ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl32g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550320.1| Oryza sativa (japonica cultivar-group), mRNA 440 e-120
2dbj|AK103230.1| Oryza sativa (japonica cultivar-group) cDNA clon... 440 e-120
3gb|AY105079.1| Zea mays PCO107820 mRNA sequence 377 e-101
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
5dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
6emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4,... 133 6e-28
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
8ref|XM_470996.1| Oryza sativa (japonica cultivar-group), predic... 101 2e-18
9emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
10gb|AF165214.1|AF165214 Bacteriophage D3, complete genome 42 1.6
11dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 42 1.6
12dbj|AK121934.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
13ref|NM_197601.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.3
14ref|XM_469431.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
15gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
16gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.3
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.3
18gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 40 6.3
19gb|AC101737.6| Mus musculus chromosome 1, clone RP23-471L1, comp... 40 6.3
20ref|XM_387351.1| Gibberella zeae PH-1 chromosome 4 conserved hyp... 40 6.3
21emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.3
22emb|CR861453.1| Pongo pygmaeus mRNA; cDNA DKFZp459D032 (from clo... 40 6.3
23gb|AF003139.2| Caenorhabditis elegans cosmid F53G12, complete se... 40 6.3
24gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complet... 40 6.3
25gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 geno... 40 6.3
26dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
27dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
28gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.3
29gb|AC023471.4|AC023471 Homo sapiens chromosome 3 clone RP11-126L... 40 6.3
30gb|AC018818.5|AC018818 Homo sapiens chromosome 3 clone RP11-266E... 40 6.3
31ref|NM_208320.1| Eremothecium gossypii ABR021Wp (ABR021W), mRNA 40 6.3
32gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
33gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.3
34gb|AC027128.5| Homo sapiens chromosome 3 clone RP11-627C1 map 3p... 40 6.3
35gb|AC018495.5| Homo sapiens chromosome 3 clone RP11-193K15 map 3... 40 6.3 
>ref|XM_550320.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2910

 Score =  440 bits (222), Expect = e-120
 Identities = 341/380 (89%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                       
Query: 66  ctccgccgtcgtccgccgcgggccgcggccatggatctcctccgcgcgaacctccacaag 125
           |||||||| || ||| ||| | ||||||||||||||||||||||| || |||||||||||
Sbjct: 96  ctccgccgccgcccggcgccgcccgcggccatggatctcctccgctcgcacctccacaag 155

                                                                       
Query: 126 gtccgcatcccggagcccaccaaccgcatccacaaggacgagtgctgcgtctccttcgac 185
           ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||
Sbjct: 156 gtccgcatcccggagcccggcagccgcatccacaaggacgagtgctgcgtctccttcgac 215

                                                                       
Query: 186 accccgaggtcggagggcgggctgtacgtggacatgaactcgttcctggggttcgggagg 245
           ||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 216 accccgaggtcggagggtgggctgtacgtcgacatgacctcgttcctggggttcgggagg 275

                                                                       
Query: 246 gagcacgtcgcgtggaacttcgagaagtcggagaaccccgtgtacctccacatcgtgcag 305
           |||||||| |||||||||| |||||||   | ||||||||||||||||||||||||||||
Sbjct: 276 gagcacgtggcgtggaactacgagaagagtgggaaccccgtgtacctccacatcgtgcag 335

                                                                       
Query: 306 cgccggaagccggagcc---ggacgagacagatcgcccgctgaagaagccaaccctgctc 362
           |||||||||||||||||    |||||| | |||||||||||||||||||| || || |||
Sbjct: 336 cgccggaagccggagcccgacgacgaggcggatcgcccgctgaagaagcccacgctactc 395

                                                                       
Query: 363 gccatcggcgtggagggaggttttggtgaacaagaacctgaatacgatgtgacttatgaa 422
           |||||||| ||||||||||||||   ||| |||||||| |||||||||| | ||| ||||
Sbjct: 396 gccatcggagtggagggaggtttcactgatcaagaacccgaatacgatgaggcttttgaa 455

                               
Query: 423 atcgttattttgcctgaatt 442
           || ||||| |||||||||||
Sbjct: 456 attgttatcttgcctgaatt 475



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 ctcgtcgcctcgccgtctcc 34
          ||||||||||||||||||||
Sbjct: 40 ctcgtcgcctcgccgtctcc 59
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>dbj|AK103230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123D13, full
           insert sequence
          Length = 2910

 Score =  440 bits (222), Expect = e-120
 Identities = 341/380 (89%), Gaps = 3/380 (0%)
 Strand = Plus / Plus

                                                                       
Query: 66  ctccgccgtcgtccgccgcgggccgcggccatggatctcctccgcgcgaacctccacaag 125
           |||||||| || ||| ||| | ||||||||||||||||||||||| || |||||||||||
Sbjct: 96  ctccgccgccgcccggcgccgcccgcggccatggatctcctccgctcgcacctccacaag 155

                                                                       
Query: 126 gtccgcatcccggagcccaccaaccgcatccacaaggacgagtgctgcgtctccttcgac 185
           ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||
Sbjct: 156 gtccgcatcccggagcccggcagccgcatccacaaggacgagtgctgcgtctccttcgac 215

                                                                       
Query: 186 accccgaggtcggagggcgggctgtacgtggacatgaactcgttcctggggttcgggagg 245
           ||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 216 accccgaggtcggagggtgggctgtacgtcgacatgacctcgttcctggggttcgggagg 275

                                                                       
Query: 246 gagcacgtcgcgtggaacttcgagaagtcggagaaccccgtgtacctccacatcgtgcag 305
           |||||||| |||||||||| |||||||   | ||||||||||||||||||||||||||||
Sbjct: 276 gagcacgtggcgtggaactacgagaagagtgggaaccccgtgtacctccacatcgtgcag 335

                                                                       
Query: 306 cgccggaagccggagcc---ggacgagacagatcgcccgctgaagaagccaaccctgctc 362
           |||||||||||||||||    |||||| | |||||||||||||||||||| || || |||
Sbjct: 336 cgccggaagccggagcccgacgacgaggcggatcgcccgctgaagaagcccacgctactc 395

                                                                       
Query: 363 gccatcggcgtggagggaggttttggtgaacaagaacctgaatacgatgtgacttatgaa 422
           |||||||| ||||||||||||||   ||| |||||||| |||||||||| | ||| ||||
Sbjct: 396 gccatcggagtggagggaggtttcactgatcaagaacccgaatacgatgaggcttttgaa 455

                               
Query: 423 atcgttattttgcctgaatt 442
           || ||||| |||||||||||
Sbjct: 456 attgttatcttgcctgaatt 475



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 ctcgtcgcctcgccgtctcc 34
          ||||||||||||||||||||
Sbjct: 40 ctcgtcgcctcgccgtctcc 59
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>gb|AY105079.1| Zea mays PCO107820 mRNA sequence
          Length = 2648

 Score =  377 bits (190), Expect = e-101
 Identities = 307/346 (88%)
 Strand = Plus / Plus

                                                                       
Query: 79  cgccgcgggccgcggccatggatctcctccgcgcgaacctccacaaggtccgcatcccgg 138
           |||||| | |||||| |||||||||||| ||| |  | |||||||||||||| ||||| |
Sbjct: 38  cgccgccgcccgcggacatggatctccttcgctctcatctccacaaggtccggatccccg 97

                                                                       
Query: 139 agcccaccaaccgcatccacaaggacgagtgctgcgtctccttcgacaccccgaggtcgg 198
           |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 98  agccaaccaaccgcatccacaaggacgagtgctgcgtctccttcgacactccgaggtcag 157

                                                                       
Query: 199 agggcgggctgtacgtggacatgaactcgttcctggggttcgggagggagcacgtcgcgt 258
           |||| || |||||||||||||||  ||||||||||||||||||||||||| |||| | ||
Sbjct: 158 agggaggcctgtacgtggacatggtctcgttcctggggttcgggagggagtacgtggagt 217

                                                                       
Query: 259 ggaacttcgagaagtcggagaaccccgtgtacctccacatcgtgcagcgccggaagccgg 318
           |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 218 ggaacttcgagaagacggggaaccccgtgtacctccacatcgttcagcgccggaagccgg 277

                                                                       
Query: 319 agccggacgagacagatcgcccgctgaagaagccaaccctgctcgccatcggcgtggagg 378
           |||| |||||| | ||||||||||| |||||||| ||||| ||||| || || ||||| |
Sbjct: 278 agcccgacgaggcggatcgcccgcttaagaagcccaccctcctcgctataggtgtggaag 337

                                                         
Query: 379 gaggttttggtgaacaagaacctgaatacgatgtgacttatgaaat 424
           ||||||||||||| |||||||| ||||| ||||  |||| ||||||
Sbjct: 338 gaggttttggtgatcaagaaccagaatatgatgaaacttttgaaat 383
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  216 bits (109), Expect = 5e-53
 Identities = 165/183 (90%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                           
Query: 191     gaggtcggagggcgggctgtacgtggacatgaactcgttcctggggttcgggagggagca 250
               |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 3985964 gaggtcggagggtgggctgtacgtcgacatgacctcgttcctggggttcgggagggagca 3986023

                                                                           
Query: 251     cgtcgcgtggaacttcgagaagtcggagaaccccgtgtacctccacatcgtgcagcgccg 310
               ||| |||||||||| |||||||   | |||||||||||||||||||||||||||||||||
Sbjct: 3986024 cgtggcgtggaactacgagaagagtgggaaccccgtgtacctccacatcgtgcagcgccg 3986083

                                                                           
Query: 311     gaagccggagcc---ggacgagacagatcgcccgctgaagaagccaaccctgctcgccat 367
               ||||||||||||    |||||| | |||||||||||||||||||| || || ||||||||
Sbjct: 3986084 gaagccggagcccgacgacgaggcggatcgcccgctgaagaagcccacgctactcgccat 3986143

                  
Query: 368     cgg 370
               |||
Sbjct: 3986144 cgg 3986146



 Score =  170 bits (86), Expect = 3e-39
 Identities = 116/126 (92%)
 Strand = Plus / Plus

                                                                           
Query: 66      ctccgccgtcgtccgccgcgggccgcggccatggatctcctccgcgcgaacctccacaag 125
               |||||||| || ||| ||| | ||||||||||||||||||||||| || |||||||||||
Sbjct: 3985741 ctccgccgccgcccggcgccgcccgcggccatggatctcctccgctcgcacctccacaag 3985800

                                                                           
Query: 126     gtccgcatcccggagcccaccaaccgcatccacaaggacgagtgctgcgtctccttcgac 185
               ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||
Sbjct: 3985801 gtccgcatcccggagcccggcagccgcatccacaaggacgagtgctgcgtctccttcgac 3985860

                     
Query: 186     accccg 191
               ||||||
Sbjct: 3985861 accccg 3985866



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                           
Query: 372     gtggagggaggttttggtgaacaagaacctgaatacgatgtgacttatgaaatcgttatt 431
               ||||||||||||||   ||| |||||||| |||||||||| | ||| |||||| ||||| 
Sbjct: 3986670 gtggagggaggtttcactgatcaagaacccgaatacgatgaggcttttgaaattgttatc 3986729

                          
Query: 432     ttgcctgaatt 442
               |||||||||||
Sbjct: 3986730 ttgcctgaatt 3986740



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 15      ctcgtcgcctcgccgtctcc 34
               ||||||||||||||||||||
Sbjct: 3985685 ctcgtcgcctcgccgtctcc 3985704
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>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0013F10
          Length = 163095

 Score =  216 bits (109), Expect = 5e-53
 Identities = 165/183 (90%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                          
Query: 191    gaggtcggagggcgggctgtacgtggacatgaactcgttcctggggttcgggagggagca 250
              |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 107868 gaggtcggagggtgggctgtacgtcgacatgacctcgttcctggggttcgggagggagca 107927

                                                                          
Query: 251    cgtcgcgtggaacttcgagaagtcggagaaccccgtgtacctccacatcgtgcagcgccg 310
              ||| |||||||||| |||||||   | |||||||||||||||||||||||||||||||||
Sbjct: 107928 cgtggcgtggaactacgagaagagtgggaaccccgtgtacctccacatcgtgcagcgccg 107987

                                                                          
Query: 311    gaagccggagcc---ggacgagacagatcgcccgctgaagaagccaaccctgctcgccat 367
              ||||||||||||    |||||| | |||||||||||||||||||| || || ||||||||
Sbjct: 107988 gaagccggagcccgacgacgaggcggatcgcccgctgaagaagcccacgctactcgccat 108047

                 
Query: 368    cgg 370
              |||
Sbjct: 108048 cgg 108050



 Score =  170 bits (86), Expect = 3e-39
 Identities = 116/126 (92%)
 Strand = Plus / Plus

                                                                          
Query: 66     ctccgccgtcgtccgccgcgggccgcggccatggatctcctccgcgcgaacctccacaag 125
              |||||||| || ||| ||| | ||||||||||||||||||||||| || |||||||||||
Sbjct: 107645 ctccgccgccgcccggcgccgcccgcggccatggatctcctccgctcgcacctccacaag 107704

                                                                          
Query: 126    gtccgcatcccggagcccaccaaccgcatccacaaggacgagtgctgcgtctccttcgac 185
              ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||
Sbjct: 107705 gtccgcatcccggagcccggcagccgcatccacaaggacgagtgctgcgtctccttcgac 107764

                    
Query: 186    accccg 191
              ||||||
Sbjct: 107765 accccg 107770



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                          
Query: 372    gtggagggaggttttggtgaacaagaacctgaatacgatgtgacttatgaaatcgttatt 431
              ||||||||||||||   ||| |||||||| |||||||||| | ||| |||||| ||||| 
Sbjct: 108574 gtggagggaggtttcactgatcaagaacccgaatacgatgaggcttttgaaattgttatc 108633

                         
Query: 432    ttgcctgaatt 442
              |||||||||||
Sbjct: 108634 ttgcctgaatt 108644



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ctcgtcgcctcgccgtctcc 34
              ||||||||||||||||||||
Sbjct: 107589 ctcgtcgcctcgccgtctcc 107608
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>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06,
             complete sequence
          Length = 143730

 Score =  133 bits (67), Expect = 6e-28
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                         
Query: 93    gccatggatctcctccgcgcgaacctccacaaggtccgcatcccggagcccaccaaccgc 152
             |||||||||||||||||| || |||||||||||||| |||||| |||||||  || ||||
Sbjct: 26601 gccatggatctcctccgctcgcacctccacaaggtctgcatcctggagcccggcagccgc 26542

                                                    
Query: 153   atccacaaggacgagtgctgcgtctccttcgacaccccg 191
             ||||||||||||||||||| |||||||||||||||||||
Sbjct: 26541 atccacaaggacgagtgcttcgtctccttcgacaccccg 26503



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                
Query: 278   gaaccccgtgtacctccacatcgtgcagcgccggaagccggagccggacga 328
             |||||||||||||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 26355 gaaccccgtgtacctccacatcatgcagcgccgaaagccagagcccgacga 26305



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 195   tcggagggcgggctgtacgtggacatgaactcgttcctggggttcgggagg 245
             |||||||| |||||||| || ||||||| ||||||||| ||||||||||||
Sbjct: 26405 tcggagggtgggctgtatgtcgacatgacctcgttccttgggttcgggagg 26355



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 13    atctcgtcgcctcgccgtctcc 34
             ||||||||||||||||||||||
Sbjct: 26689 atctcgtcgcctcgccgtctcc 26668
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score =  133 bits (67), Expect = 6e-28
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                          
Query: 93     gccatggatctcctccgcgcgaacctccacaaggtccgcatcccggagcccaccaaccgc 152
              |||||||||||||||||| || |||||||||||||| |||||| |||||||  || ||||
Sbjct: 495633 gccatggatctcctccgctcgcacctccacaaggtctgcatcctggagcccggcagccgc 495574

                                                     
Query: 153    atccacaaggacgagtgctgcgtctccttcgacaccccg 191
              ||||||||||||||||||| |||||||||||||||||||
Sbjct: 495573 atccacaaggacgagtgcttcgtctccttcgacaccccg 495535



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 278    gaaccccgtgtacctccacatcgtgcagcgccggaagccggagccggacga 328
              |||||||||||||||||||||| |||||||||| ||||| ||||| |||||
Sbjct: 495387 gaaccccgtgtacctccacatcatgcagcgccgaaagccagagcccgacga 495337



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                 
Query: 195    tcggagggcgggctgtacgtggacatgaactcgttcctggggttcgggagg 245
              |||||||| |||||||| || ||||||| ||||||||| ||||||||||||
Sbjct: 495437 tcggagggtgggctgtatgtcgacatgacctcgttccttgggttcgggagg 495387



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 13     atctcgtcgcctcgccgtctcc 34
              ||||||||||||||||||||||
Sbjct: 495721 atctcgtcgcctcgccgtctcc 495700



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 229      tcctggggttcgggagggagc 249
                |||||||||||||||||||||
Sbjct: 26258170 tcctggggttcgggagggagc 26258150
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>ref|XM_470996.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1710

 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Minus

                                                                        
Query: 117  ctccacaaggtccgcatcccggagcccaccaaccgcatccacaaggacgagtgctgcgtc 176
            |||||||||||| |||||| |||||||  || ||||||||||||||||||||||| ||||
Sbjct: 1359 ctccacaaggtctgcatcctggagcccggcagccgcatccacaaggacgagtgcttcgtc 1300

                           
Query: 177  tccttcgacaccccg 191
            |||||||||||||||
Sbjct: 1299 tccttcgacaccccg 1285
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>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
             complete sequence
          Length = 141545

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   tcctggggttcgggagggagc 249
             |||||||||||||||||||||
Sbjct: 34747 tcctggggttcgggagggagc 34727
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>gb|AF165214.1|AF165214 Bacteriophage D3, complete genome
          Length = 56425

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 221   gaactcgttcctggggttcgg 241
             |||||||||||||||||||||
Sbjct: 50006 gaactcgttcctggggttcgg 50026
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 377     gggaggttttggtgaacaaga 397
               |||||||||||||||||||||
Sbjct: 2425127 gggaggttttggtgaacaaga 2425107
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>dbj|AK121934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A05, full
           insert sequence
          Length = 1145

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 229 tcctggggttcgggagggagc 249
           |||||||||||||||||||||
Sbjct: 73  tcctggggttcgggagggagc 53
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>ref|NM_197601.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0015I11.19), mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 168 tgctgcgtctccttcgacaccccg 191
           ||||||||| ||||||||||||||
Sbjct: 478 tgctgcgtcgccttcgacaccccg 501
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>ref|XM_469431.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 600

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  cgtcgtccgccgcgggccgc 91
           ||||||||||||||||||||
Sbjct: 529 cgtcgtccgccgcgggccgc 510
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>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    cgtcgtccgccgcgggccgc 91
             ||||||||||||||||||||
Sbjct: 65570 cgtcgtccgccgcgggccgc 65589
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     gtcgtccgccgcgggccgcg 92
              ||||||||||||||||||||
Sbjct: 270923 gtcgtccgccgcgggccgcg 270942
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       cgtcgtccgccgcgggccgc 91
                ||||||||||||||||||||
Sbjct: 27929842 cgtcgtccgccgcgggccgc 27929861
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>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    cgtcgtccgccgcgggccgc 91
             ||||||||||||||||||||
Sbjct: 95184 cgtcgtccgccgcgggccgc 95165
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>gb|AC101737.6| Mus musculus chromosome 1, clone RP23-471L1, complete sequence
          Length = 235405

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    tctccccacgcccccaaaacccta 53
             ||||||||| ||||||||||||||
Sbjct: 96709 tctccccacccccccaaaacccta 96732
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>ref|XM_387351.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein
            (FG07175.1) partial mRNA
          Length = 3315

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 261  aacttcgagaagtcggagaacccc 284
            |||||||||||||||||| |||||
Sbjct: 2785 aacttcgagaagtcggaggacccc 2808
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 73      gtcgtccgccgcgggccgcg 92
               ||||||||||||||||||||
Sbjct: 1596724 gtcgtccgccgcgggccgcg 1596743
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>emb|CR861453.1| Pongo pygmaeus mRNA; cDNA DKFZp459D032 (from clone DKFZp459D032)
          Length = 3180

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 154 tccacaaggacgagtgctgcgtctccttcgacaccccgaggtcggagggcgg 205
           ||||||| |||||||||  | ||||||||||||| |||  ||| ||||||||
Sbjct: 107 tccacaaagacgagtgcgccttctccttcgacacgccggagtctgagggcgg 158
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>gb|AF003139.2| Caenorhabditis elegans cosmid F53G12, complete sequence
          Length = 41553

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  tctcgtcgcctcgccgtctc 33
           ||||||||||||||||||||
Sbjct: 674 tctcgtcgcctcgccgtctc 655
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>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence
          Length = 240957

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    cccgctgaagaagccaaccc 357
              ||||||||||||||||||||
Sbjct: 134920 cccgctgaagaagccaaccc 134901
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>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete
              sequence
          Length = 138824

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 168    tgctgcgtctccttcgacaccccg 191
              ||||||||| ||||||||||||||
Sbjct: 111528 tgctgcgtcgccttcgacaccccg 111551
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 168      tgctgcgtctccttcgacaccccg 191
                ||||||||| ||||||||||||||
Sbjct: 20710076 tgctgcgtcgccttcgacaccccg 20710099
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       cgtcgtccgccgcgggccgc 91
                ||||||||||||||||||||
Sbjct: 28021166 cgtcgtccgccgcgggccgc 28021185
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 73      gtcgtccgccgcgggccgcggcca 96
               |||||||||||||||| |||||||
Sbjct: 1052597 gtcgtccgccgcgggcggcggcca 1052620
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>gb|AC023471.4|AC023471 Homo sapiens chromosome 3 clone RP11-126L9 map 3p, complete sequence
          Length = 192973

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    ctgaagaagccaaccctgct 361
              ||||||||||||||||||||
Sbjct: 118376 ctgaagaagccaaccctgct 118395
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>gb|AC018818.5|AC018818 Homo sapiens chromosome 3 clone RP11-266E23 map 3p, complete sequence
          Length = 156335

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   ctgaagaagccaaccctgct 361
             ||||||||||||||||||||
Sbjct: 38220 ctgaagaagccaaccctgct 38239
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>ref|NM_208320.1| Eremothecium gossypii ABR021Wp (ABR021W), mRNA
          Length = 3255

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 catcccggagcccaccaacc 150
           ||||||||||||||||||||
Sbjct: 603 catcccggagcccaccaacc 622
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 168      tgctgcgtctccttcgacaccccg 191
                ||||||||| ||||||||||||||
Sbjct: 20721348 tgctgcgtcgccttcgacaccccg 20721371
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>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    catcccggagcccaccaacc 150
              ||||||||||||||||||||
Sbjct: 431791 catcccggagcccaccaacc 431810
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>gb|AC027128.5| Homo sapiens chromosome 3 clone RP11-627C1 map 3p, complete sequence
          Length = 175773

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   ctgaagaagccaaccctgct 361
             ||||||||||||||||||||
Sbjct: 35177 ctgaagaagccaaccctgct 35158
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>gb|AC018495.5| Homo sapiens chromosome 3 clone RP11-193K15 map 3p, complete sequence
          Length = 173592

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 342    ctgaagaagccaaccctgct 361
              ||||||||||||||||||||
Sbjct: 131876 ctgaagaagccaaccctgct 131857


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,622,811
Number of Sequences: 3902068
Number of extensions: 2622811
Number of successful extensions: 47334
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46943
Number of HSP's gapped (non-prelim): 387
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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