Clone Name | bastl32g10 |
---|---|
Clone Library Name | barley_pub |
>gb|BT016257.1| Zea mays clone Contig90 mRNA sequence Length = 1558 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 tccttcccctcctcgtcctcg 189 ||||||||||||||||||||| Sbjct: 38 tccttcccctcctcgtcctcg 58
>ref|XM_755545.1| Ustilago maydis 521 hypothetical protein (UM04491.1) partial mRNA Length = 2244 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 ctcgtcctcgcggcagccgga 200 ||||||||||||||||||||| Sbjct: 1339 ctcgtcctcgcggcagccgga 1359
>ref|XM_503213.1| Yarrowia lipolytica CLIB122, YALI0D23969g predicted mRNA Length = 4614 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 cccctcctcgtcctcgcggca 194 ||||||||||||||||||||| Sbjct: 50 cccctcctcgtcctcgcggca 70
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcgcgcggcggcctgcacctc 87 ||||||||||||||||||||| Sbjct: 1487495 tcgcgcggcggcctgcacctc 1487515
>gb|U95180.1|ZMU95180 Zea mays endosperm specific protein mRNA, complete cds Length = 1547 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 tccttcccctcctcgtcctcg 189 ||||||||||||||||||||| Sbjct: 55 tccttcccctcctcgtcctcg 75
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 cccctcctcgtcctcgcggca 194 ||||||||||||||||||||| Sbjct: 3134904 cccctcctcgtcctcgcggca 3134924
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccgtgccgactccgcctcca 118 |||||||||||||||||||| Sbjct: 408470 ccgtgccgactccgcctcca 408489
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 cctcctcgtcctcgcggcagccgg 199 |||||||||||||||| ||||||| Sbjct: 1939755 cctcctcgtcctcgcgccagccgg 1939732
>gb|DQ115826.1| Cyanobacteria phage AS-1 contig_19 genomic sequence Length = 1552 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 catccgcggccgtgccgact 109 |||||||||||||||||||| Sbjct: 1484 catccgcggccgtgccgact 1465
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tccggtgcgtcgcgcggcgg 77 |||||||||||||||||||| Sbjct: 7689530 tccggtgcgtcgcgcggcgg 7689549
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 cggcggcctgcacctccacatccgcggc 99 |||||||||||||||| || |||||||| Sbjct: 858186 cggcggcctgcacctcgacctccgcggc 858159
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tccggtgcgtcgcgcggcgg 77 |||||||||||||||||||| Sbjct: 25795 tccggtgcgtcgcgcggcgg 25814
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cccctcctcgtcctcgcggc 193 |||||||||||||||||||| Sbjct: 4710064 cccctcctcgtcctcgcggc 4710083 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,043,051 Number of Sequences: 3902068 Number of extensions: 1043051 Number of successful extensions: 24773 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24526 Number of HSP's gapped (non-prelim): 247 length of query: 296 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 274 effective length of database: 17,147,199,772 effective search space: 4698332737528 effective search space used: 4698332737528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)