>PHC3_MOUSE (Q8CHP6) Polyhomeotic-like protein 3|
          Length = 981

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/58 (24%), Positives = 21/58 (36%)
 Frame = +3

Query: 3   HCFYFPSRGHPSNPLRTPPEHHRPEENPSPSXXXXXXXXXXXXXSIPTRIHPPFNPTQ 176
           HC   P+ G    P    P+H  P ++  P              S+     PP +P+Q
Sbjct: 348 HCIPLPNHGLSPAPSNAQPQHCSPVQSHPPPLTVSPNQAQSAQQSVVVSPPPPHSPSQ 405

>SET2_CAEEL (Q18221) Protein set-2|
          Length = 1507

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 18  PSRGHPSNPLRTPPEHHRPEENPS 89
           P +GHPS  L+TP +H +P+  P+
Sbjct: 558 PPKGHPSVHLQTPYQHVQPQMIPA 581

>GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 protein)|
           (E(spl)m9/10)
          Length = 719

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 33  PSNPLRTPPEHHRPEENPS 89
           P   L  PPEHHRP+  P+
Sbjct: 161 PQGLLNKPPEHHRPDIKPT 179

>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)|
          Length = 1002

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 15  FPSRGHPSNPLRTPPEHHRPEENPSP 92
           FP+   P   +  PP HH+P E+  P
Sbjct: 197 FPAHHEPGEHMPPPPMHHKPGEHMPP 222

>IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Iroquois|
           homeobox protein 3) (Homeodomain protein IRXB1)
          Length = 507

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = -2

Query: 242 TLGISCCGAAGAPPSSRRISGRLGGVEGWMNPSWDG---SPRSHSTS 111
           TL +S   AA A  + R +S  LG    W N  + G    PR H  S
Sbjct: 385 TLQLSPAAAAAAAAAHRLVSAPLGKFPAWTNRPFPGPPAGPRPHPLS 431

>LCE1A_HUMAN (Q5T7P2) Late cornified envelope protein 1A (Late envelope protein|
           1)
          Length = 110

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 194 CCSAEHQQHRSTRFRGFSSAPMSAPA 271
           CC + H++HRS R R  SS   S P+
Sbjct: 67  CCLSHHRRHRSHRHRLQSSGCCSQPS 92

>CYB_NANAN (Q8LZ88) Cytochrome b|
          Length = 378

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 18  PSRGHPSNPLRTPPEHHRPE 77
           P   HP+NPL TPP H +PE
Sbjct: 253 PDNLHPANPLVTPP-HIKPE 271

>AROC_STRCO (Q9KXQ4) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 394

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 212 GAPPSSRRISGRLGGVEG 159
           G P   RR+SGR GG EG
Sbjct: 285 GTPDGIRRVSGRSGGTEG 302

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 30   HPSNPLRTPPEHHRPEENPSPS 95
            HP+ P  +P E  RP + PSPS
Sbjct: 4031 HPTPPPSSPQEPKRPSQLPSPS 4052


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,495,967
Number of Sequences: 219361
Number of extensions: 680505
Number of successful extensions: 2824
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)