Clone Name | bastl32h09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2 | 28 | 7.1 | 2 | LAMB2_HUMAN (P55268) Laminin beta-2 chain precursor (S-laminin) ... | 27 | 9.3 |
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>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2| Length = 306 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 365 RQPCRRRPPGTNTWGPG 315 R+P +RR PGT W PG Sbjct: 225 RRPLQRRRPGTGPWRPG 241
>LAMB2_HUMAN (P55268) Laminin beta-2 chain precursor (S-laminin) (Laminin B1s| chain) Length = 1798 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +2 Query: 266 EPTRTAGTGDTHCRMRLQGPRC 331 +P GTG HCR + G RC Sbjct: 531 DPQCDEGTGQCHCRQHMVGRRC 552 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.135 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,479,046 Number of Sequences: 219361 Number of extensions: 449383 Number of successful extensions: 461 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 449 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 461 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)