ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1TRAF2_HUMAN (Q12933) TNF receptor-associated factor 2 (Tumor nec... 50 4e-06
2RNF41_MOUSE (Q8BH75) RING finger protein 41 49 1e-05
3RNF41_HUMAN (Q9H4P4) RING finger protein 41 49 1e-05
4TRAF2_MOUSE (P39429) TNF receptor-associated factor 2 48 1e-05
5RNF41_XENLA (Q5FWL3) RING finger protein 41 48 1e-05
6RNF41_BRARE (Q7ZW16) RING finger protein 41 48 2e-05
7TRAF4_MOUSE (Q61382) TNF receptor-associated factor 4 (Cysteine-... 45 1e-04
8TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-... 44 3e-04
9TRAF6_MOUSE (P70196) TNF receptor-associated factor 6 43 4e-04
10PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4... 41 0.002
11TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleuk... 40 0.004
12SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ... 37 0.022
13UB7I3_MOUSE (Q9WUB0) Ubiquitin-conjugating enzyme 7-interacting ... 37 0.029
14UB7I3_HUMAN (Q9BYM8) Ubiquitin-conjugating enzyme 7-interacting ... 37 0.029
15TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite mot... 37 0.029
16TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite mot... 37 0.029
17SIAH2_BRARE (Q7SYL3) Ubiquitin ligase Siah2 (EC 6.3.2.-) (Seven ... 37 0.029
18UB7I3_RAT (Q62921) Ubiquitin-conjugating enzyme 7-interacting pr... 37 0.037
19RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 ... 37 0.037
20YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B... 36 0.049
21HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex su... 36 0.049
22RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 ... 36 0.064
23TRI50_HUMAN (Q86XT4) Tripartite motif protein 50 36 0.064
24A33_PLEWA (Q02084) Zinc-binding protein A33 35 0.084
25COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Co... 35 0.084
26TRI50_MOUSE (Q810I2) Tripartite motif protein 50 35 0.11
27TRI50_PIG (Q865W2) Tripartite motif protein 50 35 0.11
28TRI50_RAT (Q810I1) Tripartite motif protein 50 35 0.14
29SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in... 35 0.14
30ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (E... 35 0.14
31DG17_DICDI (P11467) Protein DG17 34 0.19
32DPO3_STAAS (Q6G9U9) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.19
33DPO3_STAAR (Q6GHH1) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.19
34DPO3_STAAN (P63982) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.19
35DPO3_STAAM (P63981) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.19
36DPO3_STAAC (Q5HGG7) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.19
37DPO3_STAAW (P68852) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.19
38DPO3_STAAU (P68851) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.19
39RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RA... 34 0.24
40LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A ... 33 0.32
41SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in... 33 0.41
42SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ... 33 0.41
43SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ... 33 0.41
44RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RA... 33 0.41
45PEX12_HUMAN (O00623) Peroxisome assembly protein 12 (Peroxin-12)... 33 0.41
46BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) ... 33 0.41
47SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.... 33 0.41
48BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) ... 33 0.41
49PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING ... 33 0.54
50CI079_HUMAN (Q6ZUB1) Protein C9orf79 33 0.54
51BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein h... 32 0.71
52PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING fi... 32 0.71
53DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3) 32 0.92
54DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3) 32 0.92
55RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein li... 32 0.92
56PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING ... 32 0.92
57TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 rece... 32 0.92
58TRI49_HUMAN (Q9NS80) Tripartite motif protein 49 (RING finger pr... 32 0.92
59TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger pr... 32 1.2
60RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-) 32 1.2
61TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulator... 32 1.2
62TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein 32 1.2
63PEX12_RAT (O88177) Peroxisome assembly protein 12 (Peroxin-12) (... 32 1.2
64PEX12_MOUSE (Q8VC48) Peroxisome assembly protein 12 (Peroxin-12) 32 1.2
65PEX12_CRILO (Q9ET67) Peroxisome assembly protein 12 (Peroxin-12) 32 1.2
66LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor 32 1.2
67CWF11_SCHPO (O94508) Cell cycle control protein cwf11 31 1.6
68MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding pro... 31 1.6
69TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 rece... 31 1.6
70PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3... 31 1.6
71TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger pr... 31 1.6
72TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger pr... 31 1.6
73MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding pro... 31 1.6
74BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein... 31 2.1
75BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein... 31 2.1
76BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein... 31 2.1
77BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein... 31 2.1
78BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein... 31 2.1
79TRAF5_MOUSE (P70191) TNF receptor-associated factor 5 31 2.1
80BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein... 31 2.1
81BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein... 31 2.1
82SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven... 30 2.7
83SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated ... 30 2.7
84ITB7_MOUSE (P26011) Integrin beta-7 precursor (Integrin beta-P) ... 30 2.7
85RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RA... 30 3.5
86PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-b... 30 3.5
87TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein... 30 3.5
88PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-b... 30 3.5
89TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-inte... 30 3.5
90TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger prot... 30 3.5
91SIAH1_RAT (Q920M9) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in... 30 3.5
92SIAH1_HUMAN (Q8IUQ4) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven ... 30 3.5
93SIA1A_MOUSE (P61092) Ubiquitin ligase SIAH1A (EC 6.3.2.-) (Seven... 30 3.5
94RX2_ORYLA (Q9I9A2) Retinal homeobox protein Rx2 30 3.5
95RS7_COREF (Q8FS86) 30S ribosomal protein S7 30 4.6
96PJA1_MOUSE (O55176) Ubiquitin protein ligase Praja1 (EC 6.3.2.-) 30 4.6
97PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polyc... 30 4.6
98PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polyc... 30 4.6
99BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein... 30 4.6
100ZN313_BOVIN (Q4U5R4) Zinc finger protein 313 30 4.6
101G6PD_DROYA (Q27638) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.... 30 4.6
102ZN313_PIG (Q6J1I8) Zinc finger protein 313 30 4.6
103ZN313_PANTR (Q6J212) Zinc finger protein 313 30 4.6
104ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protei... 30 4.6
105PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polyc... 30 4.6
106SIA1B_MOUSE (Q06985) Ubiquitin ligase SIAH1B (EC 6.3.2.-) (Seven... 30 4.6
107RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-) 30 4.6
108RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cel... 30 4.6
109TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor 30 4.6
110DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (P... 29 6.0
111RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD1... 29 6.0
112DPO3_THETN (Q8RA32) DNA polymerase III polC-type (EC 2.7.7.7) (P... 29 6.0
113DNAJ_METSS (Q9ZFC5) Chaperone protein dnaJ 29 6.0
114GLMS_BUCAI (P57138) Glucosamine--fructose-6-phosphate aminotrans... 29 6.0
115PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3... 29 6.0
116RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RA... 29 6.0
117PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (... 29 6.0
118Y411_BUCBP (Q89AA9) Hypothetical transport protein bbp_411 29 6.0
119TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12 29 6.0
120FORD1_AQUAE (O67251) Ferredoxin oxidoreductase 1 subunit forD (E... 29 6.0
121PJA1_HUMAN (Q8NG27) Ubiquitin protein ligase Praja1 (EC 6.3.2.-)... 29 7.8
122RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-) 29 7.8
123TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger prot... 29 7.8
124TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger pr... 29 7.8
125LNX1_HUMAN (Q8TBB1) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-bind... 29 7.8
126ZN313_MOUSE (Q9ET26) Zinc finger protein 313 29 7.8
127SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dep... 29 7.8
128RNF5_CAEEL (Q09463) RING finger protein 5 29 7.8
129DPO3_CLOPE (Q8XJR3) DNA polymerase III polC-type (EC 2.7.7.7) (P... 29 7.8
130TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger pro... 29 7.8 
>TRAF2_HUMAN (Q12933) TNF receptor-associated factor 2 (Tumor necrosis factor|
           type 2 receptor-associated protein 3)
          Length = 501

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
 Frame = +3

Query: 126 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAAT----TQACPYDGYLVTEADSK 293
           L  +Y C  CR ++      QAQC H YC  CLA + ++      AC ++G      +  
Sbjct: 28  LEAKYLCSACRNVL--RRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIY---EEGI 82

Query: 294 PLVDSNKSLAETIGKVTVQCL---YNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRC 458
            +++S+ +  +   +  V+ L       GC W+G L E      +C  G  P++   C
Sbjct: 83  SILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYE----SCHEGRCPLMLTEC 136
to top
>RNF41_MOUSE (Q8BH75) RING finger protein 41|
          Length = 317

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQA-QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSN 311
           +  CP+C  ++   E +QA  C H +C  C+    +  Q CP D  +VT A  +P+    
Sbjct: 15  DLICPICSGVL--EEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPV---P 69

Query: 312 KSLAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYG-NSPVVCNR-CGTQI 470
           + +   + K+ + C     GC     L    +H + C +    PV C + CG ++
Sbjct: 70  RIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEM 124
to top
>RNF41_HUMAN (Q9H4P4) RING finger protein 41|
          Length = 317

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQA-QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSN 311
           +  CP+C  ++   E +QA  C H +C  C+    +  Q CP D  +VT A  +P+    
Sbjct: 15  DLICPICSGVL--EEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPV---P 69

Query: 312 KSLAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYG-NSPVVCNR-CGTQI 470
           + +   + K+ + C     GC     L    +H + C +    PV C + CG ++
Sbjct: 70  RIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEM 124
to top
>TRAF2_MOUSE (P39429) TNF receptor-associated factor 2|
          Length = 501

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
 Frame = +3

Query: 126 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAAT----TQACPYDGYLVTEADSK 293
           L  +Y C  C+ ++      QAQC H YC  CL  + ++      AC Y+G L  E  S 
Sbjct: 28  LEAKYLCSACKNIL--RRPFQAQCGHRYCSFCLTSILSSGPQNCAACVYEG-LYEEGIS- 83

Query: 294 PLVDSNKSLAETIGKVTVQCL---YNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRC 458
            +++S+ +  +   +  V+ L       GC W+G L E      +C  G  P +   C
Sbjct: 84  -ILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYE----SCHEGLCPFLLTEC 136
to top
>RNF41_XENLA (Q5FWL3) RING finger protein 41|
          Length = 317

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQA-QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSN 311
           +  CP+C  ++   E +QA  C H +C  C+    +  Q CP D  +VT A  +P+    
Sbjct: 15  DLICPICSGVL--EEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPV---P 69

Query: 312 KSLAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYG-NSPVVCNR-CGTQI 470
           + +   + K+ + C     GC     L    +H + C +    PV C + CG ++
Sbjct: 70  RIMRNMLSKLQITCDNAVFGCTTIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEM 124
to top
>RNF41_BRARE (Q7ZW16) RING finger protein 41|
          Length = 318

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQA-QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSN 311
           +  CP+C  ++   E ++A  C H +C  C+    A  Q CP D  +VT A  +P+    
Sbjct: 15  DLLCPICSGVL--EEPVRAPHCEHAFCNACITQWFAQQQICPVDRTVVTLAHLRPV---P 69

Query: 312 KSLAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYG-NSPVVCNR-CGTQI 470
           + +   + K+ + C     GC     L +  +H   C +    PV C   CG ++
Sbjct: 70  RIMRNMLSKLQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVTCEEGCGLEM 124
to top
>TRAF4_MOUSE (Q61382) TNF receptor-associated factor 4 (Cysteine-rich motif|
           associated to RING and Traf domains protein 1)
          Length = 470

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLA-YVAATTQACPYDGYLVTEADSKPLVDSNKSL 320
           CP+C   +  +  +   C H YC  CL  +++     CP D   +  A   P    +  L
Sbjct: 18  CPLCGKPMRDSVEVST-CGHRYCDNCLQEFLSEGVFKCPEDQLPLDYAKIYP----DPEL 72

Query: 321 AETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRCGTQI 470
              +  + ++C++++ GC+W G L     H   C++   P   NRC  ++
Sbjct: 73  EVQVLGLAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCP-NRCPAKL 121
to top
>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain|
           associated with RING and Traf domains protein 1)
           (Malignant 62) (RING finger protein 83)
          Length = 470

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQ-CTHLYCKPCLA-YVAATTQACPYDGYLVTEADSKPLVDSNKS 317
           CP+C   +   E +Q   C H +C  CL  +++     CP D   +  A   P    +  
Sbjct: 18  CPLCGKPM--REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYP----DPE 71

Query: 318 LAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRC 458
           L   +  + ++C++++ GC+W G L     H   C++   P   NRC
Sbjct: 72  LEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCP-NRC 117
to top
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6|
          Length = 530

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
 Frame = +3

Query: 126 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEADSKPLV 302
           L  +Y CP+C  L+   EA+Q  C H +CK C +  +      CP D  ++ E     L 
Sbjct: 64  LESKYECPIC--LMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE---NQLF 118

Query: 303 DSNKSLAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRC 458
             N +  E +  +TV+C     GC  +  L     H   C +  + V C +C
Sbjct: 119 PDNFAKREIL-SLTVKC--PNKGCLQKMELRHLEDHQVHCEF--ALVNCPQC 165
to top
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of|
           Numb-protein X 4) (SEMACAP3-like protein)
          Length = 1036

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/106 (26%), Positives = 43/106 (40%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLA 323
           C +C  ++   E L   C H++C  CL   A   + CP     +   +   ++     L 
Sbjct: 18  CKLCGQVL--EEPLCTPCGHVFCASCLLPWAVRRRRCPLQCQPLAPGELYRVLP----LR 71

Query: 324 ETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRCG 461
             I K+ VQC Y   GC     L E   H   C +G +  + +R G
Sbjct: 72  SLIQKLRVQCDYRARGCGHSVRLHELEAHVEHCDFGPARRLRSRGG 117
to top
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal|
           transducer) (RING finger protein 85)
          Length = 522

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
 Frame = +3

Query: 126 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEADSKPLV 302
           L  +Y CP+C  L+   EA+Q  C H +CK C +  +      CP D  ++ E     L 
Sbjct: 64  LESKYECPIC--LMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE---NQLF 118

Query: 303 DSNKSLAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
             N +  E +  + V+C     GC  +  L     H   C +
Sbjct: 119 PDNFAKREIL-SLMVKC--PNEGCLHKMELRHLEDHQAHCEF 157
to top
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Xsiah-2)
          Length = 313

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 28/103 (27%), Positives = 39/103 (37%)
 Frame = +3

Query: 120 QTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPL 299
           Q L   + CPVC   + P   LQ Q  HL C  C   ++     CP        A   P 
Sbjct: 61  QELTSLFECPVCFDYVLP-PILQCQAGHLVCNQCRQKLSC----CP-----TCRASLTPS 110

Query: 300 VDSNKSLAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
           +  N ++ +    V   C Y  +GC    + +E   H   C Y
Sbjct: 111 I-RNLAMEKVASAVLFPCKYASTGCSLSLHHTEKPEHEDICEY 152
to top
>UB7I3_MOUSE (Q9WUB0) Ubiquitin-conjugating enzyme 7-interacting protein 3|
           (UbcM4-interacting protein 28)
          Length = 498

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = +3

Query: 111 LNIQTLPGEYFCPVCRTLIYPNEA-LQAQCTHLYCKPCLAYVAATTQ----ACPY 260
           L + T P E  CPVC +++ P EA +  +C H +C+ CL      +Q    ACP+
Sbjct: 261 LVLNTEPTE--CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPF 313
to top
>UB7I3_HUMAN (Q9BYM8) Ubiquitin-conjugating enzyme 7-interacting protein 3|
           (Hepatitis B virus X-associated protein 4)
           (HBV-associated factor 4) (RING finger protein 54)
          Length = 500

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
 Frame = +3

Query: 111 LNIQTLPGEYFCPVCRTLIYPNEA-LQAQCTHLYCKPCLAYVAATTQ----ACPY--DGY 269
           L + T P E  CPVC +++ P EA +  +C H +C+ CL      +Q    +CP+  + Y
Sbjct: 263 LVLNTEPAE--CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTY 320

Query: 270 -------------LVTEADSKPLVDSNKSLAETIGKVTVQC 353
                        L+T  D +  +D   S+AE     +  C
Sbjct: 321 SCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHC 361
to top
>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)|
          Length = 250

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPC---LAYVAATTQACPYDGYLVTEADSKPLVDSNK 314
           CP+C  +    E+L  QC H YCK C   L+Y   T   CP    +V  + S P    N 
Sbjct: 16  CPICLEVF--KESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLP----NV 69

Query: 315 SLAETI 332
           SLA  I
Sbjct: 70  SLAWVI 75
to top
>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)|
          Length = 250

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPC---LAYVAATTQACPYDGYLVTEADSKPLVDSNK 314
           CP+C  +    E+L  QC H YCK C   L+Y   T   CP    +V  + S P    N 
Sbjct: 16  CPICLEVF--KESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLP----NV 69

Query: 315 SLAETI 332
           SLA  I
Sbjct: 70  SLAWVI 75
to top
>SIAH2_BRARE (Q7SYL3) Ubiquitin ligase Siah2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2-like) (Siah-2)
          Length = 331

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 9/122 (7%)
 Frame = +3

Query: 111 LNIQTLPGE-------YFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 269
           L +  LPG+       + CPVC   + P   LQ Q  HL C  C   ++     CP    
Sbjct: 71  LPVAALPGQSPELTALFECPVCFDYVLP-PILQCQAGHLVCNQCRQKLSC----CP---- 121

Query: 270 LVTEADSKPLVDSNKSLA--ETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPV 443
                   PL  S ++LA  +    +   C Y+ +GC    + SE   H   C +   P 
Sbjct: 122 ----TCRGPLTPSIRNLAMEKVASTLPFPCKYSSAGCLLSLHHSEKPEHEEVCEF--RPY 175

Query: 444 VC 449
            C
Sbjct: 176 TC 177
to top
>UB7I3_RAT (Q62921) Ubiquitin-conjugating enzyme 7-interacting protein 3 (RBCC|
           protein interacting with PKC) (Protein kinase C-binding
           protein beta-15)
          Length = 498

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = +3

Query: 111 LNIQTLPGEYFCPVCRTLIYPNEA-LQAQCTHLYCKPCLAYVAATTQ----ACPY 260
           L + T P E  CPVC +++ P EA +  +C H +C+ CL      +Q    +CP+
Sbjct: 261 LVLNTEPAE--CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPF 313
to top
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (hCOP1)
          Length = 731

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +3

Query: 99  NECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVT 278
           N  I + +    ++ CP+C  +I   EA   +C H +C  C+         CP   Y+V 
Sbjct: 121 NGLINSYEDKSNDFVCPICFDMI--EEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVD 178

Query: 279 EAD 287
             D
Sbjct: 179 NID 181
to top
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic|
           region
          Length = 274

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 269
           +Y CP+C     P  AL   C H++C PCL  +  +++ C   G+
Sbjct: 203 DYRCPIC--FEPPETALMTLCGHVFCCPCLFQMVNSSRTCRQFGH 245
to top
>HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex subunit 3 (EC|
            3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex
            subunit p200) (Helicase, ATP binding 1)
          Length = 2202

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
 Frame = +3

Query: 111  LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ----ACPYDGYLVT 278
            ++IQ  PG+++CP   ++  P  A QA  +H   KP L +V++  Q    A     +L T
Sbjct: 1524 VHIQGFPGQHYCPRMASMNKP--AFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLAT 1581

Query: 279  EADSKPLVDSNKSLAETI 332
            E D K  ++ ++   E I
Sbjct: 1582 EEDPKQWLNMDEREMENI 1599
to top
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (mCOP1)
          Length = 733

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEAD 287
           ++ CP+C  +I   EA   +C H +C  C+         CP   Y+V   D
Sbjct: 135 DFVCPICFDMI--EEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNID 183
to top
>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50|
          Length = 487

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQA---CPYDGYLVTEADSKPLVDSNK 314
           CP+C  +    E L  QC H YCK CL  ++    A   CP     V  + S P    N 
Sbjct: 16  CPICLEVF--KEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGSSSLP----NV 69

Query: 315 SLAETI 332
           SLA  I
Sbjct: 70  SLARVI 75
to top
>A33_PLEWA (Q02084) Zinc-binding protein A33|
          Length = 624

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL--AYVAATTQACPYDGYLVTEADSKPLVDSNKS 317
           CP+CR+L    E +  +C H +CK C+  ++ +A+  +CP    ++TE        +N+ 
Sbjct: 162 CPLCRSLF--KEPVILECGHNFCKHCIDKSWESASAFSCPECKEVLTERK----YTTNRV 215

Query: 318 LAETIGKVTV 347
           LA  + K  V
Sbjct: 216 LANLVKKAAV 225
to top
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 672

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +3

Query: 126 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVD 305
           L  ++ CP+C  +I   +A    C H +C  C+         CP  G+ +T ++  P   
Sbjct: 41  LDKDFLCPICMQII--KDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFL 98

Query: 306 SNKSLAET 329
            +K L +T
Sbjct: 99  LDKLLKKT 106
to top
>TRI50_MOUSE (Q810I2) Tripartite motif protein 50|
          Length = 483

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +3

Query: 111 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAA---TTQACPYDGYLVTE 281
           L +  L  +  CP+C  +    E L  QC H YCK CL  ++    +   CP     V  
Sbjct: 5   LTVPELQDQLQCPICLEVF--KEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDC 62

Query: 282 ADSKPLVDSNKSLAETI 332
           + S P    N SLA  I
Sbjct: 63  SSSPP----NVSLARVI 75
to top
>TRI50_PIG (Q865W2) Tripartite motif protein 50|
          Length = 486

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +3

Query: 111 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQA---CPYDGYLVTE 281
           +++  L     CPVC  +    E L  QC H YCK CL  ++    +   CP     V  
Sbjct: 5   VSVPELEDRLQCPVCLEVF--KEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDS 62

Query: 282 ADSKPLVDSNKSLAETI 332
           + S P    N SLA  I
Sbjct: 63  SSSPP----NVSLARVI 75
to top
>TRI50_RAT (Q810I1) Tripartite motif protein 50|
          Length = 483

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +3

Query: 111 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQA---CPYDGYLVTE 281
           L +  L  +  CP+C  +    E L  QC H YCK CL  ++    +   CP     V  
Sbjct: 5   LTVPELQDQLQCPICLEVF--KEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDC 62

Query: 282 ADSKPLVDSNKSLAETI 332
           + S P    N SLA  I
Sbjct: 63  SSSPP----NVSLARVI 75
to top
>SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia|
           homolog) (SmSINA)
          Length = 371

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLA 323
           CPVC     P   +Q Q  H+ C  C + +++    CP           +  +D+ ++LA
Sbjct: 126 CPVCMDYALP-PIMQCQSGHIVCASCRSKLSS----CP---------TCRGNLDNIRNLA 171

Query: 324 --ETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
             +    V   C Y+ SGC    + +  + H  AC Y
Sbjct: 172 MEKLASSVLFPCKYSTSGCPETFHYTSKSEHEAACEY 208
to top
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein|
           0) (EP0)
          Length = 410

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 21/62 (33%), Positives = 27/62 (43%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLA 323
           CP+C   +   EA    C H +C  C+     T+ ACP     VT       VDS+ S  
Sbjct: 46  CPICLD-VAATEAQTLPCMHKFCLDCIQRWTLTSTACPLCNARVTSILHH--VDSDASFV 102

Query: 324 ET 329
           ET
Sbjct: 103 ET 104
to top
>DG17_DICDI (P11467) Protein DG17|
          Length = 458

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +3

Query: 99  NECILNIQTLP--GEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQAC 254
           N+ + N ++L    +Y CP+C   IY  +  Q +  H  CK C      T + C
Sbjct: 10  NDILFNQESLQKKNKYTCPICFEFIYKKQIYQCKSGHHACKECWEKSLETKKEC 63
to top
>DPO3_STAAS (Q6G9U9) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 279  EADSKPLVDSNKS 317
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
to top
>DPO3_STAAR (Q6GHH1) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 279  EADSKPLVDSNKS 317
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
to top
>DPO3_STAAN (P63982) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 279  EADSKPLVDSNKS 317
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
to top
>DPO3_STAAM (P63981) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 279  EADSKPLVDSNKS 317
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
to top
>DPO3_STAAC (Q5HGG7) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 279  EADSKPLVDSNKS 317
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
to top
>DPO3_STAAW (P68852) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1436

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 897  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 956

Query: 279  EADSKPLVDSNKS 317
            + D  P +D N S
Sbjct: 957  KGDKVPDIDLNFS 969
to top
>DPO3_STAAU (P68851) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1436

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 897  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 956

Query: 279  EADSKPLVDSNKS 317
            + D  P +D N S
Sbjct: 957  KGDKVPDIDLNFS 969
to top
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1073

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLA-YVAATTQACP 257
           C VC  L+  +E +Q+ C HL+C+ C+A Y+ +    CP
Sbjct: 310 CQVCDHLL--SEPVQSPCRHLFCRSCIAKYIYSLGPHCP 346
to top
>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)|
          Length = 3075

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +3

Query: 372 CQWQGNLSECNTHGT--ACAYGNSPVVCNRC 458
           C+  G+ +ECN HG   ACA+  + V C +C
Sbjct: 742 CECHGHAAECNVHGVCIACAHNTTGVHCEQC 772
to top
>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2)
          Length = 325

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 25/95 (26%), Positives = 36/95 (37%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLA 323
           CPVC   + P   LQ Q  HL C  C   ++     CP     +T +        N ++ 
Sbjct: 81  CPVCFDYVLP-PILQCQAGHLVCNQCRQKLSC----CPTCRGALTPSIR------NLAME 129

Query: 324 ETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
           +    V   C Y  +GC    + +E   H   C Y
Sbjct: 130 KVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEY 164
to top
>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2) (mSiah2)
          Length = 325

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 25/95 (26%), Positives = 36/95 (37%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLA 323
           CPVC   + P   LQ Q  HL C  C   ++     CP     +T +        N ++ 
Sbjct: 81  CPVCFDYVLP-PILQCQAGHLVCNQCRQKLSC----CPTCRGALTPSIR------NLAME 129

Query: 324 ETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
           +    V   C Y  +GC    + +E   H   C Y
Sbjct: 130 KVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEY 164
to top
>SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2) (hSiah2)
          Length = 324

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 25/95 (26%), Positives = 36/95 (37%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLA 323
           CPVC   + P   LQ Q  HL C  C   ++     CP     +T +        N ++ 
Sbjct: 80  CPVCFDYVLP-PILQCQAGHLVCNQCRQKLSC----CPTCRGALTPSIR------NLAME 128

Query: 324 ETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
           +    V   C Y  +GC    + +E   H   C Y
Sbjct: 129 KVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEY 163
to top
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1045

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEADSKPLVDSNKSL 320
           C VC  ++  ++ +Q  C HL+C+ C L Y+      CP   Y     D   L    KS 
Sbjct: 294 CLVCEHIL--SDPVQTSCKHLFCRICILKYIKLMGCYCPSCKYPCFPTD---LTVPVKSY 348

Query: 321 AETIGKVTVQCLYNKSGCQWQGNLSECNTH 410
              +  + ++C    SGC  + +L + + H
Sbjct: 349 LNVLNALLLKC--TVSGCDEEISLGKYSHH 376
to top
>PEX12_HUMAN (O00623) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome|
           assembly factor 3) (PAF-3)
          Length = 359

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 269
           CP+CR     N+ + A   +++C  C+ +   + QACP  GY
Sbjct: 304 CPLCRKTRV-NDTVLATSGYVFCYRCVFHYVRSHQACPITGY 344
to top
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger|
           protein rfp-1)
          Length = 828

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ-ACP 257
           CP C+T   P + +  +C HL+C+ C+  +  T Q  CP
Sbjct: 776 CPSCKTR--PKDCIMLKCYHLFCETCIKTMYDTRQRKCP 812
to top
>SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.-) (Seven in|
           absentia homolog 1)
          Length = 305

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 31/106 (29%), Positives = 39/106 (36%), Gaps = 8/106 (7%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYD-GYLVTEADSKPLVDSNKSL 320
           CPVC  L+YP    Q    H  C  C   V  T   C Y+ G +   A  K        +
Sbjct: 57  CPVCTNLMYP-PIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK--------V 107

Query: 321 AETIGKVTVQCLYNKSGCQ----WQGNL---SECNTHGTACAYGNS 437
           AE++    V C Y   GCQ    +   L     C     +C Y  S
Sbjct: 108 AESL---EVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGS 150
to top
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger|
           protein rfp-1)
          Length = 837

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ-ACP 257
           CP C+T   P + +  +C HL+C+ C+  +  T Q  CP
Sbjct: 785 CPSCKTR--PKDCIMLKCYHLFCETCIKTMYDTRQRKCP 821
to top
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein|
           134) (Mel18 and Bmi1-like RING finger)
          Length = 352

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 15/84 (17%), Positives = 36/84 (42%)
 Frame = +3

Query: 96  DNECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLV 275
           + E ++N+  L     C +C+  +     +  +C H +CK C+      +  CP    +V
Sbjct: 120 EEERLINLSELTPYILCSICKGYLIDATTI-TECLHTFCKSCIVRHFYYSNRCPKCNIVV 178

Query: 276 TEADSKPLVDSNKSLAETIGKVTV 347
            +      +  ++ L + + K+ +
Sbjct: 179 HQTQPLYNIRLDRQLQDIVYKLVI 202
to top
>CI079_HUMAN (Q6ZUB1) Protein C9orf79|
          Length = 1445

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 291  KPLVDSNKSLAETIGKVTVQCLYNKSGCQWQGNLSECNTH-GTACAYGNSPVVCNR 455
            +  +D     A TI +V  Q L +K G QW    SE N H G   A  N P  C+R
Sbjct: 1306 RQFMDCMADKAWTISRVVGQILVDKLGLQWGRGPSEVNRHKGDFRAQENVPSCCHR 1361
to top
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog|
          Length = 1817

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  QC H++CK C+
Sbjct: 24  CPICLELI--KEPVSTQCDHIFCKFCM 48
to top
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein|
           134)
          Length = 351

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 16/84 (19%), Positives = 36/84 (42%)
 Frame = +3

Query: 96  DNECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLV 275
           + E ++N+  L     C +C+  +     +  +C H +CK C+      +  CP    +V
Sbjct: 119 EEERLINLVELTPYILCSICKGYLIDATTI-TECLHTFCKSCIVRHFYYSNRCPKCNIVV 177

Query: 276 TEADSKPLVDSNKSLAETIGKVTV 347
            +      +  ++ L + + K+ V
Sbjct: 178 HQTQPLYNIRLDRQLQDIVYKLVV 201
to top
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)|
          Length = 347

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDG 266
           E  CP+C   I   + L+ +C H +C+ C+       +ACP  G
Sbjct: 161 ETTCPICLGEIQNAKTLE-KCRHSFCEGCITRALQVKKACPMCG 203
to top
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)|
          Length = 347

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDG 266
           E  CP+C   I   + L+ +C H +C+ C+       +ACP  G
Sbjct: 161 ESTCPICLGEIQNAKTLE-KCRHSFCEGCITRALQVKKACPMCG 203
to top
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 378

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACP 257
           C +C+ L+  N  ++ QC H YC  C+         CP
Sbjct: 29  CYICKDLL--NAPVRTQCDHTYCSQCIREFLLRDNRCP 64
to top
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein|
           134) (Mel18 and Bmi1-like RING finger)
          Length = 353

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/84 (17%), Positives = 36/84 (42%)
 Frame = +3

Query: 96  DNECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLV 275
           + E ++N+  L     C +C+  +     +  +C H +CK C+      +  CP    +V
Sbjct: 121 EEERLINLVELTPYILCSICKGYLIDATTI-TECLHTFCKSCIVRHFYYSNRCPKCNIVV 179

Query: 276 TEADSKPLVDSNKSLAETIGKVTV 347
            +      +  ++ L + + K+ +
Sbjct: 180 HQTQPLYNIRLDRQLQDIVYKLVI 203
to top
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated|
           factor 1) (CRAF1) (TRAFAMN)
          Length = 567

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
 Frame = +3

Query: 117 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCL-AYVAATTQACPYDGYLVTEADSK 293
           ++T+  +Y C  CR ++   +  Q +C H +C+ C+ A +++++  C        E+  K
Sbjct: 43  VKTVEDKYKCEKCRLVLCNPK--QTECGHRFCESCMAALLSSSSPKCT----ACQESIIK 96

Query: 294 PLVDSNKSLAETIGKVTVQCLYNKSGCQWQGNLSECNTH-GTACAYGNSPVVCNRCGTQI 470
             V  +      I  + V C     GC  Q  L     H    C +   P +   C  ++
Sbjct: 97  DKVFKDNCCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNECQFEELPCLRADCKEKV 156
to top
>TRI49_HUMAN (Q9NS80) Tripartite motif protein 49 (RING finger protein 18)|
           (Testis-specific ring-finger protein)
          Length = 452

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 117 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPC 221
           +Q   GE  CP+C    Y  + +   C H +C+PC
Sbjct: 6   LQVFQGELICPLCMN--YFIDPVTIDCGHSFCRPC 38
to top
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)|
          Length = 258

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           E  CP+C+  +   EA+   C HL+C+ CL
Sbjct: 11  EGVCPICQESL--KEAVSTNCGHLFCRVCL 38
to top
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)|
          Length = 1114

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
 Frame = +3

Query: 144  CPVCRT-LIYPNEALQ-AQCTHLYCKPCLAYVAATTQ------ACPYDGYLVTEAD 287
            C +C T  I P  A+   +C H +C+PCLA      Q       CPY    ++EA+
Sbjct: 858  CAICTTECIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEAN 913
to top
>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of|
           interleukin 2 receptor)
          Length = 496

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 117 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           ++ +  E  CP+C  L+   E + A C H +C+ C+
Sbjct: 6   LEMIKEEVTCPICLELL--KEPVSADCNHSFCRACI 39
to top
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein|
          Length = 229

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           E  CP+C+  +   EA+   C HL+C+ CL
Sbjct: 11  EGVCPICQESL--KEAVSTNCGHLFCRVCL 38
to top
>PEX12_RAT (O88177) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome|
           assembly factor 3) (PAF-3)
          Length = 359

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 269
           CP+CR     N+ + A   +++C  C+     + QACP  GY
Sbjct: 304 CPLCRKARV-NDTVLATSGYVFCYRCVFNYVRSHQACPITGY 344
to top
>PEX12_MOUSE (Q8VC48) Peroxisome assembly protein 12 (Peroxin-12)|
          Length = 359

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 269
           CP+CR     N+ + A   +++C  C+     + QACP  GY
Sbjct: 304 CPLCRKTRV-NDTVLATSGYVFCYRCVFNYVRSHQACPITGY 344
to top
>PEX12_CRILO (Q9ET67) Peroxisome assembly protein 12 (Peroxin-12)|
          Length = 359

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 269
           CP+CR     N+ + A   +++C  C+     + QACP  GY
Sbjct: 304 CPLCRKTRV-NDTVLATSGYVFCYRCVFNYVRSHQACPITGY 344
to top
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 144  CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQAC-PYDGYLVTEA 284
            C +C    Y N  L   CT   C PC       T+AC P+ G+ + +A
Sbjct: 2003 CEICAPGFYGNALLPGNCTRCDCTPC------GTEACDPHSGHCLCKA 2044
to top
>CWF11_SCHPO (O94508) Cell cycle control protein cwf11|
          Length = 1284

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -3

Query: 379  HWQPLLLYRH---CTVTLPIVSASDLFESTRGLE 287
            HW P   Y+    C+  L ++   DLF STRGLE
Sbjct: 1194 HWNPKTFYKAFSACSYGLYVLCNRDLFRSTRGLE 1227
to top
>MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding protein|
          Length = 1187

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +3

Query: 144 CPVCRTLIYPN--EALQAQCTHLYCKPCLAYVAATTQACPYDGYLV-TEADSKPLVDSNK 314
           CP+C      N  + +   C+H  CK CL  +    +ACP+D   + T+ D  P+   N 
Sbjct: 14  CPICYNEFDENVHKPISLGCSHTVCKTCLNKL--HRKACPFDQTAINTDIDVLPV---NF 68

Query: 315 SLAETIG 335
           +L + +G
Sbjct: 69  ALLQLVG 75
to top
>TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 receptor-associated|
           factor 1) (CRAF1) (CD40-binding protein) (CD40BP)
           (LMP1-associated protein) (LAP1) (CAP-1)
          Length = 568

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
 Frame = +3

Query: 117 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCL-AYVAATTQACPYDGYLVTEADSK 293
           ++T+  +Y C  C  ++   +  Q +C H +C+ C+ A +++++  C        E+  K
Sbjct: 44  VKTVEDKYKCEKCHLVLCSPK--QTECGHRFCESCMAALLSSSSPKCT----ACQESIVK 97

Query: 294 PLVDSNKSLAETIGKVTVQCLYNKSGCQWQGNLSECNTH-GTACAYGNSPVVCNRCGTQI 470
             V  +      I  + + C     GC  Q  L     H    C +   P V   C  ++
Sbjct: 98  DKVFKDNCCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFEELPCVRPDCKEKV 157
to top
>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of|
           Numb-protein X 3) (Semaphorin cytoplasmic
           domain-associated protein 3) (SEMACAP3 protein)
          Length = 1066

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACP--YDGYLVTEADSKPLVDSNKS 317
           C +C  ++   + L   C H++C  C+        +CP    G L  +  +  L      
Sbjct: 18  CALCHKVL--EDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHVL-----P 70

Query: 318 LAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRCG 461
           L   I K+ ++C Y   GC     L +   H   C +  +P  C   G
Sbjct: 71  LKRLILKLDIKCAYATRGCGRVVKLQQLPEHLERCDF--APARCRHAG 116
to top
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)|
           (B30-RING finger protein)
          Length = 481

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +3

Query: 114 NIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSK 293
           ++ +L  E  CP+C+  +   E +   C H +C+ CL      T+ C   G  + E+ + 
Sbjct: 6   SVTSLADEVNCPICQGTL--REPVTIDCGHNFCRACL------TRYCEIPGPDLEESPTC 57

Query: 294 PL 299
           PL
Sbjct: 58  PL 59
to top
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)|
           (B30-RING finger protein)
          Length = 481

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +3

Query: 114 NIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSK 293
           ++ +L  E  CP+C+  +   E +   C H +C+ CL      T+ C   G  + E+ + 
Sbjct: 6   SVTSLADEVNCPICQGTL--REPVTIDCGHNFCRACL------TRYCEIPGPDLEESPTC 57

Query: 294 PL 299
           PL
Sbjct: 58  PL 59
to top
>MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding protein (RING|
           finger protein 164)
          Length = 1191

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +3

Query: 144 CPVCRTLIYPN--EALQAQCTHLYCKPCLAYVAATTQACPYDGYLV-TEADSKPLVDSNK 314
           CP+C      N  + +   C+H  CK CL  +    +ACP+D   + T+ D  P+   N 
Sbjct: 14  CPICYNEFDENVHKPISLGCSHTVCKTCLNKL--HRKACPFDQTAINTDIDVLPV---NF 68

Query: 315 SLAETIG 335
           +L + +G
Sbjct: 69  ALLQLVG 75
to top
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
to top
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
to top
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger|
           protein 53)
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
to top
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
to top
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog|
          Length = 1849

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
to top
>TRAF5_MOUSE (P70191) TNF receptor-associated factor 5|
          Length = 558

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +3

Query: 93  FDNECILNIQTLPGEYFCPVCRTLIYPNEALQAQC-------THLYCK 215
           F  +CI +++ L     CPV + +I P E  +  C        H+YCK
Sbjct: 64  FCQQCIRSLRELNSVPICPVDKEVIKPQEVFKDNCCKREVLNLHVYCK 111
to top
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog|
          Length = 1812

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
to top
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog|
          Length = 1878

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
to top
>SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2)
          Length = 308

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYD-GYLVTEADSKPLVDSNKSL 320
           CPVC  L+YP    Q    H  C  C   V  T   C Y+ G +   A  K        +
Sbjct: 60  CPVCTNLMYP-PIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEK--------V 110

Query: 321 AETIGKVTVQCLYNKSGC 374
           AE++    V C Y   GC
Sbjct: 111 AESL---EVPCRYQNLGC 125
to top
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3-like 1 (EC
           3.6.1.-) (SMARCA3-like protein 1)
          Length = 881

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEAD 287
           ++ CP+C  +  P   +  +C H++C+ C L  +  +   CP     +T++D
Sbjct: 632 DFDCPIC--ISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSD 681
to top
>ITB7_MOUSE (P26011) Integrin beta-7 precursor (Integrin beta-P) (M290 IEL|
           antigen)
          Length = 806

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 333 GKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVC 449
           G +  QCL  KS C+   + +EC   GT     N  VVC
Sbjct: 632 GALCDQCLGCKSPCEQYRDCAECGAFGTGPLAANCSVVC 670
to top
>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1057

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACP 257
           C VC  L+  ++ +Q+ C HL+C+ C + Y  A    CP
Sbjct: 296 CQVCDHLL--SDPVQSPCRHLFCRLCIIRYTHALGPNCP 332
to top
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144)
          Length = 344

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 17/77 (22%), Positives = 31/77 (40%)
 Frame = +3

Query: 111 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADS 290
           + I  L     C +C         +  +C H +CK C+     T + CP     V +   
Sbjct: 7   IKITELNPHLMCALCGGYFIDATTI-VECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRP 65

Query: 291 KPLVDSNKSLAETIGKV 341
              + S+K+L + + K+
Sbjct: 66  LLSIRSDKTLQDIVYKL 82
to top
>TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein) (Tripartite|
           motif protein 27) (RING finger protein 76)
          Length = 513

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +3

Query: 120 QTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAY---VAATTQACP 257
           + L  E  CPVC  L Y  E +   C H  C  CLA     A T  +CP
Sbjct: 8   ECLQQETTCPVC--LQYFAEPMMLDCGHNICCACLARCWGTAETNVSCP 54
to top
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144) (Zfp-144)
          Length = 342

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 17/77 (22%), Positives = 31/77 (40%)
 Frame = +3

Query: 111 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADS 290
           + I  L     C +C         +  +C H +CK C+     T + CP     V +   
Sbjct: 7   IKITELNPHLMCALCGGYFIDATTI-VECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRP 65

Query: 291 KPLVDSNKSLAETIGKV 341
              + S+K+L + + K+
Sbjct: 66  LLSIRSDKTLQDIVYKL 82
to top
>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting|
           protein) (RING finger protein 90)
          Length = 511

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
 Frame = +3

Query: 90  GFDNECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCL---------AYVAAT 242
           G   E +     L GE  C +C  L    E +  +C H +C+ C+           V A 
Sbjct: 11  GTGAEALALAAELQGEATCSICLELF--REPVSVECGHSFCRACIGRCWERPGAGSVGAA 68

Query: 243 TQACPY 260
           T+A P+
Sbjct: 69  TRAPPF 74
to top
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)|
          Length = 247

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C   +   EA+   C HL+C+ CL
Sbjct: 12  CPICLDPL--KEAVSTDCRHLFCRMCL 36
to top
>SIAH1_RAT (Q920M9) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia|
           homolog 1) (Siah-1) (Siah-1a)
          Length = 282

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVD-SNKSL 320
           CPVC   + P   LQ Q  HL C  C   +      CP            PL    N ++
Sbjct: 41  CPVCFDYVLP-PILQCQSGHLVCSNCRPKLTC----CP--------TCRGPLGSIRNLAM 87

Query: 321 AETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
            +    V   C Y  SGC+     +E   H   C +
Sbjct: 88  EKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEF 123
to top
>SIAH1_HUMAN (Q8IUQ4) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia|
           homolog 1) (Siah-1) (Siah-1a)
          Length = 282

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVD-SNKSL 320
           CPVC   + P   LQ Q  HL C  C   +      CP            PL    N ++
Sbjct: 41  CPVCFDYVLP-PILQCQSGHLVCSNCRPKLTC----CP--------TCRGPLGSIRNLAM 87

Query: 321 AETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
            +    V   C Y  SGC+     +E   H   C +
Sbjct: 88  EKVANSVLFPCKYASSGCEITLPHTEKADHEELCEF 123
to top
>SIA1A_MOUSE (P61092) Ubiquitin ligase SIAH1A (EC 6.3.2.-) (Seven in absentia|
           homolog 1a) (Siah1a) (Siah-1a) (mSiah-1a)
          Length = 282

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 1/96 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVD-SNKSL 320
           CPVC   + P   LQ Q  HL C  C   +      CP            PL    N ++
Sbjct: 41  CPVCFDYVLP-PILQCQSGHLVCSNCRPKLTC----CP--------TCRGPLGSIRNLAM 87

Query: 321 AETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAY 428
            +    V   C Y  SGC+     +E   H   C +
Sbjct: 88  EKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEF 123
to top
>RX2_ORYLA (Q9I9A2) Retinal homeobox protein Rx2|
          Length = 327

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = -1

Query: 303 PPEAWNQLPSL---SNHHKGRLVWLLLHKPSKVCSRDVCTELAELRWGI*VSDKQGKNIH 133
           P E +  LP L   S HH         +  S + S D C E++ L   + ++D   K+I 
Sbjct: 77  PSEPYGNLPELGDSSQHHS--------YHDSSLFSSDKCEEMSNLTKEVDIADGSPKSIK 128

Query: 132 QEEFVYSEYIHYRN 91
           +EE  + +  H RN
Sbjct: 129 EEE--HGKKKHRRN 140
to top
>RS7_COREF (Q8FS86) 30S ribosomal protein S7|
          Length = 155

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 258 YDGYLVTEADSKPLVDSNKSLAETIGKVTVQCLYNKSGCQWQGNLSE 398
           YD  LVT+  +K L+D  KS AE I    ++    K+G +  G L +
Sbjct: 17  YDSELVTQLVNKILLDGKKSTAERIVYGALEICREKTGLEPVGTLEK 63
to top
>PJA1_MOUSE (O55176) Ubiquitin protein ligase Praja1 (EC 6.3.2.-)|
          Length = 605

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 123 TLPGEYFCPVCRTLIYPNE-ALQAQCTHLYCKPCLAYVAATTQACP 257
           T+  E  CP+C +     E A +  C H + KPC++     +  CP
Sbjct: 524 TVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCP 569
to top
>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex|
           protein BMI-1) (RING finger protein 51)
          Length = 326

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 192 QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETIGKV 341
           +C H +CK C+     T++ CP     V +      + S+K+L + + K+
Sbjct: 33  ECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKL 82
to top
>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex|
           protein BMI-1)
          Length = 326

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 192 QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETIGKV 341
           +C H +CK C+     T++ CP     V +      + S+K+L + + K+
Sbjct: 33  ECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKL 82
to top
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCL 224
           CP+C  LI   E +  +C H++C+ C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCRFCM 48
to top
>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313|
          Length = 230

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 132 GEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           G + CPVC  +    + +Q  C H++C  CL
Sbjct: 27  GRFTCPVCLEVY--EKPVQVPCGHVFCSACL 55
to top
>G6PD_DROYA (Q27638) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
           (Fragment)
          Length = 518

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 277 RKLIPSLWWIQINHLLRQLVKLQYNACTTRVVANGKETCL 396
           +K+ P LWW   + LL +L K    A +   V + KE CL
Sbjct: 44  KKIYPKLWWFYRDDLLPKLTKFCGYARSMLTVDSIKEQCL 83
to top
>ZN313_PIG (Q6J1I8) Zinc finger protein 313|
          Length = 228

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 132 GEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           G + CPVC  +    + +Q  C H++C  CL
Sbjct: 25  GRFTCPVCLEVY--EKPVQVPCGHVFCSACL 53
to top
>ZN313_PANTR (Q6J212) Zinc finger protein 313|
          Length = 228

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 132 GEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           G + CPVC  +    + +Q  C H++C  CL
Sbjct: 25  GRFTCPVCLEVY--EKPVQVPCGHVFCSACL 53
to top
>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)|
          Length = 228

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 132 GEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           G + CPVC  +    + +Q  C H++C  CL
Sbjct: 25  GRFTCPVCLEVY--EKPVQVPCGHVFCSACL 53
to top
>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex|
           protein BMI-1)
          Length = 324

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 192 QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETIGKV 341
           +C H +CK C+     T++ CP     V +      + S+K+L + + K+
Sbjct: 33  ECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKL 82
to top
>SIA1B_MOUSE (Q06985) Ubiquitin ligase SIAH1B (EC 6.3.2.-) (Seven in absentia|
           homolog 1b) (Siah1b) (Siah-1b)
          Length = 282

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVD-SNKSL 320
           CPVC   + P   LQ Q  HL C  C   +      CP            PL    N ++
Sbjct: 41  CPVCFDYVLP-PILQCQSGHLVCSNCRPKLTC----CP--------TCRGPLGSIRNLAV 87

Query: 321 AETIGKVTVQCLYNKSGCQ 377
            +    V   C Y+ SGC+
Sbjct: 88  EKVANSVLFPCKYSASGCE 106
to top
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)|
          Length = 231

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ-ACPY-DGYLVTE 281
           C VC  +++  + ++ +C H++C+ C+A      +  CPY   YL +E
Sbjct: 36  CAVCLEVLH--QPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYLPSE 81
to top
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING|
           activation protein 1) (TRAC-1)
          Length = 231

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ-ACPY-DGYLVTE 281
           C VC  +++  + ++ +C H++C+ C+A      +  CPY   YL +E
Sbjct: 36  CAVCLEVLH--QPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYLPSE 81
to top
>TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor|
          Length = 667

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 31/123 (25%), Positives = 39/123 (31%), Gaps = 1/123 (0%)
 Frame = +3

Query: 102 EC-ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVT 278
           EC + N +T   +  C  C    Y N    + C H  CK C A  A+    CP       
Sbjct: 341 ECTVANCKTCNDQGQCQTCNDGFYKNGDACSPC-HESCKTCSAGTASDCTECP------- 392

Query: 279 EADSKPLVDSNKSLAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRC 458
               K L   N     T G+          GC        C T G      +    C+ C
Sbjct: 393 --TGKALKYGNDGTKGTCGE----------GCTTGQGSGACKTCGLTI---DGASYCSEC 437

Query: 459 GTQ 467
            TQ
Sbjct: 438 DTQ 440
to top
>DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1427

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+   +  +   +    L    C  C   ++      P++ +L  
Sbjct: 888  ITEVNGLPPHYVCPGCKYNEFITDGSVSSGADLPDKNCPNCGVLLSKDGHDIPFETFLGF 947

Query: 279  EADSKPLVDSNKS 317
            E D +P +D N S
Sbjct: 948  EGDKEPDIDLNFS 960
to top
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)|
           (RING finger protein 73)
          Length = 495

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 192 QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETI 332
           QC+H YC  C+    +    CP     VTE D K    +N+ L E +
Sbjct: 40  QCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLK----NNRILDELV 82
to top
>DPO3_THETN (Q8RA32) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1401

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRTLIYPNEA---LQAQCTHLYCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+   +  +            YC  C   +       P++ ++  
Sbjct: 864  ITEVNPLPPHYVCPKCKHSEFVTDGSFGCGVDMPDKYCPNCGTLMKKDGFDIPFEVFMGF 923

Query: 279  EADSKPLVDSNKS 317
            E D +P +D N S
Sbjct: 924  EGDKEPDIDLNFS 936
to top
>DNAJ_METSS (Q9ZFC5) Chaperone protein dnaJ|
          Length = 371

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +3

Query: 390 LSECNT-HGTACAYGNSPVVCNRCG 461
           +SEC T HG+    G  PV C  CG
Sbjct: 142 MSECETCHGSGARPGTQPVTCTTCG 166
to top
>GLMS_BUCAI (P57138) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 608

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
 Frame = +3

Query: 255 PYDGYLVTEADSKPLVDSNKSLAETIGKV-----TVQCLYNKSGCQWQGNLSECNTHGTA 419
           P D  + +E  S+ LV   KSL  T+ +      T+  L       + GNL+ CN   ++
Sbjct: 323 PCDVEIASEFSSRKLVVRKKSLLITLSQSGETADTLSALRYSKKLGYLGNLTICNMKSSS 382

Query: 420 CAYGNSPVVCNRCGTQIDIVSAR 488
               +   +  + G +I + S +
Sbjct: 383 LVRESDFYILTKAGLEIGVASTK 405
to top
>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin|
           cytoplasmic domain-associated protein 3) (SEMACAP3
           protein)
          Length = 1063

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACP--YDGYLVTEADSKPLVDSNKS 317
           C +C  ++   + L   C H++C  C+        +CP    G L  +  +  L      
Sbjct: 18  CALCHKVL--EDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHVL-----P 70

Query: 318 LAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRCG 461
           L   I K+ ++C +   GC     L +   H   C +  +P  C   G
Sbjct: 71  LKRLILKLDIKCAHAARGCGRVVKLQDLPEHLERCDF--APARCRHAG 116
to top
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1041

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEADSKPLVDSNKSL 320
           C +C  ++   + ++  C HL+C+ C L+ +      CP   Y     D   LV   KS 
Sbjct: 289 CQICEHILA--DPVETTCRHLFCRTCILSCIRVMGCYCPSCWYPCFPTD---LVTPVKSF 343

Query: 321 AETIGKVTVQC 353
              +  ++++C
Sbjct: 344 LNILDSLSIRC 354
to top
>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin|
           cytoplasmic domain-associated protein 3) (SEMACAP3
           protein)
          Length = 1062

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACP--YDGYLVTEADSKPLVDSNKS 317
           C +C  ++   + L   C H++C  C+        +CP    G L  +  +  L      
Sbjct: 18  CALCHKVL--EDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKELNHVL-----P 70

Query: 318 LAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACAYGNSPVVCNRCG 461
           L   I K+ ++C +   GC     L +   H   C +  +P  C   G
Sbjct: 71  LKRLILKLDIKCAHAARGCGRVVKLQDLPEHLERCDF--APARCRHAG 116
to top
>Y411_BUCBP (Q89AA9) Hypothetical transport protein bbp_411|
          Length = 394

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = +1

Query: 97  IMNVF*IYKLFLVN----IFALFVGHSYTPTKL 183
           I+N+F  Y LFL+N    IF LF G  Y P  L
Sbjct: 158 IVNMFGFYCLFLINSLLSIFCLFFGMFYIPASL 190
to top
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12|
          Length = 284

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 117 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           ++ L  E  CPVC  L+   + + A C H +C+ C+
Sbjct: 6   MKNLKEEVTCPVCLNLMV--KPVSADCGHTFCQGCI 39
to top
>FORD1_AQUAE (O67251) Ferredoxin oxidoreductase 1 subunit forD (EC 1.-.-.-)|
           (Ferredoxin oxidoreductase 1 delta subunit)
          Length = 79

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 141 FCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSK 293
           FCP   TL+Y +E   A    L CK C   V   ++    D   +  A+++
Sbjct: 23  FCPEPNTLMYTDEGHHAYVNTLRCKGCALCVYVCSELLKRDSIEMVYAENR 73
to top
>PJA1_HUMAN (Q8NG27) Ubiquitin protein ligase Praja1 (EC 6.3.2.-) (RING finger|
           protein 70)
          Length = 643

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNE-ALQAQCTHLYCKPCLAYVAATTQACP 257
           E  CP+C +     E A +  C H + KPC++     +  CP
Sbjct: 592 EMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCP 633
to top
>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)|
          Length = 232

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ--ACPY-DGYLVTE 281
           C VC  +++  + ++ +C H++C+ C+A          CPY   YL +E
Sbjct: 36  CSVCLEVLH--QPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYLPSE 82
to top
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)|
          Length = 545

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +3

Query: 117 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPC---LAYVAATTQACPYDGYLVTEAD 287
           +++L  E  C +C  L Y  + +   C H++C+ C   +  V+     CP      T+ +
Sbjct: 7   LRSLEEEVTCSIC--LDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKEN 64

Query: 288 SKPLVDSNKSLAETIGKVTV 347
            +P V    SL E I ++ V
Sbjct: 65  IRP-VWQLASLVENIERLKV 83
to top
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50|
           kDa-stimulated trans-acting factor) (Staf-50)
          Length = 498

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           E  CP+C  L+   E L   C H +C+ C+
Sbjct: 12  EVTCPICLELL--TEPLSLDCGHSFCQACI 39
to top
>LNX1_HUMAN (Q8TBB1) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)|
           (Ligand of Numb-protein X 1)
          Length = 728

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY-LVTEADSKPLVDSN 311
           +  C +C   +   + L   C H YC  CL         CP D   LV +   K  +  N
Sbjct: 38  DLICHICLQALL--DPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKPLVLQHCKKSSILVN 95

Query: 312 KSLAETIGKVTVQCLYNK 365
           K L     K+ V C + +
Sbjct: 96  KLL----NKLLVTCPFRE 109
to top
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313|
          Length = 229

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
 Frame = +3

Query: 138 YFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKS 317
           + CPVC  +    + +Q  C H++C  CL       Q C      V       L    ++
Sbjct: 28  FTCPVCLEVF--EKPVQVPCGHVFCSACL-------QECLKPKKPVCGVCRSALAPGVRA 78

Query: 318 --LAETIGKVTVQCLYNKSGCQWQGNLSECNTHGTACA 425
             L   I  +   C     GC+    LS+   H T+C+
Sbjct: 79  VELERQIESIETSC----HGCRKNFILSKIRAHVTSCS 112
to top
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3 (EC 3.6.1.-)
           (Sucrose nonfermenting protein 2-like 3) (TNF-response
           element-binding protein) (P113)
          Length = 1003

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +3

Query: 144 CPVCR-TLIYPNEALQAQCTHLYCKPCLAYVAATTQ---ACP 257
           C +C  +L +P   +   C H++CKPC+  V  + Q    CP
Sbjct: 754 CAICLDSLTFP---VITHCAHVFCKPCICQVIHSEQPHAKCP 792
to top
>RNF5_CAEEL (Q09463) RING finger protein 5|
          Length = 235

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +3

Query: 144 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAAT---TQACPYDGYLVTEADSKPLVDSNK 314
           C +C  L    +A+ + C HL+C PCL+    T    Q CP           K  +D NK
Sbjct: 26  CNIC--LDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPV---------CKSAIDGNK 74
to top
>DPO3_CLOPE (Q8XJR3) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1449

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108  ILNIQTLPGEYFCPVCRT---LIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVT 278
            I  +  LP  Y CP C+     +  + +  A      C  C A         P++ +L  
Sbjct: 911  ITEVNGLPPHYVCPNCKKSEFFLDGSISSGADLPDKNCPDCGAKYIKDGHDIPFETFLGF 970

Query: 279  EADSKPLVDSNKS 317
            E D +P +D N S
Sbjct: 971  EGDKEPDIDLNFS 983
to top
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)|
          Length = 488

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 135 EYFCPVCRTLIYPNEALQAQCTHLYCKPCL 224
           E  CP+C  L+   E L   C H +C+ C+
Sbjct: 12  EVTCPICLELL--TEPLSIDCGHSFCQACI 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,693,318
Number of Sequences: 219361
Number of extensions: 1750713
Number of successful extensions: 5697
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 5378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5684
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top