Clone Name | bastl33a08 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_193788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2865 Score = 430 bits (217), Expect = e-117 Identities = 404/465 (86%), Gaps = 1/465 (0%) Strand = Plus / Plus Query: 4 tacaagggtccaccacaggaccgggcagcacccacctcttacacttttgataaggtgttt 63 |||||||| || |||||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 199 tacaagggccccccacaggatcgggctgcacccacctcttacactttcgacaaggtgttt 258 Query: 64 gggccagcatgccagacagacttggtttatgaagatggagctaaggatgttgctatgtct 123 || ||||| | ||||||||| |||| |||||||| |||||||||||||||||||||||| Sbjct: 259 ggaccagcttcccagacagaagtggtgtatgaagagggagctaaggatgttgctatgtct 318 Query: 124 gcattgacaggcattaatgccacgatctttgcttatggtcagacaagtagtgggaaaaca 183 ||||||||||||||||||||||| || ||||| |||||||| || || ||||| || ||| Sbjct: 319 gcattgacaggcattaatgccaccatttttgcctatggtcaaaccagcagtggtaagaca 378 Query: 184 ttcaccatgagaggtgtgacagagagcgctgtccgtgacatttacaaacacatcgaaaac 243 |||||||||||||| || |||||||| ||||| ||| || |||| ||||| ||||| Sbjct: 379 ttcaccatgagaggcgtcacagagagtgctgtaaatgatatatacaggcacatagaaaat 438 Query: 244 aatcctgaaagggaattcattatcaagatatctgctatggaaatatacaatgagaatgtg 303 | |||||| ||||| || || ||||||||||||||||||||||| |||||||||| |||| Sbjct: 439 actcctgagagggactttatcatcaagatatctgctatggaaatttacaatgagattgtg 498 Query: 304 aaggatcttctacgacccgactctgggccccttcgcttgttagatgatcctgagaaagga 363 ||||||||||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 499 aaggatcttctacgacctgagtctaccaatcttcgcttgttagatgatcctgagaaagga 558 Query: 364 accatcgtggagaagttggatgaagaaattgccaaggatagccaacatctaaggcatcta 423 || || || || || |||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 559 acaattgtagaaaaactggaagaagaaattgccaaggatagccaacatcttaggcatcta 618 Query: 424 ataggcatttgtgaagaac-aagacaggttggggaaactgcacta 467 || | ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 619 atcagtatttgtgaagaacaaagacaggttggggagactgcacta 663
>dbj|AK103077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118E11, full insert sequence Length = 3779 Score = 430 bits (217), Expect = e-117 Identities = 404/465 (86%), Gaps = 1/465 (0%) Strand = Plus / Plus Query: 4 tacaagggtccaccacaggaccgggcagcacccacctcttacacttttgataaggtgttt 63 |||||||| || |||||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 505 tacaagggccccccacaggatcgggctgcacccacctcttacactttcgacaaggtgttt 564 Query: 64 gggccagcatgccagacagacttggtttatgaagatggagctaaggatgttgctatgtct 123 || ||||| | ||||||||| |||| |||||||| |||||||||||||||||||||||| Sbjct: 565 ggaccagcttcccagacagaagtggtgtatgaagagggagctaaggatgttgctatgtct 624 Query: 124 gcattgacaggcattaatgccacgatctttgcttatggtcagacaagtagtgggaaaaca 183 ||||||||||||||||||||||| || ||||| |||||||| || || ||||| || ||| Sbjct: 625 gcattgacaggcattaatgccaccatttttgcctatggtcaaaccagcagtggtaagaca 684 Query: 184 ttcaccatgagaggtgtgacagagagcgctgtccgtgacatttacaaacacatcgaaaac 243 |||||||||||||| || |||||||| ||||| ||| || |||| ||||| ||||| Sbjct: 685 ttcaccatgagaggcgtcacagagagtgctgtaaatgatatatacaggcacatagaaaat 744 Query: 244 aatcctgaaagggaattcattatcaagatatctgctatggaaatatacaatgagaatgtg 303 | |||||| ||||| || || ||||||||||||||||||||||| |||||||||| |||| Sbjct: 745 actcctgagagggactttatcatcaagatatctgctatggaaatttacaatgagattgtg 804 Query: 304 aaggatcttctacgacccgactctgggccccttcgcttgttagatgatcctgagaaagga 363 ||||||||||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 805 aaggatcttctacgacctgagtctaccaatcttcgcttgttagatgatcctgagaaagga 864 Query: 364 accatcgtggagaagttggatgaagaaattgccaaggatagccaacatctaaggcatcta 423 || || || || || |||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 865 acaattgtagaaaaactggaagaagaaattgccaaggatagccaacatcttaggcatcta 924 Query: 424 ataggcatttgtgaagaac-aagacaggttggggaaactgcacta 467 || | ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 925 atcagtatttgtgaagaacaaagacaggttggggagactgcacta 969
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 55 aaggtgtttgggccagcatgccagacagacttggtttatgaagatggagctaaggatgtt 114 ||||||||||| ||||| | ||||||||| |||| |||||||| ||||||||||||||| Sbjct: 18148799 aaggtgtttggaccagcttcccagacagaagtggtgtatgaagagggagctaaggatgtt 18148858 Query: 115 gctatgtctgcattgacaggcattaatg 142 |||||||||||||||||||||||||||| Sbjct: 18148859 gctatgtctgcattgacaggcattaatg 18148886 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 246 tcctgaaagggaattcattatcaagatatctgctatggaaatatacaatgagaatgtgaa 305 |||||| ||||| || || ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 18149176 tcctgagagggactttatcatcaagatatctgctatggaaatttacaatgagattgtgaa 18149235 Query: 306 ggatcttctacgacccgactctgggccccttcgcttgttagatgatcctgag 357 ||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct: 18149236 ggatcttctacgacctgagtctaccaatcttcgcttgttagatgatcctgag 18149287 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 380 tggatgaagaaattgccaaggatagccaacatctaaggcatctaataggcatttgtgaag 439 |||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct: 18149403 tggaagaagaaattgccaaggatagccaacatcttaggcatctaatcagtatttgtgaag 18149462 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 4 tacaagggtccaccacaggaccgggcagcacccacctcttacacttt 50 |||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 18148594 tacaagggccccccacaggatcgggctgcacccacctcttacacttt 18148640 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 142 gccacgatctttgcttatggtcagacaagtagtgggaaaacattcaccatgagaggtgtg 201 ||||| || ||||| |||||||| || || ||||| || ||||||||||||||||| || Sbjct: 18148971 gccaccatttttgcctatggtcaaaccagcagtggtaagacattcaccatgagaggcgtc 18149030 Query: 202 acagagagcgctgt 215 |||||||| ||||| Sbjct: 18149031 acagagagtgctgt 18149044 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 443 aagacaggttggggaaactgcacta 467 ||||||||||||||| ||||||||| Sbjct: 18149596 aagacaggttggggagactgcacta 18149620
>dbj|AP003202.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1075D06 Length = 130528 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 55 aaggtgtttgggccagcatgccagacagacttggtttatgaagatggagctaaggatgtt 114 ||||||||||| ||||| | ||||||||| |||| |||||||| ||||||||||||||| Sbjct: 244 aaggtgtttggaccagcttcccagacagaagtggtgtatgaagagggagctaaggatgtt 303 Query: 115 gctatgtctgcattgacaggcattaatg 142 |||||||||||||||||||||||||||| Sbjct: 304 gctatgtctgcattgacaggcattaatg 331 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 246 tcctgaaagggaattcattatcaagatatctgctatggaaatatacaatgagaatgtgaa 305 |||||| ||||| || || ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 621 tcctgagagggactttatcatcaagatatctgctatggaaatttacaatgagattgtgaa 680 Query: 306 ggatcttctacgacccgactctgggccccttcgcttgttagatgatcctgag 357 ||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct: 681 ggatcttctacgacctgagtctaccaatcttcgcttgttagatgatcctgag 732 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 380 tggatgaagaaattgccaaggatagccaacatctaaggcatctaataggcatttgtgaag 439 |||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct: 848 tggaagaagaaattgccaaggatagccaacatcttaggcatctaatcagtatttgtgaag 907 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 4 tacaagggtccaccacaggaccgggcagcacccacctcttacacttt 50 |||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 39 tacaagggccccccacaggatcgggctgcacccacctcttacacttt 85 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 142 gccacgatctttgcttatggtcagacaagtagtgggaaaacattcaccatgagaggtgtg 201 ||||| || ||||| |||||||| || || ||||| || ||||||||||||||||| || Sbjct: 416 gccaccatttttgcctatggtcaaaccagcagtggtaagacattcaccatgagaggcgtc 475 Query: 202 acagagagcgctgt 215 |||||||| ||||| Sbjct: 476 acagagagtgctgt 489 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 443 aagacaggttggggaaactgcacta 467 ||||||||||||||| ||||||||| Sbjct: 1041 aagacaggttggggagactgcacta 1065
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 55 aaggtgtttgggccagcatgccagacagacttggtttatgaagatggagctaaggatgtt 114 ||||||||||| ||||| | ||||||||| |||| |||||||| ||||||||||||||| Sbjct: 125240 aaggtgtttggaccagcttcccagacagaagtggtgtatgaagagggagctaaggatgtt 125299 Query: 115 gctatgtctgcattgacaggcattaatg 142 |||||||||||||||||||||||||||| Sbjct: 125300 gctatgtctgcattgacaggcattaatg 125327 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 246 tcctgaaagggaattcattatcaagatatctgctatggaaatatacaatgagaatgtgaa 305 |||||| ||||| || || ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 125617 tcctgagagggactttatcatcaagatatctgctatggaaatttacaatgagattgtgaa 125676 Query: 306 ggatcttctacgacccgactctgggccccttcgcttgttagatgatcctgag 357 ||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct: 125677 ggatcttctacgacctgagtctaccaatcttcgcttgttagatgatcctgag 125728 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 380 tggatgaagaaattgccaaggatagccaacatctaaggcatctaataggcatttgtgaag 439 |||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct: 125844 tggaagaagaaattgccaaggatagccaacatcttaggcatctaatcagtatttgtgaag 125903 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 4 tacaagggtccaccacaggaccgggcagcacccacctcttacacttt 50 |||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 125035 tacaagggccccccacaggatcgggctgcacccacctcttacacttt 125081 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 142 gccacgatctttgcttatggtcagacaagtagtgggaaaacattcaccatgagaggtgtg 201 ||||| || ||||| |||||||| || || ||||| || ||||||||||||||||| || Sbjct: 125412 gccaccatttttgcctatggtcaaaccagcagtggtaagacattcaccatgagaggcgtc 125471 Query: 202 acagagagcgctgt 215 |||||||| ||||| Sbjct: 125472 acagagagtgctgt 125485 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 443 aagacaggttggggaaactgcacta 467 ||||||||||||||| ||||||||| Sbjct: 126037 aagacaggttggggagactgcacta 126061
>gb|AF272750.1|AF272750 Zea mays kinesin heavy chain (KIN2) mRNA, partial cds Length = 2598 Score = 103 bits (52), Expect = 5e-19 Identities = 77/84 (91%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 385 gaagaaattgccaaggatagccaacatctaaggcatctaataggcatttgtgaagaac-a 443 ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| | Sbjct: 12 gaagaaattgcgaaggatagccaacatctgaggcatctaatcagcatttgtgaagaacaa 71 Query: 444 agacaggttggggaaactgcacta 467 |||||||||||||| || |||||| Sbjct: 72 agacaggttggggagacggcacta 95
>ref|NM_101695.3| Arabidopsis thaliana HIK (HINKEL); ATP binding / microtubule motor AT1G18370 (HIK) mRNA, complete cds Length = 3007 Score = 63.9 bits (32), Expect = 4e-07 Identities = 167/212 (78%) Strand = Plus / Plus Query: 91 tatgaagatggagctaaggatgttgctatgtctgcattgacaggcattaatgccacgatc 150 ||||||||||| | |||| ||||||| ||||||| |||| ||||| ||||| || || Sbjct: 280 tatgaagatggtgttaagaatgttgcattgtctgctttgatgggcataaatgcaacaata 339 Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatgagaggtgtgacagagagc 210 ||||| ||||| || ||||| ||||| || |||| ||||||||||| || || |||| Sbjct: 340 tttgcatatggacaaacaagcagtggaaagacatataccatgagaggagtaacggagaaa 399 Query: 211 gctgtccgtgacatttacaaacacatcgaaaacaatcctgaaagggaattcattatcaag 270 |||||| ||| |||||||| ||||| || | |||||||| || || | ||||||| Sbjct: 400 gctgtcaatgatatttacaatcacataattaagacccctgaaagagattttactatcaag 459 Query: 271 atatctgctatggaaatatacaatgagaatgt 302 || |||| | |||||||||| ||||| ||||| Sbjct: 460 atttctggtctggaaatatataatgaaaatgt 491
>dbj|AB081599.1| Arabidopsis thaliana mRNA for AtNACK1 kinesin-like protein, complete cds Length = 2925 Score = 63.9 bits (32), Expect = 4e-07 Identities = 167/212 (78%) Strand = Plus / Plus Query: 91 tatgaagatggagctaaggatgttgctatgtctgcattgacaggcattaatgccacgatc 150 ||||||||||| | |||| ||||||| ||||||| |||| ||||| ||||| || || Sbjct: 280 tatgaagatggtgttaagaatgttgcattgtctgctttgatgggcataaatgcaacaata 339 Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatgagaggtgtgacagagagc 210 ||||| ||||| || ||||| ||||| || |||| ||||||||||| || || |||| Sbjct: 340 tttgcatatggacaaacaagcagtggaaagacatataccatgagaggagtaacggagaaa 399 Query: 211 gctgtccgtgacatttacaaacacatcgaaaacaatcctgaaagggaattcattatcaag 270 |||||| ||| |||||||| ||||| || | |||||||| || || | ||||||| Sbjct: 400 gctgtcaatgatatttacaatcacataattaagacccctgaaagagattttactatcaag 459 Query: 271 atatctgctatggaaatatacaatgagaatgt 302 || |||| | |||||||||| ||||| ||||| Sbjct: 460 atttctggtctggaaatatataatgaaaatgt 491
>dbj|AB071436.1| Nicotiana tabacum nack2 mRNA for kinesin-like protein NACK2, complete cds Length = 3114 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatgagagg 197 ||||| ||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 440 tttgcatatgggcagacaagtagtgggaagacattcacaatgagagg 486
>ref|NM_114189.2| Arabidopsis thaliana TES (TETRASPORE); microtubule motor AT3G43210 (TES) mRNA, complete cds Length = 3193 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 326 ctgggccccttcgcttgttagatgatcctgagaaaggaaccatcgtgga 374 ||||||||||| | ||||||||||||| |||||||||||||| ||||| Sbjct: 732 ctgggccccttagactgttagatgatccagagaaaggaaccattgtgga 780 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgg 176 ||||||||||||||||| |||||||| Sbjct: 557 tttgcttatggtcagactagtagtgg 582
>emb|AJ495781.1|ATH495781 Arabidopsis thaliana mRNA for kinesin-like protein (tes gene), cultivar Col-3 Length = 3193 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 326 ctgggccccttcgcttgttagatgatcctgagaaaggaaccatcgtgga 374 ||||||||||| | ||||||||||||| |||||||||||||| ||||| Sbjct: 732 ctgggccccttagactgttagatgatccagagaaaggaaccattgtgga 780 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgg 176 ||||||||||||||||| |||||||| Sbjct: 557 tttgcttatggtcagactagtagtgg 582
>dbj|AB088121.1| Arabidopsis thaliana AtNACK2 mRNA for kinesin-like protein, complete cds Length = 2833 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 326 ctgggccccttcgcttgttagatgatcctgagaaaggaaccatcgtgga 374 ||||||||||| | ||||||||||||| |||||||||||||| ||||| Sbjct: 519 ctgggccccttagactgttagatgatccagagaaaggaaccattgtgga 567 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgg 176 ||||||||||||||||| |||||||| Sbjct: 344 tttgcttatggtcagactagtagtgg 369
>gb|AF272759.1|AF272759 Zea mays kinesin heavy chain (KIN15) mRNA, partial cds Length = 2888 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatga 193 ||||| |||||||| ||||||||||| ||||||| |||||||| Sbjct: 231 tttgcatatggtcaaacaagtagtggaaaaacatacaccatga 273
>ref|NM_118549.1| Arabidopsis thaliana ATP binding / microtubule motor AT4G24170 mRNA, complete cds Length = 3015 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 157 tatggtcagacaagtagtgggaaaacattcaccatgag 194 ||||| |||||||||||||||||||| | ||||||||| Sbjct: 262 tatggacagacaagtagtgggaaaacgtacaccatgag 299
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 157 tatggtcagacaagtagtgggaaaacattcaccatgag 194 ||||| |||||||||||||||||||| | ||||||||| Sbjct: 68036 tatggacagacaagtagtgggaaaacgtacaccatgag 68073
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 157 tatggtcagacaagtagtgggaaaacattcaccatgag 194 ||||| |||||||||||||||||||| | ||||||||| Sbjct: 11331 tatggacagacaagtagtgggaaaacgtacaccatgag 11368
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 157 tatggtcagacaagtagtgggaaaacattcaccatgag 194 ||||| |||||||||||||||||||| | ||||||||| Sbjct: 9532 tatggacagacaagtagtgggaaaacgtacaccatgag 9495
>ref|XM_538903.2| PREDICTED: Canis familiaris similar to kinesin family member 6 (LOC481782), mRNA Length = 2517 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 atctttgcttatggtcagacaagtagtgggaaaacattcaccat 191 |||||||| ||||| ||||| | |||||||||||||||||||| Sbjct: 277 atctttgcctatgggcagacgggcagtgggaaaacattcaccat 320
>ref|XM_473345.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2748 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatga 193 ||||| |||||||| ||||||||||| || |||| |||||||| Sbjct: 259 tttgcatatggtcaaacaagtagtggaaagacatacaccatga 301
>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06, complete sequence Length = 174570 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatga 193 ||||| |||||||| ||||||||||| || |||| |||||||| Sbjct: 160799 tttgcatatggtcaaacaagtagtggaaagacatacaccatga 160757
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatga 193 ||||| |||||||| ||||||||||| || |||| |||||||| Sbjct: 7439 tttgcatatggtcaaacaagtagtggaaagacatacaccatga 7397
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatga 193 ||||| |||||||| ||||||||||| || |||| |||||||| Sbjct: 26939739 tttgcatatggtcaaacaagtagtggaaagacatacaccatga 26939697
>dbj|AK102262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088K23, full insert sequence Length = 3375 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgggaaaacattcaccatga 193 ||||| |||||||| ||||||||||| || |||| |||||||| Sbjct: 631 tttgcatatggtcaaacaagtagtggaaagacatacaccatga 673
>ref|NM_114975.2| Arabidopsis thaliana ATP binding / microtubule motor AT3G51150 mRNA, complete cds Length = 3698 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 344 tagatgatcctgagaaaggaac 365 |||||||||||||||||||||| Sbjct: 857 tagatgatcctgagaaaggaac 878
>emb|AL359915.14| Human DNA sequence from clone RP11-418J17 on chromosome 1 Contains the 3' end of a novel gene, a ribosomal protein L6 (RPL6) pseudogene and the 5' end of a novel gene, complete sequence Length = 159158 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggatgttgctatgtctgcattg 129 |||||||||||||||||||||| Sbjct: 70074 ggatgttgctatgtctgcattg 70095
>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15 Length = 110800 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgg 176 ||||||||||||||||| |||||||| Sbjct: 27580 tttgcttatggtcagactagtagtgg 27605
>emb|AJ508243.1|ATH508243 Arabidopsis thaliana tes gene for putative kinesin protein, exons 1-14, cultivar Col-3 Length = 4590 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgg 176 ||||||||||||||||| |||||||| Sbjct: 510 tttgcttatggtcagactagtagtgg 535
>emb|AJ507734.1|ATH507734 Arabidopsis thaliana tes gene for putative kinesin-like protein, exons 1-14, cultivar Ws2 Length = 4570 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgg 176 ||||||||||||||||| |||||||| Sbjct: 510 tttgcttatggtcagactagtagtgg 535 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 ctgggccccttcgcttgttagatgatcc 353 ||||||||||||| ||||||||||||| Sbjct: 778 ctgggccccttcgactgttagatgatcc 805
>emb|AJ496182.1|ATH496182 Arabidopsis thaliana partial tes gene for kinesin-like protein, exons 1-14, cultivar Ler Length = 4570 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 tttgcttatggtcagacaagtagtgg 176 ||||||||||||||||| |||||||| Sbjct: 510 tttgcttatggtcagactagtagtgg 535 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 ctgggccccttcgcttgttagatgatcc 353 ||||||||||||| ||||||||||||| Sbjct: 778 ctgggccccttcgactgttagatgatcc 805
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 atatacaatgagaatgtgaaggatct 311 |||||||||||| ||||||||||||| Sbjct: 26673532 atatacaatgaggatgtgaaggatct 26673507
>dbj|AB016873.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K22F20 Length = 64827 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 atgagaatgtgaaggatcttct 314 |||||||||||||||||||||| Sbjct: 62537 atgagaatgtgaaggatcttct 62558
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 atatacaatgagaatgtgaaggatct 311 |||||||||||| ||||||||||||| Sbjct: 26601701 atatacaatgaggatgtgaaggatct 26601676
>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101173 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 atatacaatgagaatgtgaaggatct 311 |||||||||||| ||||||||||||| Sbjct: 92402 atatacaatgaggatgtgaaggatct 92377
>ref|NM_129178.1| Arabidopsis thaliana ATP binding / microtubule motor AT2G36200 mRNA, complete cds Length = 3212 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacttttgataaggtgtttgg 65 ||||||||||||||||||||| Sbjct: 202 cacttttgataaggtgtttgg 222
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 ttacaaacacatcgaaaacaa 245 ||||||||||||||||||||| Sbjct: 44943 ttacaaacacatcgaaaacaa 44923
>ref|XM_879658.1| PREDICTED: Bos taurus similar to Kinesin-like protein KIFC1 (Kinesin-like protein 2) (Kinesin-related protein HSET), transcript variant 2 (LOC510995), mRNA Length = 2298 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 148 atctttgcttatggtcagacaagtagtgggaaaacattcaccatg 192 |||||||||||||| |||||| | ||||| || || ||||||||| Sbjct: 1318 atctttgcttatggccagacaggcagtggcaagaccttcaccatg 1362
>ref|XM_588236.2| PREDICTED: Bos taurus similar to Kinesin-like protein KIFC1 (Kinesin-like protein 2) (Kinesin-related protein HSET), transcript variant 1 (LOC510995), mRNA Length = 2280 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 148 atctttgcttatggtcagacaagtagtgggaaaacattcaccatg 192 |||||||||||||| |||||| | ||||| || || ||||||||| Sbjct: 1318 atctttgcttatggccagacaggcagtggcaagaccttcaccatg 1362
>gb|AC175831.3| Mus musculus BAC clone RP24-285G1 from chromosome 3, complete sequence Length = 171981 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 aagaacaagacaggttgggga 457 ||||||||||||||||||||| Sbjct: 142711 aagaacaagacaggttgggga 142691
>gb|AC122044.3| Mus musculus BAC clone RP24-449D16 from chromosome 3, complete sequence Length = 123678 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 aagaacaagacaggttgggga 457 ||||||||||||||||||||| Sbjct: 49788 aagaacaagacaggttgggga 49768
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 ttacaaacacatcgaaaacaa 245 ||||||||||||||||||||| Sbjct: 12973046 ttacaaacacatcgaaaacaa 12973026
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 ttacaaacacatcgaaaacaa 245 ||||||||||||||||||||| Sbjct: 13053225 ttacaaacacatcgaaaacaa 13053205
>ref|NM_126029.2| Arabidopsis thaliana ATP binding / microtubule motor AT5G66310 mRNA, complete cds Length = 3740 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 250 gaaagggaattcattatcaagatatctgctatggaaatatacaatgag 297 ||||| ||||||||| | ||| | ||||||||||| || ||||||||| Sbjct: 853 gaaagagaattcattcttaagttctctgctatggagatctacaatgag 900
>gb|AC159420.1| Trypanosoma brucei chromosome 8 clone RPCI93-26A17, complete sequence Length = 142479 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 aataggcatttgtgaagaacaaga 446 |||||| ||||||||||||||||| Sbjct: 134291 aataggtatttgtgaagaacaaga 134314
>gb|AC159431.1| Trypanosoma brucei chromosome 8 clone RPCI93-28F14, complete sequence Length = 132418 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 aataggcatttgtgaagaacaaga 446 |||||| ||||||||||||||||| Sbjct: 335 aataggtatttgtgaagaacaaga 358
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 aataggcatttgtgaagaacaaga 446 |||||| ||||||||||||||||| Sbjct: 821582 aataggtatttgtgaagaacaaga 821605
>ref|XM_415936.1| PREDICTED: Gallus gallus similar to kinesin family member 21A; NY-REN-62 antigen (LOC417692), partial mRNA Length = 5008 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 149 tctttgcttatggtcagacaagtagtgggaaaacattcaccatg 192 ||||||||||||| |||||| || ||| ||||||| ||||||| Sbjct: 354 tctttgcttatggccagacaggtgctggcaaaacatacaccatg 397
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gagagcgctgtccgtgacat 224 |||||||||||||||||||| Sbjct: 817760 gagagcgctgtccgtgacat 817779
>ref|XM_842756.1| Leishmania major strain Friedlin dihydrolipoamide dehydrogenase (LMJ_0826) partial mRNA Length = 1527 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gagagcgctgtccgtgacat 224 |||||||||||||||||||| Sbjct: 834 gagagcgctgtccgtgacat 815
>ref|XM_676849.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8672.2) partial mRNA Length = 4506 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gatggagctaaggatgttgctatg 120 ||||||||||| |||||||||||| Sbjct: 3205 gatggagctaatgatgttgctatg 3228
>ref|XM_818884.1| Trypanosoma brucei TREU927 clone RPCI93-26A17 hypothetical protein (Tb927.8.2770) partial mRNA Length = 9300 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 aataggcatttgtgaagaacaaga 446 |||||| ||||||||||||||||| Sbjct: 4230 aataggtatttgtgaagaacaaga 4253
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 atctttgcttatggtcagac 167 |||||||||||||||||||| Sbjct: 81606 atctttgcttatggtcagac 81587
>emb|Z82195.2|HS274L7 Human DNA sequence from clone RP1-274L7 on chromosome X Contains a novel gene and a novel gene similar to uncharacterized hypothalamus protein HT011, complete sequence Length = 119566 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 gagaatgtgaaggatcttctacga 318 ||||||||||| |||||||||||| Sbjct: 91631 gagaatgtgaatgatcttctacga 91608
>emb|AL158051.10| Human DNA sequence from clone RP1-160B9 on chromosome 6q12-13 Contains part of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 69522 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 tggaaatatacaatgagaatgtga 304 |||||| ||||||||||||||||| Sbjct: 29696 tggaaagatacaatgagaatgtga 29673
>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence Length = 112123 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tttgtgaagaacaagacagg 450 |||||||||||||||||||| Sbjct: 93920 tttgtgaagaacaagacagg 93939
>gb|AC027308.5| Homo sapiens chromosome 5 clone CTB-56J15, complete sequence Length = 270154 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 aaaacaatcctgaaagggaa 258 |||||||||||||||||||| Sbjct: 234472 aaaacaatcctgaaagggaa 234491
>ref|XM_681901.1| PREDICTED: Danio rerio similar to chromosome 20 open reading frame 23 (LOC558657), partial mRNA Length = 556 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 atctttgcttatggtcagac 167 |||||||||||||||||||| Sbjct: 292 atctttgcttatggtcagac 311
>gb|AC091982.3| Homo sapiens chromosome 5 clone RP11-54C4, complete sequence Length = 170368 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 gaagaacaagacaggttggg 455 |||||||||||||||||||| Sbjct: 9831 gaagaacaagacaggttggg 9850
>emb|BX935579.2| Gallus gallus finished cDNA, clone ChEST78h12 Length = 1758 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 149 tctttgcttatggtcagacaagtagtgggaaaacattcaccatg 192 ||||||||||||| |||||| || ||| ||||||| ||||||| Sbjct: 369 tctttgcttatggccagacaggtgctggcaaaacatacaccatg 412
>gb|AC010312.5| Homo sapiens chromosome 5 clone CTB-62P13, complete sequence Length = 67984 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gaagaacaagacaggttggg 455 |||||||||||||||||||| Sbjct: 23084 gaagaacaagacaggttggg 23065
>gb|AF372930.1|AF372930 Arabidopsis thaliana AT5g66310/K1L20_9 mRNA, partial cds Length = 1723 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 250 gaaagggaattcattatcaagatatctgctatggaaatatacaatgag 297 ||||| ||||||||| | ||| | ||||||||||| || ||||||||| Sbjct: 853 gaaagagaattcattcttaagttctctgctatggagatctacaatgag 900
>gb|AC025594.5|AC025594 Homo sapiens chromosome 7 clone RP11-309L24, complete sequence Length = 200197 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gtgggaaaacattcaccatg 192 |||||||||||||||||||| Sbjct: 156290 gtgggaaaacattcaccatg 156271
>emb|BX934111.1| Gallus gallus finished cDNA, clone ChEST29c8 Length = 1667 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 149 tctttgcttatggtcagacaagtagtgggaaaacattcaccatg 192 ||||||||||||| |||||| || ||| ||||||| ||||||| Sbjct: 281 tctttgcttatggccagacaggtgctggcaaaacatacaccatg 324
>dbj|AB022211.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1L20 Length = 47665 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 250 gaaagggaattcattatcaagatatctgctatggaaatatacaatgag 297 ||||| ||||||||| | ||| | ||||||||||| || ||||||||| Sbjct: 26229 gaaagagaattcattcttaagttctctgctatggagatctacaatgag 26182
>dbj|AB001436.1| Mus musculus mRNA for motor domain of KIF8, partial cds Length = 555 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 atctttgcttatggtcagac 167 |||||||||||||||||||| Sbjct: 1 atctttgcttatggtcagac 20 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,246,587 Number of Sequences: 3902068 Number of extensions: 4246587 Number of successful extensions: 78959 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78712 Number of HSP's gapped (non-prelim): 242 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)