ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl32g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and... 48 0.024
2ref|NM_004638.2| Homo sapiens HLA-B associated transcript 2 (BAT... 48 0.024
3ref|NM_080686.1| Homo sapiens HLA-B associated transcript 2 (BAT... 48 0.024
4gb|AC073089.5| Homo sapiens BAC clone RP11-324F21 from 7, comple... 48 0.024
5emb|BX511262.7| Human DNA sequence from clone DASS-336N12 on chr... 48 0.024
6emb|AL805934.3| Human DNA sequence from clone DAQB-195H10 on chr... 48 0.024
7emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on ch... 48 0.024
8emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chr... 48 0.024
9emb|CR759761.9| Human DNA sequence from clone DAMC-157M7 on chro... 48 0.024
10emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chrom... 48 0.024
11emb|CR749245.1| Homo sapiens mRNA; cDNA DKFZp686D09175 (from clo... 48 0.024
12gb|BC030127.1| Homo sapiens, Similar to HLA-B associated transcr... 48 0.024
13emb|CR354443.4| Human DNA sequence from clone DAMA-236L13 on chr... 48 0.024
14dbj|AB210034.1| Homo sapiens mRNA for C6orf21 variant protein, p... 48 0.024
15dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 48 0.024
16gb|BC060668.1| Homo sapiens HLA-B associated transcript 2, trans... 48 0.024
17gb|M33518.1|HUMBAT2B4 Human HLA-B-associated transcript 2 (BAT2)... 48 0.024
18gb|M33509.1|HUMBAT2A Human HLA-B-associated transcript 2 (BAT2) ... 48 0.024
19gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cance... 46 0.096
20gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer... 46 0.096
21gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, com... 42 1.5
22ref|XM_479010.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
23gb|AC117686.10| Mus musculus chromosome 16, clone RP23-440B15, c... 42 1.5
24gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosom... 42 1.5
25emb|AL683842.11| Human DNA sequence from clone RP11-47G11 on chr... 42 1.5
26emb|X03031.1|HSPHOSR1 Human mRNA 3'-fragment for glycogen phosph... 42 1.5
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
28gb|AC104259.14| Homo sapiens chromosome 15, clone CTD-2525I4, co... 42 1.5
29dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
30dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
31emb|CR956418.10| Pig DNA sequence from clone PigE-219P24 on chro... 42 1.5
32gb|AY838899.1| Oryza sativa (japonica cultivar-group) 9-cis-epox... 40 5.9
33gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, co... 40 5.9
34gb|AC100212.8| Mus musculus chromosome 18, clone RP23-60D22, com... 40 5.9
35gb|AC166779.3| Mus musculus chromosome 18, clone RP23-399N10, co... 40 5.9
36gb|BC042295.1| Homo sapiens HLA-B associated transcript 2, mRNA ... 40 5.9
37emb|AL445192.3| Human DNA sequence from clone RP11-269H4 on chro... 40 5.9
38emb|AL353754.10| Human DNA sequence from clone RP11-401E9 on chr... 40 5.9
39gb|AC022015.6| Homo sapiens chromosome 10 clone RP11-153O5, comp... 40 5.9
40emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0... 40 5.9
41gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 5.9
42gb|DQ393277.1| Oryza sativa cultivar Yundao32 leafy head 2 gene,... 40 5.9
43dbj|AB179062.1| Macaca fascicularis testis cDNA clone: QtsA-1239... 40 5.9
44gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.9
45gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.9
46dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
47dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
49dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 5.9
50dbj|AP005805.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
51dbj|AK068396.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
52emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-9... 40 5.9
53gb|AC111036.6| Mus musculus chromosome 18, clone RP24-80E15, com... 40 5.9
54emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2... 40 5.9
55emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4,... 40 5.9 
>gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and CLIC1, DDAH, G6b, G6c, G5b,
              G6d, G6e, G6f, BAT5, G5b, CSK2B, BAT4, G4, Apo M, BAT3,
              BAT2, AIF-1, 1C7, LST-1, LTB, TNF, and LTA genes, complete
              cds
          Length = 184666

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 22     tcacttcccctcctcccccttccc 45
              ||||||||||||||||||||||||
Sbjct: 112386 tcacttcccctcctcccccttccc 112363
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>ref|NM_004638.2| Homo sapiens HLA-B associated transcript 2 (BAT2), transcript variant
            2, mRNA
          Length = 6714

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            ||||||||||||||||||||||||
Sbjct: 6639 tcacttcccctcctcccccttccc 6662
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>ref|NM_080686.1| Homo sapiens HLA-B associated transcript 2 (BAT2), transcript variant
            1, mRNA
          Length = 6750

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            ||||||||||||||||||||||||
Sbjct: 6675 tcacttcccctcctcccccttccc 6698
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>gb|AC073089.5| Homo sapiens BAC clone RP11-324F21 from 7, complete sequence
          Length = 171788

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             ||||||||||||||||||||||||
Sbjct: 24432 tcacttcccctcctcccccttccc 24409
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>emb|BX511262.7| Human DNA sequence from clone DASS-336N12 on chromosome 6, complete
             sequence
          Length = 69009

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             ||||||||||||||||||||||||
Sbjct: 17235 tcacttcccctcctcccccttccc 17258
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>emb|AL805934.3| Human DNA sequence from clone DAQB-195H10 on chromosome 6 Contains the
             AIF1 gene for allograft inflammatory factor 1, the BAT2
             genes for HLA-B associated transcript 2, the BAT3 gene for
             HLA-B associated transcript 3, the APOM gene for
             apolipoprotein M, the C6orf47 gene for chromosome 6 open
             reading frame 47, the BAT4 gene for HLA-B associated
             transcript 4, the CSNK2B gene for casein kinase 2, beta
             polypeptide, the LY6G5B gene for lymphocyte antigen 6
             complex, locus G5B, the bQB195H10.12 gene for a novel
             protein, the LY6G5C gene for lymphocyte antigen 6 complex,
             locus G5C, the BAT5 gene for HLA-B associated transcript
             5, the 5' end for LY6G6D gene for lymphocyte antigen 6
             complex, locus G6D and 7 CpG islands, complete sequence
          Length = 99109

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             ||||||||||||||||||||||||
Sbjct: 26157 tcacttcccctcctcccccttccc 26180
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>emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on chromosome 6 contains a
              ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene for
              HLA-B associated transcript 1, the ATP6V1G gene for ATPase,
              H+ transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1
              gene for nuclear factor of kappa light polypeptide gene
              enhancer in B-cells inhibitor-like 1, the LTA gene for
              lymphotoxin alpha, the TNF gene for tumour necrosis factor,
              the LTB gene for lymphotoxin beta, the LST1 gene for
              leukocyte specific transcript 1, the LY117 gene for
              lymphocyte antigen 117, the AIF1 gene for alograft
              imflammatory factor 1, the BAT2 gene for HLA-B associated
              transcript 2, the BAT3 gene for HLA-B associated transcript
              3, the APOM gene for apolipoprotein M, the 3' end of the
              gene for chromosome 6, open reading frame 47 and four CpG
              islands, complete sequence
          Length = 132330

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 22     tcacttcccctcctcccccttccc 45
              ||||||||||||||||||||||||
Sbjct: 110356 tcacttcccctcctcccccttccc 110379
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>emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chromosome 6 contains the
              gene for a novel protein similar to similar to
              peptidyl-prolyl cis-trans isomerase A (PPIase), a ribosomal
              protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B
              associated transcript 1, the ATP6V1G gene for ATPase, H+
              transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1
              gene for nuclear factor of kappa light polypeptide gene
              enhancer in B-cells inhibitor-like 1, the LTA gene for
              lymphotoxin alpha, the TNF gene for tumour necrosis factor,
              the LTB gene for lymphotoxin beta, the LST1 gene for
              leukocyte specific transcript 1, the LY117 gene for
              lymphocyte antigen 117, the AIF1 gene for  alograft
              imflammatory factor 1, the BAT2 gene for HLA-B associated
              transcript 2, the 3' end of the BAT3 gene for HLA-B
              associated transcript 3 and two CpG islands, complete
              sequence
          Length = 135784

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 22     tcacttcccctcctcccccttccc 45
              ||||||||||||||||||||||||
Sbjct: 124122 tcacttcccctcctcccccttccc 124145
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>emb|CR759761.9| Human DNA sequence from clone DAMC-157M7 on chromosome 6, complete
             sequence
          Length = 83849

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             ||||||||||||||||||||||||
Sbjct: 26151 tcacttcccctcctcccccttccc 26174
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>emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chromosome 6, complete
             sequence
          Length = 101422

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             ||||||||||||||||||||||||
Sbjct: 94568 tcacttcccctcctcccccttccc 94591
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>emb|CR749245.1| Homo sapiens mRNA; cDNA DKFZp686D09175 (from clone DKFZp686D09175)
          Length = 4057

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            ||||||||||||||||||||||||
Sbjct: 3964 tcacttcccctcctcccccttccc 3987
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>gb|BC030127.1| Homo sapiens, Similar to HLA-B associated transcript 2, clone
            IMAGE:3345434, mRNA, partial cds
          Length = 2318

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            ||||||||||||||||||||||||
Sbjct: 2190 tcacttcccctcctcccccttccc 2213
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>emb|CR354443.4| Human DNA sequence from clone DAMA-236L13 on chromosome 6, complete
             sequence
          Length = 132551

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             ||||||||||||||||||||||||
Sbjct: 18790 tcacttcccctcctcccccttccc 18813
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>dbj|AB210034.1| Homo sapiens mRNA for C6orf21 variant protein, partial cds, clone:
            hj06729
          Length = 5011

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            ||||||||||||||||||||||||
Sbjct: 4936 tcacttcccctcctcccccttccc 4959
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>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 22     tcacttcccctcctcccccttccc 45
              ||||||||||||||||||||||||
Sbjct: 306341 tcacttcccctcctcccccttccc 306318
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>gb|BC060668.1| Homo sapiens HLA-B associated transcript 2, transcript variant 1,
            mRNA (cDNA clone MGC:57530 IMAGE:6471026), complete cds
          Length = 6812

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            ||||||||||||||||||||||||
Sbjct: 6746 tcacttcccctcctcccccttccc 6769
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>gb|M33518.1|HUMBAT2B4 Human HLA-B-associated transcript 2 (BAT2) gene, 3' end
          Length = 6349

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            ||||||||||||||||||||||||
Sbjct: 6274 tcacttcccctcctcccccttccc 6297
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>gb|M33509.1|HUMBAT2A Human HLA-B-associated transcript 2 (BAT2) mRNA, complete cds
          Length = 6704

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            ||||||||||||||||||||||||
Sbjct: 6629 tcacttcccctcctcccccttccc 6652
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>gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 163461

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 23    cacttcccctcctcccccttccc 45
             |||||||||||||||||||||||
Sbjct: 10342 cacttcccctcctcccccttccc 10320
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>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 208921

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 23    cacttcccctcctcccccttccc 45
             |||||||||||||||||||||||
Sbjct: 34825 cacttcccctcctcccccttccc 34847
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>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence
          Length = 186903

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    cttcccctcctcccccttccc 45
             |||||||||||||||||||||
Sbjct: 44940 cttcccctcctcccccttccc 44960
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>ref|XM_479010.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 735

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 27  tcccctcctcccccttcccga 47
           |||||||||||||||||||||
Sbjct: 397 tcccctcctcccccttcccga 377
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>gb|AC117686.10| Mus musculus chromosome 16, clone RP23-440B15, complete sequence
          Length = 210851

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   aaagaaccccaagaaacaaac 205
             |||||||||||||||||||||
Sbjct: 76415 aaagaaccccaagaaacaaac 76395
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>gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosome 7, complete sequence
          Length = 176244

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 25     cttcccctcctcccccttccc 45
              |||||||||||||||||||||
Sbjct: 161545 cttcccctcctcccccttccc 161565
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>emb|AL683842.11| Human DNA sequence from clone RP11-47G11 on chromosome 10 Contains the
              gene for B cell RAG associated protein (GALNAC4S-6ST)
              (BRAG, KIAA0598), a novel pseudogene and three CpG islands,
              complete sequence
          Length = 149244

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 25     cttcccctcctcccccttccc 45
              |||||||||||||||||||||
Sbjct: 138064 cttcccctcctcccccttccc 138044
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>emb|X03031.1|HSPHOSR1 Human mRNA 3'-fragment for glycogen phosphorylase (aa 673-840)
          Length = 766

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 407 gcatgcgggtggaggatgtcg 427
           |||||||||||||||||||||
Sbjct: 115 gcatgcgggtggaggatgtcg 135
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 27       tcccctcctcccccttcccga 47
                |||||||||||||||||||||
Sbjct: 24302765 tcccctcctcccccttcccga 24302745
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>gb|AC104259.14| Homo sapiens chromosome 15, clone CTD-2525I4, complete sequence
          Length = 155753

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 25    cttcccctcctcccccttccc 45
             |||||||||||||||||||||
Sbjct: 56648 cttcccctcctcccccttccc 56628
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>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1579_C03
          Length = 122851

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    tcccctcctcccccttcccga 47
             |||||||||||||||||||||
Sbjct: 35958 tcccctcctcccccttcccga 35938
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>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0453E05
          Length = 137364

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     tcccctcctcccccttcccga 47
              |||||||||||||||||||||
Sbjct: 114316 tcccctcctcccccttcccga 114296
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>emb|CR956418.10| Pig DNA sequence from clone PigE-219P24 on chromosome 6, complete
             sequence
          Length = 173652

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    cttcccctcctcccccttccc 45
             |||||||||||||||||||||
Sbjct: 20797 cttcccctcctcccccttccc 20817
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>gb|AY838899.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid
           dioxygenase 3 (NCED3) mRNA, complete cds
          Length = 2060

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  cttcccctcctcccccttcc 44
           ||||||||||||||||||||
Sbjct: 431 cttcccctcctcccccttcc 412
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>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence
          Length = 355714

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     cccctcctcccccttcccga 47
              ||||||||||||||||||||
Sbjct: 333609 cccctcctcccccttcccga 333628
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>gb|AC100212.8| Mus musculus chromosome 18, clone RP23-60D22, complete sequence
          Length = 225698

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    cttcccctcctcccccttcc 44
             ||||||||||||||||||||
Sbjct: 86156 cttcccctcctcccccttcc 86175
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>gb|AC166779.3| Mus musculus chromosome 18, clone RP23-399N10, complete sequence
          Length = 200851

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     tcacttcccctcctcccccttccc 45
              ||||||||||||||| ||||||||
Sbjct: 125616 tcacttcccctcctctcccttccc 125639
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>gb|BC042295.1| Homo sapiens HLA-B associated transcript 2, mRNA (cDNA clone
            IMAGE:5555847), containing frame-shift errors
          Length = 6914

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   ttcccctcctcccccttccc 45
            ||||||||||||||||||||
Sbjct: 6789 ttcccctcctcccccttccc 6808
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>emb|AL445192.3| Human DNA sequence from clone RP11-269H4 on chromosome 20 Contains the
             3' end of the gene for P-Rex1 protein (KIAA1415, PREX1),
             complete sequence
          Length = 75954

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    aaatcacttcccctcctccc 38
             ||||||||||||||||||||
Sbjct: 43489 aaatcacttcccctcctccc 43470
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>emb|AL353754.10| Human DNA sequence from clone RP11-401E9 on chromosome 10 Contains the
             3' end of the ATP5C1 gene for ATP synthase H+ transporting
             mitochondrial F1 complex gamma polypeptide 1, the 5' end
             of the TAF3 gene for TAF3 RNA polymerase II, TATA box
             binding protein (TBP)-associated factor, 140kDa
             (TAF140,TAFII140), a mitochondrial ribosomal protein L13
             (MRPL13) pseudogene and a CpG island, complete sequence
          Length = 173316

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             ||||||||| ||||||||||||||
Sbjct: 40850 tcacttcccttcctcccccttccc 40873
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>gb|AC022015.6| Homo sapiens chromosome 10 clone RP11-153O5, complete sequence
          Length = 135198

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ttcccctcctcccccttccc 45
              ||||||||||||||||||||
Sbjct: 105353 ttcccctcctcccccttccc 105372
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>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 183327

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     cttcccctcctcccccttcc 44
              ||||||||||||||||||||
Sbjct: 143232 cttcccctcctcccccttcc 143213
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 344     gctccatcgtcgccggcagc 363
               ||||||||||||||||||||
Sbjct: 3902349 gctccatcgtcgccggcagc 3902330
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>gb|DQ393277.1| Oryza sativa cultivar Yundao32 leafy head 2 gene, complete cds
          Length = 3946

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 342 cggctccatcgtcgccggcagcagcggc 369
           |||| ||||||||||||||||| |||||
Sbjct: 352 cggcgccatcgtcgccggcagcggcggc 325
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>dbj|AB179062.1| Macaca fascicularis testis cDNA clone: QtsA-12393, similar to human
            HLA-B associated transcript 2 (BAT2), transcript
            variant2, mRNA, RefSeq: NM_004638.2
          Length = 2980

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            |||||||||||||| |||||||||
Sbjct: 2884 tcacttcccctccttccccttccc 2907
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    ttcgcggtcgatgcgatcgc 265
              ||||||||||||||||||||
Sbjct: 967025 ttcgcggtcgatgcgatcgc 967006
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>gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex BAC MMU218K02, complete
             sequence
          Length = 182826

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             |||||||||||||| |||||||||
Sbjct: 72749 tcacttcccctccttccccttccc 72772
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 52       gcggcctcctcgcccctccggcga 75
                |||||||||||||||| |||||||
Sbjct: 21809810 gcggcctcctcgccccgccggcga 21809787
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 137      cccacctctctcgtcttccg 156
                ||||||||||||||||||||
Sbjct: 11806035 cccacctctctcgtcttccg 11806016
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 25       cttcccctcctcccccttcc 44
                ||||||||||||||||||||
Sbjct: 24764543 cttcccctcctcccccttcc 24764524
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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 22   tcacttcccctcctcccccttccc 45
            |||||||||||||| |||||||||
Sbjct: 5302 tcacttcccctccttccccttccc 5279
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>dbj|AP005805.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0006M19
          Length = 144073

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   cccacctctctcgtcttccg 156
             ||||||||||||||||||||
Sbjct: 73970 cccacctctctcgtcttccg 73951
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>dbj|AK068396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149D19, full
           insert sequence
          Length = 1648

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 52  gcggcctcctcgcccctccggcga 75
           |||||||||||||||| |||||||
Sbjct: 160 gcggcctcctcgccccgccggcga 183
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>emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-998D10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 203363

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   aaagaaccccaagaaacaaa 204
             ||||||||||||||||||||
Sbjct: 81579 aaagaaccccaagaaacaaa 81560
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>gb|AC111036.6| Mus musculus chromosome 18, clone RP24-80E15, complete sequence
          Length = 216052

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    tcacttcccctcctcccccttccc 45
             ||||||||||||||| ||||||||
Sbjct: 96522 tcacttcccctcctctcccttccc 96499
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>emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2552B11 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   aaagaaccccaagaaacaaa 204
             ||||||||||||||||||||
Sbjct: 18399 aaagaaccccaagaaacaaa 18380
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>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20,
              complete sequence
          Length = 141915

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     gcggcctcctcgcccctccggcga 75
              |||||||||||||||| |||||||
Sbjct: 121427 gcggcctcctcgccccgccggcga 121404


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,879,238
Number of Sequences: 3902068
Number of extensions: 2879238
Number of successful extensions: 64651
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64232
Number of HSP's gapped (non-prelim): 419
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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