Clone Name | bastl32h04 |
---|---|
Clone Library Name | barley_pub |
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter region and partial cds Length = 5236 Score = 87.7 bits (44), Expect = 2e-15 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacatccatcttcactgaaaagtgaa 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3406 acacacactcacgcaacacacatccatcttcactgaaaagtgaa 3449
>ref|NM_016967.2| Mus musculus oligodendrocyte transcription factor 2 (Olig2), mRNA Length = 2462 Score = 46.1 bits (23), Expect = 0.006 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 1892 acacacactcacgcaacacacat 1914
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 46.1 bits (23), Expect = 0.006 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 161084 acacacactcacgcaacacacat 161106
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 46.1 bits (23), Expect = 0.006 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 4076 acacacactcacgcaacacacat 4098
>dbj|AK080615.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830025B18 product:oligodendrocyte transcription factor 2, full insert sequence Length = 2362 Score = 46.1 bits (23), Expect = 0.006 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 1870 acacacactcacgcaacacacat 1892
>gb|BC051967.1| Mus musculus oligodendrocyte transcription factor 2, mRNA (cDNA clone MGC:62240 IMAGE:5695592), complete cds Length = 2462 Score = 46.1 bits (23), Expect = 0.006 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 1892 acacacactcacgcaacacacat 1914
>dbj|AB038697.1| Mus musculus mRNA for Olig2 bHLH protein, complete cds Length = 2433 Score = 46.1 bits (23), Expect = 0.006 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 ||||||||||||||||||||||| Sbjct: 1871 acacacactcacgcaacacacat 1893
>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence Length = 157691 Score = 42.1 bits (21), Expect = 0.10 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cacacactcacgcaacacaca 22 ||||||||||||||||||||| Sbjct: 40763 cacacactcacgcaacacaca 40743
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence Length = 198821 Score = 42.1 bits (21), Expect = 0.10 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacac 21 ||||||||||||||||||||| Sbjct: 67476 acacacactcacgcaacacac 67496
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence Length = 235286 Score = 42.1 bits (21), Expect = 0.10 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cacacactcacgcaacacaca 22 ||||||||||||||||||||| Sbjct: 137837 cacacactcacgcaacacaca 137817
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 40.1 bits (20), Expect = 0.40 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 42630 acacactcacgcaacacaca 42611
>ref|XM_463123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 773 Score = 40.1 bits (20), Expect = 0.40 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 0.40 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 22625516 acacactcacgcaacacaca 22625535
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 0.40 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 22618545 acacactcacgcaacacaca 22618564
>dbj|AK070268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E14, full insert sequence Length = 773 Score = 40.1 bits (20), Expect = 0.40 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 acacactcacgcaacacaca 22 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>gb|AC153805.1| Homo sapiens chromosome 1 clone fa0648, complete sequence Length = 39930 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tccatcttcactgaaaagt 41 ||||||||||||||||||| Sbjct: 23599 tccatcttcactgaaaagt 23617
>gb|AF064859.1| Homo sapiens chromosome 21q22.3 PAC 141B3, complete sequence, containing ribosomal protein homologue pseudogene L23a Length = 122571 Score = 38.2 bits (19), Expect = 1.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 |||||||| |||||||||||||| Sbjct: 68726 acacacacccacgcaacacacat 68748
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 38.2 bits (19), Expect = 1.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 |||||||| |||||||||||||| Sbjct: 310136 acacacacccacgcaacacacat 310158
>emb|BX470173.6| Human DNA sequence from clone RP11-739C15 on chromosome 1, complete sequence Length = 66303 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tccatcttcactgaaaagt 41 ||||||||||||||||||| Sbjct: 56898 tccatcttcactgaaaagt 56916
>gb|AC153370.13| Mus musculus 10 BAC RP23-281M13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213550 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 ttcactgaaaagtgaatat 47 ||||||||||||||||||| Sbjct: 79026 ttcactgaaaagtgaatat 79044
>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete sequence Length = 167532 Score = 38.2 bits (19), Expect = 1.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 |||||||||||| |||||||||| Sbjct: 60057 acacacactcacacaacacacat 60079
>gb|AY948318.1| Haliotis discus hannai clone KHdh50 microsatellite sequence Length = 51 Score = 38.2 bits (19), Expect = 1.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacat 23 |||||||||||| |||||||||| Sbjct: 20 acacacactcacacaacacacat 42
>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence Length = 133079 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 ttcactgaaaagtgaatat 47 ||||||||||||||||||| Sbjct: 1693 ttcactgaaaagtgaatat 1675
>gb|AC158599.7| Mus musculus 10 BAC RP23-122O12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191825 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 ttcactgaaaagtgaatat 47 ||||||||||||||||||| Sbjct: 24762 ttcactgaaaagtgaatat 24744 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 188590 tcactgaaaagtgaatat 188573
>dbj|AB124887.1| Oryza barthii EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W159b-2 Length = 2960 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 cacgcaacacacatccatc 28 ||||||||||||||||||| Sbjct: 2872 cacgcaacacacatccatc 2890
>dbj|AB124886.1| Oryza glaberrima EPSPs, rps20 genes for 5-enolpyruvylshikimate-3-phosphate synthase, ribosomal protein small subunit 20, partial sequences, cultivar:W025 Length = 2961 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 cacgcaacacacatccatc 28 ||||||||||||||||||| Sbjct: 2873 cacgcaacacacatccatc 2891
>gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome 1, complete sequence Length = 138670 Score = 38.2 bits (19), Expect = 1.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 ttcactgaaaagtgaatat 47 ||||||||||||||||||| Sbjct: 75002 ttcactgaaaagtgaatat 74984
>gb|AC154046.1| Drosophila melanogaster clone BACR29O22, complete sequence Length = 177480 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||| ||||||||||| Sbjct: 166373 acacacactctcgcaacacaca 166394
>ref|NM_129910.1| Arabidopsis thaliana unknown protein AT2G43490 mRNA, complete cds Length = 2271 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 28 cttcactgaaaagtgaat 45 |||||||||||||||||| Sbjct: 800 cttcactgaaaagtgaat 817
>gb|AC113991.4| Mus musculus chromosome 3, clone RP24-138E17, complete sequence Length = 138057 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 65920 acacacactcacacaacacaca 65941
>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence Length = 194045 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 117543 acacacactcacacaacacaca 117564
>gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, complete sequence Length = 170117 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 158857 acacacactcacacaacacaca 158878
>gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, complete sequence Length = 191698 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 126712 acacacacgcacgcaacacaca 126733
>gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, complete sequence Length = 242587 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 29 ttcactgaaaagtgaata 46 |||||||||||||||||| Sbjct: 183252 ttcactgaaaagtgaata 183235
>gb|AC164292.4| Mus musculus BAC clone RP24-177C20 from chromosome 3, complete sequence Length = 185822 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 cacacactcacgcaacacacat 23 |||||||||| ||||||||||| Sbjct: 11503 cacacactcatgcaacacacat 11482
>gb|AC099628.7| Mus musculus chromosome 1, clone RP24-82L18, complete sequence Length = 171875 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 45179 tcactgaaaagtgaatat 45162
>gb|AC102595.9| Mus musculus chromosome 10, clone RP23-360M11, complete sequence Length = 223843 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 77106 tcactgaaaagtgaatat 77089
>gb|AC119959.8| Mus musculus chromosome 15, clone RP24-467H19, complete sequence Length = 163783 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 112798 acacacactcacacaacacaca 112777
>gb|AC145307.3| Mus musculus BAC clone RP24-400C6 from chromosome 17, complete sequence Length = 203180 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 77334 acacacactcacacaacacaca 77355
>gb|AC164542.2| Mus musculus chromosome 3, clone RP23-391J12, complete sequence Length = 202319 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 30831 acacacactcacacaacacaca 30852
>gb|AC073297.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-167N24, complete sequence Length = 96335 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 76375 acacacacacacgcaacacaca 76396
>gb|AC091283.11| Mus musculus chromosome 18, clone RP23-146P1, complete sequence Length = 220804 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 ||||||||||| |||||||||| Sbjct: 116372 acacacactcatgcaacacaca 116393
>gb|AC148477.3| Homo sapiens 12 BAC RP13-895J2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160802 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 ||||||||||| |||||||||| Sbjct: 136641 acacacactcatgcaacacaca 136662
>gb|AC158392.2| Mus musculus BAC clone RP24-87B5 from chromosome 14, complete sequence Length = 187798 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 175924 tcactgaaaagtgaatat 175907
>gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosome 17, complete sequence Length = 221980 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 169455 acacacactcacacaacacaca 169476
>ref|XM_983150.1| PREDICTED: Mus musculus similar to zinc finger protein 541 (LOC670763), mRNA Length = 4561 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 cacacatccatcttcact 34 |||||||||||||||||| Sbjct: 2291 cacacatccatcttcact 2274
>ref|XM_914413.2| PREDICTED: Mus musculus similar to zinc finger protein 541 (LOC638394), mRNA Length = 4561 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 cacacatccatcttcact 34 |||||||||||||||||| Sbjct: 2291 cacacatccatcttcact 2274
>ref|XM_984387.1| PREDICTED: Mus musculus similar to zinc finger protein 541 (LOC666528), mRNA Length = 4567 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 cacacatccatcttcact 34 |||||||||||||||||| Sbjct: 2291 cacacatccatcttcact 2274
>gb|AC107667.12| Mus musculus chromosome 3, clone RP23-187C2, complete sequence Length = 229632 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 cacacactcacgcaacacacat 23 |||||||||| ||||||||||| Sbjct: 140675 cacacactcatgcaacacacat 140654
>emb|CT025689.6| Mouse DNA sequence from clone RP24-236L7 on chromosome 14, complete sequence Length = 177482 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 161663 tcactgaaaagtgaatat 161680
>emb|CT025688.6| Mouse DNA sequence from clone RP24-310A8 on chromosome 9, complete sequence Length = 233365 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 32921 tcactgaaaagtgaatat 32904
>gb|AC102769.11| Mus musculus chromosome 17, clone RP23-89A3, complete sequence Length = 162417 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 104563 acacacactcacacaacacaca 104542
>gb|AY429354.1| Arabidopsis thaliana At2g43490 mRNA, partial sequence Length = 972 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 28 cttcactgaaaagtgaat 45 |||||||||||||||||| Sbjct: 899 cttcactgaaaagtgaat 916
>gb|AC128665.4| Mus musculus BAC clone RP24-141K21 from chromosome 18, complete sequence Length = 183285 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 ||||||||||| |||||||||| Sbjct: 46752 acacacactcatgcaacacaca 46773
>emb|Z74038.1|CEF58B4 Caenorhabditis elegans Cosmid F58B4, complete sequence Length = 23861 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 14434 acacacactcactcaacacaca 14455
>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete sequence Length = 140103 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 130906 tcactgaaaagtgaatat 130889
>gb|AC126428.3| Mus musculus BAC clone RP24-387B13 from chromosome 10, complete sequence Length = 225663 Score = 36.2 bits (18), Expect = 6.2 Identities = 24/26 (92%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacatcca 26 |||||||| ||| ||||||||||||| Sbjct: 202262 acacacacacactcaacacacatcca 202287
>gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome 17, complete sequence Length = 171820 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 78032 acacacactcacacaacacaca 78011
>gb|AC124742.4| Mus musculus BAC clone RP23-210N16 from 12, complete sequence Length = 208101 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 170472 acacacactcacacaacacaca 170451
>gb|AC126260.3| Mus musculus BAC clone RP23-338J1 from chromosome 9, complete sequence Length = 208028 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 23 tccatcttcactgaaaagtgaa 44 ||||||||||| |||||||||| Sbjct: 15168 tccatcttcaccgaaaagtgaa 15189
>gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complete sequence Length = 209359 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 104858 acacacactcacacaacacaca 104879 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 104731 acacacactcacacaacacaca 104752 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 104592 acacacactcacacaacacaca 104613 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 104465 acacacactcacacaacacaca 104486 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 103685 acacacactcacacaacacaca 103706 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 103450 acacacactcacacaacacaca 103471 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 102947 acacacactcacacaacacaca 102968 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 102577 acacacactcacacaacacaca 102598 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 102348 acacacactcacacaacacaca 102369
>gb|AC116325.5| Mus musculus BAC clone RP23-295K3 from 10, complete sequence Length = 196265 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 186814 acacacactcacacaacacaca 186835
>gb|AC121961.2| Mus musculus BAC clone RP24-255E8 from 10, complete sequence Length = 162752 Score = 36.2 bits (18), Expect = 6.2 Identities = 24/26 (92%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacacatcca 26 |||||||| ||| ||||||||||||| Sbjct: 47568 acacacacacactcaacacacatcca 47593
>gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-382G13, complete sequence Length = 142667 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 3012 acacacacacacgcaacacaca 3033
>gb|AC100752.10| Mus musculus chromosome 3, clone RP23-2A4, complete sequence Length = 208757 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 174013 acacacactcacacaacacaca 174034
>gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) (NR3C1) gene, complete cds Length = 127687 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 3244 tcactgaaaagtgaatat 3227
>emb|CR664351.1|CNS0FBL1 Tetraodon nigroviridis full-length cDNA Length = 1055 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 25 catcttcactgaaaagtg 42 |||||||||||||||||| Sbjct: 156 catcttcactgaaaagtg 173
>gb|AC112677.8| Mus musculus chromosome 3, clone RP23-176J23, complete sequence Length = 215247 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 63799 tcactgaaaagtgaatat 63782
>gb|AC161438.6| Mus musculus chromosome 18, clone RP23-62E1, complete sequence Length = 198865 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 29 ttcactgaaaagtgaata 46 |||||||||||||||||| Sbjct: 181633 ttcactgaaaagtgaata 181650
>gb|AC125452.7| Mus musculus, clone RP23-43F6, complete sequence Length = 162045 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 43693 acacacactcacacaacacaca 43714
>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence Length = 113210 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 27 tcttcactgaaaagtgaa 44 |||||||||||||||||| Sbjct: 48848 tcttcactgaaaagtgaa 48831
>gb|AC108799.9| Mus musculus, clone RP23-119G12, complete sequence Length = 228349 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 197462 tcactgaaaagtgaatat 197445
>emb|AL450307.18| Human DNA sequence from clone RP11-245K15 on chromosome 10, complete sequence Length = 159020 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 57867 acacacacacacgcaacacaca 57846
>emb|AL449104.5| Human DNA sequence from clone RP1-173P22 on chromosome 6 Contains the 3' end of the HCRTR2 gene for hypocretin (orexin) receptor 2, complete sequence Length = 120466 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 65203 acacacacacacgcaacacaca 65224
>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the WNT9A gene for wingless-type MMTV integration site family, member 9A and a CpG island, complete sequence Length = 141703 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 75437 tcactgaaaagtgaatat 75454
>emb|AL354776.15| Human DNA sequence from clone RP11-196N14 on chromosome 20 Contains the 3' end of the PPP4R1L gene for protein phosphatase 4 regulatory subunit 1-like, the C20orf85 gene for an ankyrin domain-containing protein, the C20orf86 gene and three CpG islands, complete sequence Length = 146208 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 19 cacatccatcttcactga 36 |||||||||||||||||| Sbjct: 79412 cacatccatcttcactga 79395
>gb|AC091536.2| Rattus norvegicus strain Brown Norway clone RP31-547A5, complete sequence Length = 175512 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 1067 acacacactcacacaacacaca 1046 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 1032 acacacactcacacaacacaca 1011 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 603 acacacactcacacaacacaca 582 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 550 acacacactcacacaacacaca 529
>gb|AC091617.2| Rattus norvegicus strain Brown Norway clone RP31-371K3, complete sequence Length = 150494 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 150455 acacacactcacacaacacaca 150434 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 150420 acacacactcacacaacacaca 150399 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 149991 acacacactcacacaacacaca 149970 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 149938 acacacactcacacaacacaca 149917
>emb|AL132981.12|HSDJ80L13 Human DNA sequence from clone RP1-80L13 on chromosome 20 Contains STSs and GSSs, complete sequence Length = 112186 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 29 ttcactgaaaagtgaata 46 |||||||||||||||||| Sbjct: 85157 ttcactgaaaagtgaata 85174
>emb|AL109620.5|HSBG54N10 Human DNA sequence from clone GS1-54N10 on chromosome Xq26.3-28, complete sequence Length = 113148 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 34904 acacacacacacgcaacacaca 34883
>emb|Y10165.2|CPPG12 Claviceps purpurea pg1 gene for polygalacturonase & pg2 gene for polygalacturonase Length = 4777 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 642 acacacacacacgcaacacaca 663
>gb|AC155168.3| Mus musculus BAC clone RP23-208M17 from chromosome 10, complete sequence Length = 174112 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 68072 acacacactcacacaacacaca 68093
>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the Vamp2 gene for vesicle-associated membrane 2, the Per1 gene for period homolog 1 (Drosophila), the Hes7 gene for hairy and enhancer of split 7 (Drosophila), the Aloxe3 gene for arachidonate lipoxygenase 3, the Alox12b gene for arachidonate 12-lipoxygenase 12R type, the Alox15b gene for arachidonate 15-lipoxygenase second type, the Gucy2e gene for guanylate cyclase 2e, a novel gene, the gene for LYST-interacting protein LIP8 (Lip8-pending), the gene for the likely ortholog of H. sapiens trafficking protein particle complex 1 (TRAPPC1)), the Kcnab3 gene for potassium voltage-gated channel shaker-related subfamily beta member 3, a novel gene, the 3' end of the Chd3 gene for chromodomain helicase DNA binding protein 3 and six CpG islands, complete sequence Length = 261224 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 3442 acacacacacacgcaacacaca 3421
>gb|AC164159.2| Mus musculus BAC clone RP23-339C17 from chromosome 17, complete sequence Length = 206481 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 159835 acacacactcacacaacacaca 159856
>gb|AC163678.3| Mus musculus BAC clone RP24-104D14 from chromosome 10, complete sequence Length = 196603 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 158401 tcactgaaaagtgaatat 158418
>emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 8/17 Length = 349652 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 23 tccatcttcactgaaaag 40 |||||||||||||||||| Sbjct: 141077 tccatcttcactgaaaag 141060
>emb|AL954167.4| Mouse DNA sequence from clone RP23-300M3 on chromosome 11 Contains a zinc finger protein pseudogene, complete sequence Length = 190351 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 40113 tcactgaaaagtgaatat 40096
>gb|AC005252.1| Homo sapiens 12q24.2 PAC RPCI4-800O15 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 126327 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 acacatccatcttcactg 35 |||||||||||||||||| Sbjct: 107339 acacatccatcttcactg 107322
>gb|AC159897.2| Mus musculus BAC clone RP23-191E14 from chromosome 12, complete sequence Length = 216485 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 11960 acacacactcacacaacacaca 11939
>gb|AC110048.2| Homo sapiens chromosome 15, clone RP11-622C24, complete sequence Length = 163592 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 ccatcttcactgaaaagt 41 |||||||||||||||||| Sbjct: 138835 ccatcttcactgaaaagt 138818
>gb|AC144518.32| Pan troglodytes clone rp43-23c18, complete sequence Length = 186577 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 48092 acacacactcacacaacacaca 48071
>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence Length = 164668 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 119843 tcactgaaaagtgaatat 119860
>gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167638 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||| ||||||||||| Sbjct: 65383 acacacactctcgcaacacaca 65362
>gb|AC087321.20| Homo sapiens 12 BAC RP11-606D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123010 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 75336 acacacacacacgcaacacaca 75357
>gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map EG05C12, complete sequence Length = 85835 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 29 ttcactgaaaagtgaata 46 |||||||||||||||||| Sbjct: 50457 ttcactgaaaagtgaata 50440
>gb|AC002335.3| Arabidopsis thaliana chromosome 2 clone T1O24 map CIC10F02, complete sequence Length = 102057 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 28 cttcactgaaaagtgaat 45 |||||||||||||||||| Sbjct: 71995 cttcactgaaaagtgaat 71978
>dbj|AK148821.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120451J01 product:hypothetical protein, full insert sequence Length = 2483 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 atccatcttcactgaaaa 39 |||||||||||||||||| Sbjct: 2065 atccatcttcactgaaaa 2048
>gb|AY062031.1| Homo sapiens hypocretin receptor 2 (HCRTR2) gene, complete cds Length = 168575 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 99823 acacacacacacgcaacacaca 99844
>gb|AC090461.4| Homo sapiens chromosome 15, clone RP11-100A11, complete sequence Length = 167218 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 ccatcttcactgaaaagt 41 |||||||||||||||||| Sbjct: 139027 ccatcttcactgaaaagt 139010
>dbj|AK161007.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022442O12 product:hypothetical TPR-like containing protein, full insert sequence Length = 2625 Score = 36.2 bits (18), Expect = 6.2 Identities = 24/26 (92%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacacatcca 26 |||||||| ||| ||||||||||||| Sbjct: 1778 acacacacacactcaacacacatcca 1753
>gb|DQ099347.1| Bombus lucorum clone BL16 microsatellite sequence Length = 276 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 163 acacacacacacgcaacacaca 142 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 148 acacacacacacgcaacacaca 127 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 131 acacacacacacgcaacacaca 110
>dbj|AK156446.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830022C22 product:hypothetical protein, full insert sequence Length = 2410 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 atccatcttcactgaaaa 39 |||||||||||||||||| Sbjct: 2241 atccatcttcactgaaaa 2224
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 73997 acacacacgcacgcaacacaca 74018 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 73960 acacacacacacgcaacacaca 73981
>gb|AC154491.2| Mus musculus BAC clone RP24-106D8 from chromosome 17, complete sequence Length = 146960 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 138929 acacacactcacacaacacaca 138908
>gb|AC151733.5| Mus musculus BAC clone RP23-89N20 from chromosome 7, complete sequence Length = 204775 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 cacacatccatcttcact 34 |||||||||||||||||| Sbjct: 117276 cacacatccatcttcact 117259
>gb|AC008569.7| Homo sapiens chromosome 19 clone CTC-548K16, complete sequence Length = 227245 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 acacacatccatcttcac 33 |||||||||||||||||| Sbjct: 48927 acacacatccatcttcac 48944
>emb|BX324142.7| Zebrafish DNA sequence from clone CH211-196F19 in linkage group 20, complete sequence Length = 177066 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 13045 acacacactcacacaacacaca 13024
>gb|AC026464.7| Homo sapiens chromosome 16 clone RP11-343C2, complete sequence Length = 190185 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 165877 acacacacacacgcaacacaca 165856
>gb|AC157515.2| Mus musculus BAC clone RP24-226N22 from chromosome 12, complete sequence Length = 143190 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 atccatcttcactgaaaa 39 |||||||||||||||||| Sbjct: 113244 atccatcttcactgaaaa 113227
>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence Length = 171057 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 139867 acacacactcacacaacacaca 139846
>gb|BC095756.1| Danio rerio hypothetical protein LOC553473, mRNA (cDNA clone IMAGE:7273893), partial cds Length = 1034 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 32 acacacactcactcaacacaca 53
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 36.2 bits (18), Expect = 6.2 Identities = 24/26 (92%) Strand = Plus / Plus Query: 3 acacactcacgcaacacacatccatc 28 |||||| || |||||||||||||||| Sbjct: 725028 acacacacaggcaacacacatccatc 725053
>gb|AC004616.1| Homo sapiens X BAC GSHB-536K7 (Genome Systems Human BAC library) complete sequence Length = 149752 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 119756 acacacacacacgcaacacaca 119735
>gb|AC004916.2|AC004916 Homo sapiens PAC clone RP5-891L14 from 7p22, complete sequence Length = 129014 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 126133 tcactgaaaagtgaatat 126116
>gb|AC005186.3| Homo sapiens 12 PAC RP5-916L7 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 134471 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 acacatccatcttcactg 35 |||||||||||||||||| Sbjct: 117630 acacatccatcttcactg 117647
>gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome 8, complete sequence Length = 168189 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 114386 tcactgaaaagtgaatat 114403
>emb|BX842668.3| Mouse DNA sequence from clone RP23-161M5 on chromosome 2, complete sequence Length = 105989 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 2630 tcactgaaaagtgaatat 2647
>emb|CR293523.11| Zebrafish DNA sequence from clone DKEY-104J7 in linkage group 7, complete sequence Length = 214581 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 aacacacatccatcttca 32 |||||||||||||||||| Sbjct: 108235 aacacacatccatcttca 108218
>emb|BX255885.5| Zebrafish DNA sequence from clone CH211-213M12 in linkage group 4, complete sequence Length = 134701 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 ||||||||||||| |||||||| Sbjct: 120234 acacacactcacgtaacacaca 120255
>gb|AY726769.1| Myrmica scabrinodis clone Msca9 microsatellite sequence Length = 645 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 323 acacacacacacgcaacacaca 344
>gb|AC116483.10| Mus musculus chromosome 1, clone RP23-424K5, complete sequence Length = 194546 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 63359 tcactgaaaagtgaatat 63342
>gb|AC004168.2|AC004168 Homo sapiens chromosome 4 clone B159L21 map 4q25, complete sequence Length = 185566 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 18958 acacacactcacacaacacaca 18979
>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete sequence Length = 282116 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||| ||||||||||| Sbjct: 261095 acacacactctcgcaacacaca 261074
>gb|AC115689.22| Mus musculus chromosome 9, clone RP23-166A9, complete sequence Length = 221548 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 23 tccatcttcactgaaaagtgaa 44 ||||||||||| |||||||||| Sbjct: 93451 tccatcttcaccgaaaagtgaa 93430
>gb|AC174776.3| Mus musculus BAC clone RP23-349J24 from chromosome 12, complete sequence Length = 195214 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 atccatcttcactgaaaa 39 |||||||||||||||||| Sbjct: 125890 atccatcttcactgaaaa 125873 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 atccatcttcactgaaaa 39 |||||||||||||||||| Sbjct: 50826 atccatcttcactgaaaa 50809
>gb|AC166323.5| Mus musculus BAC clone RP24-491I24 from chromosome 12, complete sequence Length = 143321 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 atccatcttcactgaaaa 39 |||||||||||||||||| Sbjct: 110199 atccatcttcactgaaaa 110182 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 atccatcttcactgaaaa 39 |||||||||||||||||| Sbjct: 36184 atccatcttcactgaaaa 36167
>gb|AC174762.1| Gasterosteus aculeatus clone VMRC28-105C03, complete sequence Length = 136351 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 15 aacacacatccatcttcactga 36 ||||||||||||||| |||||| Sbjct: 68695 aacacacatccatctgcactga 68674
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 36.2 bits (18), Expect = 6.2 Identities = 24/26 (92%) Strand = Plus / Plus Query: 3 acacactcacgcaacacacatccatc 28 |||||| || |||||||||||||||| Sbjct: 725028 acacacacaggcaacacacatccatc 725053
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 22 atccatcttcactgaaaa 39 |||||||||||||||||| Sbjct: 180854 atccatcttcactgaaaa 180871
>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118211 Score = 36.2 bits (18), Expect = 6.2 Identities = 24/26 (92%) Strand = Plus / Minus Query: 3 acacactcacgcaacacacatccatc 28 |||||| || |||||||||||||||| Sbjct: 54106 acacacacaggcaacacacatccatc 54081
>gb|AC145568.4| Mus musculus BAC clone RP24-473H20 from 6, complete sequence Length = 201210 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 157606 acacacactcacacaacacaca 157627
>emb|CT025641.10| Mouse DNA sequence from clone RP24-322A17 on chromosome 17, complete sequence Length = 122522 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 22521 acacacactcacacaacacaca 22500
>emb|BX004998.7| Mouse DNA sequence from clone RP23-402C17 on chromosome 4, complete sequence Length = 179875 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 54066 tcactgaaaagtgaatat 54049
>gb|AY861514.1| Malus x domestica clone MS11D10 microsatellite sequence Length = 317 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 22 acacacactcacacaacacaca 43
>emb|AL606927.12| Mouse DNA sequence from clone RP23-144I6 on chromosome 4, complete sequence Length = 212373 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 27 tcttcactgaaaagtgaatatc 48 ||||||||||||||| |||||| Sbjct: 43600 tcttcactgaaaagtaaatatc 43579
>emb|AL627122.18| Mouse DNA sequence from clone RP23-132E8 on chromosome 4, complete sequence Length = 166814 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 acacacactcacgcaacacaca 22 |||||||||||| ||||||||| Sbjct: 88131 acacacactcacacaacacaca 88110
>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete sequence Length = 183985 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 25 catcttcactgaaaagtg 42 |||||||||||||||||| Sbjct: 102934 catcttcactgaaaagtg 102951
>emb|AL808018.7| Mouse DNA sequence from clone RP23-473C10 on chromosome X, complete sequence Length = 172723 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 acacatccatcttcactg 35 |||||||||||||||||| Sbjct: 64711 acacatccatcttcactg 64728
>emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on chromosome 2, complete sequence Length = 203185 Score = 36.2 bits (18), Expect = 6.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 tcactgaaaagtgaatat 47 |||||||||||||||||| Sbjct: 192790 tcactgaaaagtgaatat 192807
>dbj|AB047297.1| Rattus norvegicus gene for sst2 somatostatin receptor, 5'UTR and partial cds Length = 9492 Score = 36.2 bits (18), Expect = 6.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 acacacactcacgcaacacaca 22 |||||||| ||||||||||||| Sbjct: 9026 acacacacacacgcaacacaca 9047 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 579,239 Number of Sequences: 3902068 Number of extensions: 579239 Number of successful extensions: 194558 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 193749 Number of HSP's gapped (non-prelim): 809 length of query: 48 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 28 effective length of database: 17,155,003,908 effective search space: 480340109424 effective search space used: 480340109424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)