ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl32h01 |
|---|---|
| Clone Library Name | barley_pub |
>NOL6_MOUSE (Q8R5K4) Nucleolar protein 6 (Nucleolar RNA-associated protein)| (Nrap) Length = 1141 Score = 65.5 bits (158), Expect = 5e-11 Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 8/135 (5%) Frame = +1 Query: 40 LKLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLA------ 201 L++ ELLK+ R S V + I+ VPP A ++ G+ Sbjct: 84 LQVEELLKEVRLSEKKKERIDNFLKEVTKRIQKVPPVPEAELTDQSWL-PAGVRVPLHQV 142 Query: 202 --AEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKDFLNHRYHAKRC 375 A K +F FRPP + + GS+ RPD+ D+ V +P+E +KD LN RY KR Sbjct: 143 PYAVKGSFRFRPPSQITVVGSYLLDTCMRPDINVDVAVTMPREILQDKDGLNQRYFRKRA 202 Query: 376 LYLRVIDKSLRSSPL 420 LYL + L PL Sbjct: 203 LYLAHLAYHLAQDPL 217
>NOL6_HUMAN (Q9H6R4) Nucleolar protein 6 (Nucleolar RNA-associated protein)| (Nrap) Length = 1146 Score = 59.3 bits (142), Expect = 4e-09 Identities = 30/73 (41%), Positives = 39/73 (53%) Frame = +1 Query: 202 AEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKDFLNHRYHAKRCLY 381 A K F F PP V + GS+ G RPD+ D+ + +P+E +KD LN RY KR LY Sbjct: 147 AVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDVALTMPREILQDKDGLNQRYFRKRALY 206 Query: 382 LRVIDKSLRSSPL 420 L + L PL Sbjct: 207 LAHLAHHLAQDPL 219
>NOL6_XENLA (Q6NRY2) Nucleolar protein 6| Length = 1147 Score = 57.4 bits (137), Expect = 1e-08 Identities = 28/68 (41%), Positives = 38/68 (55%) Frame = +1 Query: 217 FSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKDFLNHRYHAKRCLYLRVID 396 FSF PP +++ GS+ G +P++ DL V +P+E KD LN RY KR LYL I Sbjct: 152 FSFLPPSSIKVVGSYLLGTCIKPEINVDLAVTMPQEILQVKDNLNQRYSRKRALYLAHIA 211 Query: 397 KSLRSSPL 420 L + L Sbjct: 212 SHLTDNKL 219
>NOL6_XENTR (Q5M7P5) Nucleolar protein 6| Length = 1145 Score = 56.2 bits (134), Expect = 3e-08 Identities = 27/68 (39%), Positives = 38/68 (55%) Frame = +1 Query: 217 FSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKDFLNHRYHAKRCLYLRVID 396 F F PP +++ GS+ G +P++ DL V +P+E KD LN RY KR LYL I Sbjct: 152 FCFLPPSSIKVVGSYLLGTCIKPEINVDLAVTMPQEILQAKDNLNQRYSRKRALYLAHIA 211 Query: 397 KSLRSSPL 420 L ++ L Sbjct: 212 SHLANNEL 219
>UTP22_YEAST (P53254) Nucleolar protein UTP22| Length = 1237 Score = 41.2 bits (95), Expect = 0.001 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +1 Query: 217 FSFRPPEVVRLAGSHAAGAVTRPDVAS-DLLVRLPKECFHEKDFLNHRYHAKRCLYLRVI 393 F+++ P++ + + +P+ +S D L+ +PKE F +KDFLN R KR +YL + Sbjct: 176 FNYKKPDISLIGSFALKAGIYQPNGSSIDTLLTMPKELFEKKDFLNFRCLHKRSVYLAYL 235 Query: 394 DKSL 405 L Sbjct: 236 THHL 239
>YMP3_STRCO (P43168) Hypothetical oxidoreductase in mprA 5'region (EC 1.-.-.-)| (ORF3) Length = 251 Score = 33.5 bits (75), Expect = 0.22 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%) Frame = +1 Query: 67 ARPSATSLRAAGEATDAVGELIKSVPPQQAAPEA---------ASGFVRDL-----GLAA 204 ARPS +AAGE T A+G +++VP PE+ A+G V DL G+A Sbjct: 41 ARPSPALEKAAGELT-ALGAEVRTVPFDALDPESHQASLGPVFAAGDV-DLVLLRFGIAG 98 Query: 205 EKLAFSFRPPEVVRLAGSHAAGAV 276 ++ RP + VR+A ++ GAV Sbjct: 99 DQARDESRPLDAVRVAQTNYTGAV 122
>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)| Length = 521 Score = 32.7 bits (73), Expect = 0.37 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = +1 Query: 142 PPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPK 321 P QQ + LG +LAF+ PP VV LAG +G T +A L VRL + Sbjct: 70 PAQQIVKIVNEELIGILGGETRQLAFAKTPPTVVMLAGLQGSGKTT---LAGKLAVRLRR 126 Query: 322 E 324 + Sbjct: 127 Q 127
>Y2559_MYCTU (Q50739) Hypothetical protein Rv2559c/MT2636| Length = 452 Score = 32.7 bits (73), Expect = 0.37 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = +1 Query: 10 AMVSAEYSIDLKLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRD 189 A+ A ++DL + AR + T+L A EA A GEL+ +++ +AA + RD Sbjct: 202 AVAVAPEAVDLLVQLAAGDARRALTALEVAAEAAQAAGELVSVQTIERSVDKAAVRYDRD 261
>ASPH_HUMAN (Q12797) Aspartyl/asparaginyl beta-hydroxylase (EC 1.14.11.16)| (Aspartate beta-hydroxylase) (ASP beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) Length = 757 Score = 32.0 bits (71), Expect = 0.64 Identities = 29/104 (27%), Positives = 42/104 (40%) Frame = +1 Query: 43 KLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFS 222 K + +K +A LR G+ +AV + V +P A G + + LA Sbjct: 336 KFDKTIKAELDAAEKLRKRGKIEEAVNAFKELVRKYPQSPRARYGKAQ----CEDDLAEK 391 Query: 223 FRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKDFLNH 354 R EV+R A + PDV +DLL K + FL H Sbjct: 392 RRSNEVLRGAIETYQEVASLPDVPADLLKLSLKRRSDRQQFLGH 435
>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)| Length = 325 Score = 31.2 bits (69), Expect = 1.1 Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Frame = -2 Query: 315 QADEKVRGDVG----PGDRAGRVAPGEPHHLRRPEGKR*LFGREA-QVPHEPRG 169 + + VRGD+G PG + PGEP LR PEG R L G E + P PRG Sbjct: 88 EGEAGVRGDLGDMGQPGPKGSVGNPGEPG-LRGPEGIRGLPGVEGPRGPPGPRG 140
>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +1 Query: 142 PPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRL 315 P QQ + LG +LAF+ PP VV LAG +G T +A L RL Sbjct: 70 PAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTT---LAGKLAARL 124
>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +1 Query: 142 PPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVASDLLVRL 315 P QQ + LG +LAF+ PP VV LAG +G T +A L RL Sbjct: 70 PAQQVVKIVNEELISILGGETRELAFAKTPPTVVMLAGLQGSGKTT---LAGKLAARL 124
>ERF_MOUSE (P70459) ETS domain-containing transcription factor ERF| Length = 551 Score = 31.2 bits (69), Expect = 1.1 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 Query: 309 DEKVRGDVGPGDRAGRVAP 253 D+KVRGDVGPG+ G + P Sbjct: 512 DKKVRGDVGPGESGGPLTP 530
>VSX1_CHICK (Q9IAL2) Visual system homeobox 1 (Transcription factor VSX1)| (Homeobox protein Chx10-1) Length = 350 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +1 Query: 61 KQARPSATSLRAAGEA-TDAVGELIKSVPPQQAAPEAASGF 180 + ARP LRA G A TD +G + PP AAP A G+ Sbjct: 38 RSARPGGAGLRAKGFAITDLLGLEAELQPPPGAAPGPAGGY 78
>ASPH_BOVIN (Q28056) Aspartyl/asparaginyl beta-hydroxylase (EC 1.14.11.16)| (Aspartate beta-hydroxylase) (ASP beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) Length = 754 Score = 30.4 bits (67), Expect = 1.9 Identities = 27/104 (25%), Positives = 42/104 (40%) Frame = +1 Query: 43 KLSELLKQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFS 222 K + +K +A LR G+ +AV + V +P A G + + LA Sbjct: 332 KFDKTIKAELDAAEKLRKRGKIEEAVNAFEELVRKYPQSPGARYGKAQ----CEDDLAEK 387 Query: 223 FRPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKDFLNH 354 R E++R A A + PD +DL+ K + FL H Sbjct: 388 RRSNEILRRAIETYQEAASLPDAPTDLVKLSLKRRSDRQQFLGH 431
>K1543_MOUSE (Q80VC9) Protein KIAA1543| Length = 1252 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/64 (23%), Positives = 30/64 (46%) Frame = +1 Query: 115 AVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEVVRLAGSHAAGAVTRPDVA 294 + GE++K PP + +P+A + + +F+ R ++V+ G+ T VA Sbjct: 534 STGEILKPPPPSEGSPKAVASSPAANNSEVKMTSFAERKKQLVKAEAESGLGSPTSTPVA 593 Query: 295 SDLL 306 + L Sbjct: 594 PEAL 597
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/25 (56%), Positives = 14/25 (56%) Frame = +2 Query: 221 PSGRRRWCGSPGATRPARSPGPTSP 295 P GRRR SP TR RSP P P Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPP 566
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.6 bits (65), Expect = 3.2 Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Frame = -2 Query: 315 QADEKVRGDVG----PGDRAGRVAPGEPHHLRRPEGKR*LFGREA-QVPHEPRG 169 + + RGD+G PG + PGEP LR PEG R L G E + P PRG Sbjct: 684 EGEAGARGDLGDMGQPGPKGSVGNPGEPG-LRGPEGIRGLPGVEGPRGPPGPRG 736
>LATA_LATMA (P23631) Alpha-latrotoxin precursor (Alpha-LTX)| Length = 1401 Score = 29.3 bits (64), Expect = 4.1 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 2/91 (2%) Frame = +1 Query: 40 LKLSELLKQARPSATSLRAAGE--ATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKL 213 + + E++++A S +R GE + E+ + QQ + AS + DL Sbjct: 2 ISVGEIMERANHSLVRMRREGEDLTLEEKAEICSELELQQKYVDIASNIIGDLSSL---- 57 Query: 214 AFSFRPPEVVRLAGSHAAGAVTRPDVASDLL 306 P ++AG+ AA A+T VAS L Sbjct: 58 ------PIAGKIAGTIAAAAMTATHVASGRL 82
>DPY2_CAEEL (P35799) Cuticle collagen dpy-2 precursor (Protein dumpy-2)| Length = 360 Score = 29.3 bits (64), Expect = 4.1 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 227 GRRRWCGSPGATRPARSPGPTSP 295 G + W G PGA P PGP P Sbjct: 268 GEKGWPGPPGAPGPGGMPGPNGP 290
>RPOB_STAPU (Q32RW5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1068 Score = 28.9 bits (63), Expect = 5.4 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Frame = -2 Query: 303 KVRGDVGPGD-RAGRVAPGE-PHHLRRPEGK--R*LFGREAQVPHE 178 K+ V PGD G++AP E PH LR PEGK + +FG +A E Sbjct: 727 KIGAWVEPGDVLVGKLAPLEAPHLLRSPEGKLLQAIFGVQAITTRE 772
>ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 16) (ADAM-TS 16) (ADAM-TS16) Length = 1224 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -3 Query: 266 AAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGGT 138 ++W P SRT GG + R R TNP+ + G C G+ Sbjct: 593 SSWSPCSRTCGGG-------VSHRSRLCTNPKPSHGGKFCEGS 628
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 28.9 bits (63), Expect = 5.4 Identities = 14/24 (58%), Positives = 14/24 (58%) Frame = +2 Query: 224 SGRRRWCGSPGATRPARSPGPTSP 295 SGRRR SP TR RSP P P Sbjct: 557 SGRRRRSPSPPPTRRRRSPSPAPP 580
>DNAE2_GLUOX (Q5HXU1) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 901 Score = 28.9 bits (63), Expect = 5.4 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Frame = +1 Query: 91 RAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAE--KLAFSFRPPEVV----RLA 252 + G D G+L K + A P+ DLGL + +L+ +F ++ R Sbjct: 281 KVLGLPEDLTGQLSKHIASSLADPDLCKARAADLGLNLKDRRLSLTFHLARLLLGFPRQL 340 Query: 253 GSHAAGAVTRPDVASDLLVRLP 318 G+H G V D +L+ +P Sbjct: 341 GTHPGGFVLTEDRLDELVPLMP 362
>CISY_PIG (P00889) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)| Length = 464 Score = 28.9 bits (63), Expect = 5.4 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 9/67 (13%) Frame = -2 Query: 348 QEILFMKTFLRQ------ADEKVRGDVGPGDRAGRVAPGEPHHLRRPEGKR*LFGRE--- 196 QE+L T L++ +DEK+R + +GRV PG H + R R RE Sbjct: 306 QEVLVWLTQLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFAL 365 Query: 195 AQVPHEP 175 +PH+P Sbjct: 366 KHLPHDP 372
>CISY_MOUSE (Q9CZU6) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)| Length = 464 Score = 28.9 bits (63), Expect = 5.4 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Frame = -2 Query: 348 QEILFMKTFLRQ------ADEKVRGDVGPGDRAGRVAPGEPHHLRRPEGKR*LFGREAQV 187 QE+L T L++ +DEK+R + +GRV PG H + R R RE + Sbjct: 306 QEVLVWLTQLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYSCQREFAL 365 Query: 186 PHEPR 172 H P+ Sbjct: 366 KHLPK 370
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 28.9 bits (63), Expect = 5.4 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = -2 Query: 282 PGDRAGRVAPGEPHHLRRP---EGKR*LFGREAQVPHEPRGS 166 PG+ + P EPH R P EG+R RE +P P G+ Sbjct: 1697 PGESSSASEPSEPHRRRPPASHEGERKELPREQPLPPGPIGT 1738
>PTFAX_XANCP (P45597) Multiphosphoryl transfer protein (MTP) [Includes:| Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system enzyme I); Phosphocarrier protein HPr (Protein H); Fructose-specific phosphotransferase enzyme I Length = 838 Score = 28.5 bits (62), Expect = 7.1 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = -2 Query: 366 SMVPVIQEILFMKTFLRQADEKVRGDVGPGDRAGRVAPGEPHHLRRPEGKR*LF-GREAQ 190 S+ PV +++ ++ R D+ + AG VAPG +RR EG F G Sbjct: 5 SIAPVTPDLVRLRATARDKDDAIAQAAQLLVAAGCVAPGYDASMRRREGLANTFLGHGLA 64 Query: 189 VPH 181 +PH Sbjct: 65 IPH 67
>YJP1_SCHPO (Q9P6S0) Hypothetical threonine-rich protein C1742.01 precursor| Length = 1563 Score = 28.5 bits (62), Expect = 7.1 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Frame = -3 Query: 308 TRRSEATSGLVTAPAAWLPASRTTSGGRKENA-----SFSAARPRSLTNPEAASGAACCG 144 T EA+ + +P+ +LP S TTSG + NA +F A + NP G Sbjct: 123 TSGKEASYAIQASPSTFLPDSTTTSGSQVSNAVEASSTFVADTTSTSCNPATVLIVTTSG 182 Query: 143 GT 138 T Sbjct: 183 ST 184
>CISY_HUMAN (O75390) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)| Length = 466 Score = 28.5 bits (62), Expect = 7.1 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = -2 Query: 348 QEILFMKTFLRQ------ADEKVRGDVGPGDRAGRVAPGEPHHLRRPEGKR*LFGREAQV 187 QE+L T L++ +DEK+R + +GRV PG H + R R RE + Sbjct: 306 QEVLVWLTQLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFAL 365 Query: 186 PHEP 175 H P Sbjct: 366 KHLP 369
>TNKS2_HUMAN (Q9H2K2) Tankyrase 2 (EC 2.4.2.30) (TANK2) (Tankyrase II) (TNKS-2)| (TRF1-interacting ankyrin-related ADP-ribose polymerase 2) (Tankyrase-like protein) (Tankyrase-related protein) Length = 1166 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +2 Query: 248 SPGATRPARSPGPTSPLTFSSA 313 SPGAT A S GP+SP + S+A Sbjct: 817 SPGATADALSSGPSSPSSLSAA 838
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 28.5 bits (62), Expect = 7.1 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -3 Query: 248 SRTTSGGRKENASFSAARPRSLTNPEAASGAACC 147 SR SGG N S PRS +P G A C Sbjct: 527 SRGGSGGNSSNDKLSGPAPRSRLDPAKVLGTALC 560
>STRN_HUMAN (O43815) Striatin| Length = 780 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 330 KTFLRQADEKVRGDVGPGDRAGRVAPGEPHHL 235 K+F+ ADE + ++GPG+ AG E L Sbjct: 407 KSFIMGADEALESELGPGELAGLTVANEADSL 438
>COX5B_PONPY (Q5REG2) Cytochrome c oxidase polypeptide Vb, mitochondrial| precursor (EC 1.9.3.1) Length = 129 Score = 28.1 bits (61), Expect = 9.2 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Frame = +1 Query: 49 SELLKQARP-SATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSF 225 S LL+ A +A +LRA G + A + S E A+G R++ LAA+K Sbjct: 3 SRLLRGAGALAAQALRARGPSGAAAVRSMASGGGVPTDEEQATGLEREIMLAAKK---GL 59 Query: 226 RPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKD------FLNHRYHAKRC 375 P V LA A+G P++ + + C E+D F H+ A+RC Sbjct: 60 DPYNV--LAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWFWLHKGEAQRC 113
>COX5B_HUMAN (P10606) Cytochrome c oxidase polypeptide Vb, mitochondrial| precursor (EC 1.9.3.1) Length = 129 Score = 28.1 bits (61), Expect = 9.2 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Frame = +1 Query: 49 SELLKQARP-SATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSF 225 S LL+ A +A +LRA G + A + S E A+G R++ LAA+K Sbjct: 3 SRLLRGAGTLAAQALRARGPSGAAAMRSMASGGGVPTDEEQATGLEREIMLAAKK---GL 59 Query: 226 RPPEVVRLAGSHAAGAVTRPDVASDLLVRLPKECFHEKD------FLNHRYHAKRC 375 P V LA A+G P++ + + C E+D F H+ A+RC Sbjct: 60 DPYNV--LAPKGASGTREDPNLVPSISNKRIVGCICEEDNTSVVWFWLHKGEAQRC 113
>TRPA_BRAJA (Q89WE4) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 278 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +1 Query: 34 IDLKLSELLKQARPSATSLRAAGEATDAVG-ELIKSVPPQQA 156 ID++ +EL KQ R + + AG+ A E+IK++P A Sbjct: 5 IDIRFAELAKQGRSAFVTFLMAGDPDPATSLEIIKALPKSGA 46
>NUP62_RAT (P17955) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 525 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = -3 Query: 290 TSGLVTAPAAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGGT 138 T+ T PAA P + TTS G AS +AA S T + S A T Sbjct: 200 TTAGATQPAAATPTAATTSAGSTLFASIAAAPASSSTTVLSLSAPATTAAT 250
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +3 Query: 33 HRPQALRAPQASAAERHLS 89 H+PQ R+PQA+A+ HLS Sbjct: 887 HQPQKARSPQAAASPAHLS 905
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +3 Query: 33 HRPQALRAPQASAAERHLS 89 H+PQ R+PQA+A+ HLS Sbjct: 887 HQPQKARSPQAAASPAHLS 905
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +3 Query: 33 HRPQALRAPQASAAERHLS 89 H+PQ R+PQA+A+ HLS Sbjct: 887 HQPQKARSPQAAASPAHLS 905
>DAPB_METBF (Q46DC3) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)| Length = 263 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +1 Query: 4 EAAMVSAEYSIDL-KLSELLKQARPSATSLRAAGEATDAVG 123 EAA A+Y I++ + K+ PS T+LRAA ++AVG Sbjct: 141 EAAKYLADYDIEIIEAHHNQKKDAPSGTALRAADIISEAVG 181
>AREA_EMENI (P17429) Nitrogen regulatory protein areA| Length = 876 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = -3 Query: 314 KRTRRSEATSGLVTAPAAWLPASRTTSGGRKENASFSAARPRSLTNPEAASGAACCGGT 138 KR RR E S + A + S T+SGGR + + A P + NP S AA G + Sbjct: 812 KRQRRLEKASDVDMAESP----SSTSSGGRSKVVPLAPAMPPAAVNPANHSIAAGQGAS 866
>HISX_NITMU (Q2YAU5) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 440 Score = 28.1 bits (61), Expect = 9.2 Identities = 23/72 (31%), Positives = 30/72 (41%) Frame = +1 Query: 61 KQARPSATSLRAAGEATDAVGELIKSVPPQQAAPEAASGFVRDLGLAAEKLAFSFRPPEV 240 K A PS+ + A VGEL+ P Q G V DL LAA + V Sbjct: 138 KAAYPSSVLMNAIPAKVAGVGELVMVTPTPQ-------GEVNDLVLAAAAIC---EVDRV 187 Query: 241 VRLAGSHAAGAV 276 + G+ A GA+ Sbjct: 188 FTIGGAQAVGAL 199 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,829,856 Number of Sequences: 219361 Number of extensions: 875596 Number of successful extensions: 4422 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 3567 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4411 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
