacggcggcgccgg 209
             ||||||||||||||||||||||
Sbjct: 15840 gccacggccacggcggcgccgg 15861
to top
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1342F01
          Length = 153287

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 188    gccacggccacggcggcgccgg 209
              ||||||||||||||||||||||
Sbjct: 153040 gccacggccacggcggcgccgg 153061
to top
>ref|XM_463582.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 903

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 52  aggccgccgccggcggcggct 72
           |||||||||||||||||||||
Sbjct: 454 aggccgccgccggcggcggct 434
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 189     ccacggccacggcggcgccgg 209
               |||||||||||||||||||||
Sbjct: 1189676 ccacggccacggcggcgccgg 1189656
to top
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 189    ccacggccacggcggcgccgg 209
              |||||||||||||||||||||
Sbjct: 155843 ccacggccacggcggcgccgg 155823
to top
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 189    ccacggccacggcggcgccgg 209
              |||||||||||||||||||||
Sbjct: 203090 ccacggccacggcggcgccgg 203070
to top
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0497A05
          Length = 130919

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    aggccgccgccggcggcggct 72
             |||||||||||||||||||||
Sbjct: 65062 aggccgccgccggcggcggct 65042
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 52       aggccgccgccggcggcggct 72
                |||||||||||||||||||||
Sbjct: 39510620 aggccgccgccggcggcggct 39510600



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 54       gccgccgccggcggcggctga 74
                |||||||||||||||||||||
Sbjct: 38712257 gccgccgccggcggcggctga 38712237
to top
>gb|AE004613.1| Pseudomonas aeruginosa PAO1, section 174 of 529 of the complete
            genome
          Length = 20342

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 96   gcgccacctccctcccgtgccggcg 120
            |||||||||||| ||||||||||||
Sbjct: 3554 gcgccacctcccgcccgtgccggcg 3578
to top
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1417F08
          Length = 155536

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    aggccgccgccggcggcggct 72
             |||||||||||||||||||||
Sbjct: 85634 aggccgccgccggcggcggct 85614
to top
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1099D03
          Length = 191022

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     gccgccgccggcggcggctga 74
              |||||||||||||||||||||
Sbjct: 170230 gccgccgccggcggcggctga 170210
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 236     cggcggtgatgccgagggaga 256
               |||||||||||||||||||||
Sbjct: 2828310 cggcggtgatgccgagggaga 2828330
to top
>ref|NM_185036.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2375

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 gccgccgccggcggcggctg 73
          ||||||||||||||||||||
Sbjct: 49 gccgccgccggcggcggctg 30
to top
>ref|XM_450702.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1563

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   gccgccgccggcggcggctg 73
            ||||||||||||||||||||
Sbjct: 1155 gccgccgccggcggcggctg 1136
to top
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09
              map S1559, complete sequence
          Length = 190721

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ccgccgccggcggcggctga 74
              ||||||||||||||||||||
Sbjct: 182705 ccgccgccggcggcggctga 182686
to top
>ref|NM_001012957.1| Homo sapiens disrupted in schizophrenia 1 (DISC1), transcript
           variant Lv, mRNA
          Length = 7003

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 101 gccgccgccggcggcggctg 82
to top
>ref|NM_018662.2| Homo sapiens disrupted in schizophrenia 1 (DISC1), transcript
           variant L, mRNA
          Length = 7069

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 101 gccgccgccggcggcggctg 82
to top
>ref|NM_001012958.1| Homo sapiens disrupted in schizophrenia 1 (DISC1), transcript
           variant Es, mRNA
          Length = 2636

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 101 gccgccgccggcggcggctg 82
to top
>ref|NM_001012959.1| Homo sapiens disrupted in schizophrenia 1 (DISC1), transcript
           variant S, mRNA
          Length = 2230

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 101 gccgccgccggcggcggctg 82
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 54       gccgccgccggcggcggctg 73
                ||||||||||||||||||||
Sbjct: 33060137 gccgccgccggcggcggctg 33060118
to top
>emb|Z81546.1|CEF53A2 Caenorhabditis elegans Cosmid F53A2, complete sequence
          Length = 42724

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 307   aaatggtcggtgctatttggctgg 330
             ||||||||| ||||||||||||||
Sbjct: 26009 aaatggtcgatgctatttggctgg 26032
to top
>emb|AL626763.11| Human DNA sequence from clone RP11-17H4 on chromosome 1 Contains the 3'
             end of the TSNAX gene for translin-associated factor X, a
             novel gene, the 5' end of the DISC1 gene for disrupted in
             schizophrenia 1 and a CpG island, complete sequence
          Length = 69203

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    gccgccgccggcggcggctg 73
             ||||||||||||||||||||
Sbjct: 65622 gccgccgccggcggcggctg 65603
to top
>gb|AC108750.3| Homo sapiens 3 BAC RP11-249L12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155484

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tggggggttgcaggggaaat 25
             ||||||||||||||||||||
Sbjct: 75668 tggggggttgcaggggaaat 75687
to top
>gb|AE011816.1| Xanthomonas axonopodis pv. citri str. 306,  section 194 of 469 of the
            complete genome
          Length = 14077

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  cggccacggcggcgccggtg 211
            ||||||||||||||||||||
Sbjct: 1967 cggccacggcggcgccggtg 1948
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 52      aggccgccgccggcggcggc 71
               ||||||||||||||||||||
Sbjct: 3447255 aggccgccgccggcggcggc 3447236
to top
>ref|NM_067350.3| Caenorhabditis elegans Initiation Factor 4E (eIF4E) family member
           (ife-1) (ife-1) mRNA, complete cds
          Length = 1188

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 307 aaatggtcggtgctatttggctgg 330
           ||||||||| ||||||||||||||
Sbjct: 386 aaatggtcgatgctatttggctgg 409
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 54       gccgccgccggcggcggctg 73
                ||||||||||||||||||||
Sbjct: 24014531 gccgccgccggcggcggctg 24014512



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 52       aggccgccgccggcggcggc 71
                ||||||||||||||||||||
Sbjct: 23036551 aggccgccgccggcggcggc 23036532



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 52       aggccgccgccggcggcggc 71
                ||||||||||||||||||||
Sbjct: 23036530 aggccgccgccggcggcggc 23036549
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      ccgccgccggcggcggctga 74
               ||||||||||||||||||||
Sbjct: 3815033 ccgccgccggcggcggctga 3815014
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 54       gccgccgccggcggcggctg 73
                ||||||||||||||||||||
Sbjct: 15729979 gccgccgccggcggcggctg 15729998



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 54       gccgccgccggcggcggctg 73
                ||||||||||||||||||||
Sbjct: 12313256 gccgccgccggcggcggctg 12313237
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 53       ggccgccgccggcggcggct 72
                ||||||||||||||||||||
Sbjct: 25654186 ggccgccgccggcggcggct 25654205



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 55      ccgccgccggcggcggctgatcta 78
               ||||||||||||||||| ||||||
Sbjct: 5393303 ccgccgccggcggcggcggatcta 5393280
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 54       gccgccgccggcggcggctg 73
                ||||||||||||||||||||
Sbjct: 33150647 gccgccgccggcggcggctg 33150628
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 198     cggcggcgccggtggtcagggcgg 221
               ||||||||||||||||||| ||||
Sbjct: 6435154 cggcggcgccggtggtcagcgcgg 6435177
to top
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete
             sequence
          Length = 139823

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gccgccgccggcggcggctg 73
             ||||||||||||||||||||
Sbjct: 63171 gccgccgccggcggcggctg 63190
to top
>gb|AF424549.1| Oryza sativa (japonica cultivar-group) MADS-box protein SPW1 (SPW1)
            gene, complete cds
          Length = 4842

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   aggccgccgccggcggcggc 71
            ||||||||||||||||||||
Sbjct: 4207 aggccgccgccggcggcggc 4188
to top
>gb|AF222982.1|AF222982 Homo sapiens DISC1 gene, exon 1
          Length = 2491

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 953 gccgccgccggcggcggctg 934
to top
>gb|AF222980.1|AF222980 Homo sapiens disrupted in Schizophrenia 1 protein (DISC1) mRNA,
           complete cds
          Length = 6930

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 101 gccgccgccggcggcggctg 82
to top
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0458E02
          Length = 154458

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    ggccgccgccggcggcggct 72
             ||||||||||||||||||||
Sbjct: 77631 ggccgccgccggcggcggct 77650
to top
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0529B09
          Length = 138188

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    ccgccgccggcggcggctgatcta 78
             ||||||||||||||||| ||||||
Sbjct: 24237 ccgccgccggcggcggcggatcta 24214
to top
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0039E17
          Length = 144126

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gccgccgccggcggcggctg 73
             ||||||||||||||||||||
Sbjct: 15165 gccgccgccggcggcggctg 15184
to top
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0016E03
          Length = 152934

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     gccgccgccggcggcggctg 73
              ||||||||||||||||||||
Sbjct: 121286 gccgccgccggcggcggctg 121305
to top
>dbj|AP005631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0049K19
          Length = 131932

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gccgccggcggcggctgatc 76
             ||||||||||||||||||||
Sbjct: 91483 gccgccggcggcggctgatc 91502
to top
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1168F12
          Length = 141524

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    gccgccgccggcggcggctg 73
             ||||||||||||||||||||
Sbjct: 96810 gccgccgccggcggcggctg 96791
to top
>dbj|AK103717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138A01, full
           insert sequence
          Length = 966

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 257 gccgccgccggcggcggctg 238
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 184     gcctgccacggccacggcgg 203
               ||||||||||||||||||||
Sbjct: 1673531 gcctgccacggccacggcgg 1673512
to top
>dbj|AK064713.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-D01,
          full insert sequence
          Length = 714

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 gccgccgccggcggcggctg 73
          ||||||||||||||||||||
Sbjct: 99 gccgccgccggcggcggctg 80
to top
>dbj|AK063420.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-C03,
          full insert sequence
          Length = 1758

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 gccgccgccggcggcggctg 73
          ||||||||||||||||||||
Sbjct: 76 gccgccgccggcggcggctg 57
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      ccgccgccggcggcggctga 74
               ||||||||||||||||||||
Sbjct: 3823727 ccgccgccggcggcggctga 3823708
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 54       gccgccgccggcggcggctg 73
                ||||||||||||||||||||
Sbjct: 23942737 gccgccgccggcggcggctg 23942718



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 52       aggccgccgccggcggcggc 71
                ||||||||||||||||||||
Sbjct: 22964742 aggccgccgccggcggcggc 22964723



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 52       aggccgccgccggcggcggc 71
                ||||||||||||||||||||
Sbjct: 22964721 aggccgccgccggcggcggc 22964740
to top
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aggccgccgccggcggcggc 71
              ||||||||||||||||||||
Sbjct: 145828 aggccgccgccggcggcggc 145809



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aggccgccgccggcggcggc 71
              ||||||||||||||||||||
Sbjct: 145807 aggccgccgccggcggcggc 145826
to top
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 176388

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gccgccgccggcggcggctg 73
             ||||||||||||||||||||
Sbjct: 72865 gccgccgccggcggcggctg 72884
to top
>gb|BC038954.1| Homo sapiens cDNA clone IMAGE:5756143, containing frame-shift
          errors
          Length = 2228

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 gccgccgccggcggcggctg 73
          ||||||||||||||||||||
Sbjct: 70 gccgccgccggcggcggctg 51
to top
>emb|AJ506178.1|HSA506178 Homo sapiens mRNA for disrupted in schizophrenia 1 (DISC1 gene),
           isoform E
          Length = 2636

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 101 gccgccgccggcggcggctg 82
to top
>emb|AJ506177.1|HSA506177 Homo sapiens mRNA for disrupted in schizophrenia 1 (DISC1 gene),
           short isoform
          Length = 2206

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gccgccgccggcggcggctg 73
           ||||||||||||||||||||
Sbjct: 101 gccgccgccggcggcggctg 82
to top
>dbj|AB007926.1| Homo sapiens mRNA for KIAA0457 protein, partial cds
          Length = 6833

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 gccgccgccggcggcggctg 73
          ||||||||||||||||||||
Sbjct: 87 gccgccgccggcggcggctg 68


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,649,652
Number of Sequences: 3902068
Number of extensions: 2649652
Number of successful extensions: 79207
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76665
Number of HSP's gapped (non-prelim): 2540
length of query: 363
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 341
effective length of database: 17,147,199,772
effective search space: 5847195122252
effective search space used: 5847195122252
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top