Clone Name | bastl32g11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC100511.12| Mus musculus chromosome 3, clone RP23-144N19, complete sequence Length = 200790 Score = 44.1 bits (22), Expect = 0.086 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 caactcacccgacagagagtgg 38 |||||||||||||||||||||| Sbjct: 74678 caactcacccgacagagagtgg 74657
>dbj|AK084550.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330014D22 product:unclassifiable, full insert sequence Length = 2841 Score = 44.1 bits (22), Expect = 0.086 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 caactcacccgacagagagtgg 38 |||||||||||||||||||||| Sbjct: 1940 caactcacccgacagagagtgg 1961
>gb|AC115750.9| Mus musculus chromosome 10, clone RP23-16F5, complete sequence Length = 228071 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gacagagagtggggaacaga 46 |||||||||||||||||||| Sbjct: 200768 gacagagagtggggaacaga 200787
>gb|AC159911.7| Mus musculus 10 BAC RP23-465M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203420 Score = 40.1 bits (20), Expect = 1.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gacagagagtggggaacaga 46 |||||||||||||||||||| Sbjct: 7468 gacagagagtggggaacaga 7487
>emb|CT027887.1| Xenopus tropicalis finished cDNA, clone TEgg002d18 Length = 2456 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 tcttccccttcgtctctct 84 ||||||||||||||||||| Sbjct: 1326 tcttccccttcgtctctct 1308
>gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosome 17, complete sequence Length = 190411 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 agtggggaacagaaagccc 52 ||||||||||||||||||| Sbjct: 185053 agtggggaacagaaagccc 185071
>gb|AC120194.6| Homo sapiens chromosome 8, clone RP11-110M13, complete sequence Length = 153726 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 gggaacagaaagccctagt 56 ||||||||||||||||||| Sbjct: 132163 gggaacagaaagccctagt 132145
>gb|AC022731.4|AC022731 Homo sapiens chromosome 8, clone RP11-382J12, complete sequence Length = 163997 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 gggaacagaaagccctagt 56 ||||||||||||||||||| Sbjct: 17587 gggaacagaaagccctagt 17569
>dbj|AK043593.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830011E02 product:unclassifiable, full insert sequence Length = 3107 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 34 agtggggaacagaaagccc 52 ||||||||||||||||||| Sbjct: 241 agtggggaacagaaagccc 223
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 57 cttccacgctcttccccttcgtc 79 ||||| ||||||||||||||||| Sbjct: 5991818 cttccccgctcttccccttcgtc 5991840
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 cttccacgctcttccccttcgtc 79 ||||| ||||||||||||||||| Sbjct: 12425418 cttccccgctcttccccttcgtc 12425396
>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0705A04 Length = 182468 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 cttccacgctcttccccttcgtc 79 ||||| ||||||||||||||||| Sbjct: 105555 cttccccgctcttccccttcgtc 105533
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 38.2 bits (19), Expect = 5.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 57 cttccacgctcttccccttcgtc 79 ||||| ||||||||||||||||| Sbjct: 46988 cttccccgctcttccccttcgtc 47010
>gb|AC154769.2| Mus musculus BAC clone RP24-447K12 from 17, complete sequence Length = 157247 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 34 agtggggaacagaaagccc 52 ||||||||||||||||||| Sbjct: 121737 agtggggaacagaaagccc 121719
>emb|AL161851.4|CNS01RHM Human chromosome 14 DNA sequence BAC R-1078I14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187732 Score = 38.2 bits (19), Expect = 5.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 acagaaagccctagtcttc 60 ||||||||||||||||||| Sbjct: 32223 acagaaagccctagtcttc 32241 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 606,834 Number of Sequences: 3902068 Number of extensions: 606834 Number of successful extensions: 44179 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44119 Number of HSP's gapped (non-prelim): 60 length of query: 116 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 95 effective length of database: 17,151,101,840 effective search space: 1629354674800 effective search space used: 1629354674800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)