ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl32f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192531.1| Oryza sativa (japonica cultivar-group), predic... 224 2e-55
2dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
3dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
4ref|XM_476020.1| Oryza sativa (japonica cultivar-group), predic... 194 2e-46
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 174 1e-40
6dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 174 1e-40
7gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
9ref|NM_102783.4| Arabidopsis thaliana unknown protein AT1G30470 ... 72 1e-09
10ref|XM_473921.1| Oryza sativa (japonica cultivar-group), predic... 72 1e-09
11gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G1... 72 1e-09
12dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
13ref|NM_128396.1| Arabidopsis thaliana unknown protein AT2G28360 ... 64 4e-07
14emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 64 4e-07
15gb|AY136417.1| Arabidopsis thaliana unknown protein (At2g28360) ... 64 4e-07
16gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map ... 64 4e-07
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
18ref|NM_100673.2| Arabidopsis thaliana unknown protein AT1G07990 ... 48 0.022
19gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, comp... 48 0.022
20gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, comp... 48 0.022
21gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana... 48 0.022
22gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, ... 48 0.022
23dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
24gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.34
25emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536... 44 0.34
26ref|XM_811829.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.3
27emb|CR722411.2|CNS0GKCX Tetraodon nigroviridis full-length cDNA 42 1.3
28emb|BX629355.3|CNS09SBR Tetraodon nigroviridis 42 1.3
29emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005... 42 1.3
30gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
31gb|BC074599.1| Xenopus tropicalis MGC69468 protein, mRNA (cDNA c... 40 5.3
32gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, com... 40 5.3
33gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, co... 40 5.3
34gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
35gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete se... 40 5.3
36emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on ch... 40 5.3
37ref|XM_965216.1| PREDICTED: Tribolium castaneum similar to CG146... 40 5.3
38emb|BX058202.1|CNS09H2M Single read from an extremity of a full-... 40 5.3
39emb|BX058201.1|CNS09H2L Single read from an extremity of a full-... 40 5.3
40gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase... 40 5.3
41dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.3
42ref|NM_171274.2| Caenorhabditis elegans K08D12.3b (K08D12.3) mRN... 40 5.3
43ref|NM_171273.2| Caenorhabditis elegans K08D12.3a (K08D12.3) mRN... 40 5.3
44dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
45gb|AF262336.1|AF262336 Danio rerio beta-spectrin (sptb) mRNA, co... 40 5.3
46ref|NM_001004819.1| Xenopus tropicalis MGC69468 protein (MGC6946... 40 5.3
47dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.3
48gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase... 40 5.3
49dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.3
50dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
51dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
52dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
53emb|CR761302.2| Xenopus tropicalis finished cDNA, clone TEgg050d11 40 5.3
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.3
55ref|NM_131525.1| Danio rerio spectrin, beta, erythrocytic (sptb)... 40 5.3
56gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
57gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, com... 40 5.3 
>ref|NM_192531.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2370

 Score =  224 bits (113), Expect = 2e-55
 Identities = 140/149 (93%)
 Strand = Plus / Plus

                                                                       
Query: 243 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 172 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 231

                                                                       
Query: 303 attattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcc 362
           |||||||||||||||||||| ||||| || ||||||||||||||| |||||||||  |||
Sbjct: 232 attattcaagagtgcaaagctctgaatacacgactcataaatttcttgcgtgacagagcc 291

                                        
Query: 363 caggtcgaacaattgcttcgttatgttgt 391
           ||||| || ||||||||||||||||||||
Sbjct: 292 caggtggagcaattgcttcgttatgttgt 320



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 204 atgttttggcgcatgaccggtctctccgcggcctcgcccgt 244
           ||||| |||||||||||||| || |||||||||||||||||
Sbjct: 1   atgttctggcgcatgaccggcctgtccgcggcctcgcccgt 41
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>dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M16, full
           insert sequence
          Length = 3155

 Score =  204 bits (103), Expect = 2e-49
 Identities = 172/195 (88%)
 Strand = Plus / Plus

                                                                       
Query: 191 cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcccgtggatac 250
           ||||| |||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 211 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgccggtggatac 270

                                                                       
Query: 251 aatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaaattattca 310
           ||| ||||||||||| || || ||| | |||||||||||||||||||||||||| |||||
Sbjct: 271 aattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaaataattca 330

                                                                       
Query: 311 agagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcccaggtcga 370
            ||||||||||| ||||| || || |||||||||||| |||| |||||||| || || ||
Sbjct: 331 ggagtgcaaagcgctgaatactcgtctcataaatttcttgcgagacaaggctcaagtgga 390

                          
Query: 371 acaattgcttcgtta 385
            ||||||||||||||
Sbjct: 391 gcaattgcttcgtta 405
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>dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039C12, full
           insert sequence
          Length = 2733

 Score =  204 bits (103), Expect = 2e-49
 Identities = 172/195 (88%)
 Strand = Plus / Plus

                                                                       
Query: 191 cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcccgtggatac 250
           ||||| |||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 198 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgccggtggatac 257

                                                                       
Query: 251 aatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaaattattca 310
           ||| ||||||||||| || || ||| | |||||||||||||||||||||||||| |||||
Sbjct: 258 aattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaaataattca 317

                                                                       
Query: 311 agagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcccaggtcga 370
            ||||||||||| ||||| || || |||||||||||| |||| |||||||| || || ||
Sbjct: 318 ggagtgcaaagcgctgaatactcgtctcataaatttcttgcgagacaaggctcaagtgga 377

                          
Query: 371 acaattgcttcgtta 385
            ||||||||||||||
Sbjct: 378 gcaattgcttcgtta 392
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>ref|XM_476020.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2313

 Score =  194 bits (98), Expect = 2e-46
 Identities = 161/182 (88%)
 Strand = Plus / Plus

                                                                       
Query: 204 atgttttggcgcatgaccggtctctccgcggcctcgcccgtggatacaatcctagacaag 263
           ||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1   atgttctggcgcatgactggtctctccgcggcctcgccggtggatacaattctagacaag 60

                                                                       
Query: 264 gaaaattttacacttgaagaacttcttgacgaggatgaaattattcaagagtgcaaagca 323
           || || || ||| | |||||||||||||||||||||||||| ||||| ||||||||||| 
Sbjct: 61  gagaacttcacattagaagaacttcttgacgaggatgaaataattcaggagtgcaaagcg 120

                                                                       
Query: 324 ctgaacacccgactcataaatttcctgcgtgacaaggcccaggtcgaacaattgcttcgt 383
           ||||| || || |||||||||||| |||| |||||||| || || || ||||||||||||
Sbjct: 121 ctgaatactcgtctcataaatttcttgcgagacaaggctcaagtggagcaattgcttcgt 180

             
Query: 384 ta 385
           ||
Sbjct: 181 ta 182
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  174 bits (88), Expect = 1e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                            
Query: 243      gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 22772327 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 22772386

                                                            
Query: 303      attattcaagagtgcaaagcactgaacacccgactcataaattt 346
                |||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 22772387 attattcaagagtgcaaagctctgaatacacgactcataaattt 22772430



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 69/78 (88%), Gaps = 3/78 (3%)
 Strand = Plus / Plus

                                                                            
Query: 171      gccggaaaccctagatccaccgccgcc---gccaccatgttttggcgcatgaccggtctc 227
                |||||||||||||||||| || |||||   ||| ||||||| |||||||||||||| || 
Sbjct: 22771392 gccggaaaccctagatccgcctccgcctccgccgccatgttctggcgcatgaccggcctg 22771451

                                  
Query: 228      tccgcggcctcgcccgtg 245
                ||||||||||||||||||
Sbjct: 22771452 tccgcggcctcgcccgtg 22771469



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 349      tgcgtgacaaggcccaggtcgaacaattgcttcgttatgttgt 391
                |||||||||  |||||||| || ||||||||||||||||||||
Sbjct: 22773045 tgcgtgacagagcccaggtggagcaattgcttcgttatgttgt 22773087



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 52       cgcgatcccaattcgatccgctc 74
                |||||||||||||||||||||||
Sbjct: 22771240 cgcgatcccaattcgatccgctc 22771262



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 35/39 (89%), Gaps = 3/39 (7%)
 Strand = Plus / Plus

                                                       
Query: 8        aaaagcgtgctgtttttt---cctcctctcgtgcgcctc 43
                |||||||||||||| |||   ||||||||||||||||||
Sbjct: 22771177 aaaagcgtgctgttcttttctcctcctctcgtgcgcctc 22771215
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score =  174 bits (88), Expect = 1e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                         
Query: 243   gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 89716 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 89775

                                                         
Query: 303   attattcaagagtgcaaagcactgaacacccgactcataaattt 346
             |||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 89776 attattcaagagtgcaaagctctgaatacacgactcataaattt 89819



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 69/78 (88%), Gaps = 3/78 (3%)
 Strand = Plus / Plus

                                                                         
Query: 171   gccggaaaccctagatccaccgccgcc---gccaccatgttttggcgcatgaccggtctc 227
             |||||||||||||||||| || |||||   ||| ||||||| |||||||||||||| || 
Sbjct: 88781 gccggaaaccctagatccgcctccgcctccgccgccatgttctggcgcatgaccggcctg 88840

                               
Query: 228   tccgcggcctcgcccgtg 245
             ||||||||||||||||||
Sbjct: 88841 tccgcggcctcgcccgtg 88858



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 349   tgcgtgacaaggcccaggtcgaacaattgcttcgttatgttgt 391
             |||||||||  |||||||| || ||||||||||||||||||||
Sbjct: 90434 tgcgtgacagagcccaggtggagcaattgcttcgttatgttgt 90476



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 52    cgcgatcccaattcgatccgctc 74
             |||||||||||||||||||||||
Sbjct: 88629 cgcgatcccaattcgatccgctc 88651



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 35/39 (89%), Gaps = 3/39 (7%)
 Strand = Plus / Plus

                                                    
Query: 8     aaaagcgtgctgtttttt---cctcctctcgtgcgcctc 43
             |||||||||||||| |||   ||||||||||||||||||
Sbjct: 88566 aaaagcgtgctgttcttttctcctcctctcgtgcgcctc 88604
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                         
Query: 243   gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
             ||||||||||| ||||||||||| || || ||| | ||||||||||||||||||||||||
Sbjct: 79883 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 79942

                                                         
Query: 303   attattcaagagtgcaaagcactgaacacccgactcataaattt 346
             || ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 79943 ataattcaggagtgcaaagcgctgaatactcgtctcataaattt 79986



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 191   cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcc 241
             ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 78773 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgcc 78823
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                            
Query: 243      gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
                ||||||||||| ||||||||||| || || ||| | ||||||||||||||||||||||||
Sbjct: 29301226 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 29301285

                                                            
Query: 303      attattcaagagtgcaaagcactgaacacccgactcataaattt 346
                || ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 29301286 ataattcaggagtgcaaagcgctgaatactcgtctcataaattt 29301329



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                   
Query: 191      cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcc 241
                ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 29300116 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgcc 29300166



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 182      tagatccaccgccgccgcca 201
                ||||||||||||||||||||
Sbjct: 16893016 tagatccaccgccgccgcca 16892997



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     ccaccgccgccgccaccatg 206
               ||||||||||||||||||||
Sbjct: 5284616 ccaccgccgccgccaccatg 5284635
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>ref|NM_102783.4| Arabidopsis thaliana unknown protein AT1G30470 mRNA, complete cds
          Length = 2939

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 285 cttcttgacgaggatgaaattattcaagagtgcaaagcactgaa 328
           ||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 334 cttcttgacgaggatgaaattattcaagaatgcaaagccctgaa 377
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>ref|XM_473921.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 243 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
           |||||||| ||  |||||||||||||||| |   | || || |||||||| |||||||||
Sbjct: 40  gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 99

                                                                   
Query: 303 attattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaa 358
           || || || |||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 100 ataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaa 155
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>gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G16 sequence, complete
             sequence
          Length = 75799

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                         
Query: 285   cttcttgacgaggatgaaattattcaagagtgcaaagcactgaa 328
             ||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 31059 cttcttgacgaggatgaaattattcaagaatgcaaagccctgaa 31102
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>dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061K16, full
           insert sequence
          Length = 2332

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 243 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
           |||||||| ||  |||||||||||||||| |   | || || |||||||| |||||||||
Sbjct: 388 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 447

                                                                   
Query: 303 attattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaa 358
           || || || |||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 448 ataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaa 503
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>ref|NM_128396.1| Arabidopsis thaliana unknown protein AT2G28360 mRNA, complete cds
          Length = 2481

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 279 gaagaacttcttgacgaggatgaaattattcaagagtgcaaagcactgaacacccgactc 338
           ||||| |||||||||||||| || ||||||||||| ||||||||  |||| | |||||||
Sbjct: 229 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 288

                   
Query: 339 ataaattt 346
           || |||||
Sbjct: 289 attaattt 296
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>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                          
Query: 243    gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
              |||||||| ||  |||||||||||||||| |   | || || |||||||| |||||||||
Sbjct: 145165 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 145224

                                              
Query: 303    attattcaagagtgcaaagcactgaacacccg 334
              || || || |||||||||||||| ||||||||
Sbjct: 145225 ataatccaggagtgcaaagcactaaacacccg 145256
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>gb|AY136417.1| Arabidopsis thaliana unknown protein (At2g28360) mRNA, complete cds
          Length = 3033

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 279 gaagaacttcttgacgaggatgaaattattcaagagtgcaaagcactgaacacccgactc 338
           ||||| |||||||||||||| || ||||||||||| ||||||||  |||| | |||||||
Sbjct: 266 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 325

                   
Query: 339 ataaattt 346
           || |||||
Sbjct: 326 attaattt 333
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>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete
             sequence
          Length = 93122

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 279   gaagaacttcttgacgaggatgaaattattcaagagtgcaaagcactgaacacccgactc 338
             ||||| |||||||||||||| || ||||||||||| ||||||||  |||| | |||||||
Sbjct: 40953 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 41012

                     
Query: 339   ataaattt 346
             || |||||
Sbjct: 41013 attaattt 41020
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                            
Query: 243      gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 302
                |||||||| ||  |||||||||||||||| |   | || || |||||||| |||||||||
Sbjct: 31567482 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 31567541

                                                
Query: 303      attattcaagagtgcaaagcactgaacacccg 334
                || || || |||||||||||||| ||||||||
Sbjct: 31567542 ataatccaggagtgcaaagcactaaacacccg 31567573
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>ref|NM_100673.2| Arabidopsis thaliana unknown protein AT1G07990 mRNA, complete cds
          Length = 2904

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 256 tagacaaggaaaattttacacttgaagaacttcttgacgaggatgaaattattcaagagt 315
           ||||||| |||||||| ||  | ||||| |||||||| ||||| || ||||||||||| |
Sbjct: 308 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 367

               
Query: 316 gcaa 319
           ||||
Sbjct: 368 gcaa 371
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>gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, complete cds
          Length = 2905

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 256 tagacaaggaaaattttacacttgaagaacttcttgacgaggatgaaattattcaagagt 315
           ||||||| |||||||| ||  | ||||| |||||||| ||||| || ||||||||||| |
Sbjct: 308 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 367

               
Query: 316 gcaa 319
           ||||
Sbjct: 368 gcaa 371
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>gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, complete cds
          Length = 2409

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 256 tagacaaggaaaattttacacttgaagaacttcttgacgaggatgaaattattcaagagt 315
           ||||||| |||||||| ||  | ||||| |||||||| ||||| || ||||||||||| |
Sbjct: 53  tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 112

               
Query: 316 gcaa 319
           ||||
Sbjct: 113 gcaa 116
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>gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana BAC T6D22 from chromosome I,
             complete sequence
          Length = 120965

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 256   tagacaaggaaaattttacacttgaagaacttcttgacgaggatgaaattattcaagagt 315
             ||||||| |||||||| ||  | ||||| |||||||| ||||| || ||||||||||| |
Sbjct: 33584 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 33643

                 
Query: 316   gcaa 319
             ||||
Sbjct: 33644 gcaa 33647
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>gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, AT.I.24-3, AT.I.24-4,
             AT.I.24-5, AT.I.24-6, AT.I.24-9 and AT.I.24-14 genes,
             partial cds, AT.I.24-7, ascorbate peroxidase (ATHAPX1),
             EF-1alpha-A1, -A2 and -A3 (EF-1alpha) and AT.I.24-13
             genes, complete cds
          Length = 63093

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 256   tagacaaggaaaattttacacttgaagaacttcttgacgaggatgaaattattcaagagt 315
             ||||||| |||||||| ||  | ||||| |||||||| ||||| || ||||||||||| |
Sbjct: 62156 tagacaaagaaaatttcacgttggaagagcttcttgatgaggaagagattattcaagaat 62215

                 
Query: 316   gcaa 319
             ||||
Sbjct: 62216 gcaa 62219
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 181      ctagatccaccgccgccgccac 202
                ||||||||||||||||||||||
Sbjct: 19118826 ctagatccaccgccgccgccac 19118805



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 183     agatccaccgccgccgccacc 203
               |||||||||||||||||||||
Sbjct: 8049192 agatccaccgccgccgccacc 8049172
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 181      ctagatccaccgccgccgccac 202
                ||||||||||||||||||||||
Sbjct: 19045053 ctagatccaccgccgccgccac 19045032



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 183     agatccaccgccgccgccacc 203
               |||||||||||||||||||||
Sbjct: 8049073 agatccaccgccgccgccacc 8049053
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>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127026

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 181    ctagatccaccgccgccgccac 202
              ||||||||||||||||||||||
Sbjct: 107153 ctagatccaccgccgccgccac 107174
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>ref|XM_811829.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509693.130) partial mRNA
          Length = 774

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 agatccaccgccgccgccacc 203
           |||||||||||||||||||||
Sbjct: 744 agatccaccgccgccgccacc 764
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>emb|CR722411.2|CNS0GKCX Tetraodon nigroviridis full-length cDNA
          Length = 410

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 187 ccaccgccgccgccaccatgt 207
           |||||||||||||||||||||
Sbjct: 17  ccaccgccgccgccaccatgt 37
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>emb|BX629355.3|CNS09SBR Tetraodon nigroviridis
          Length = 128373

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   ccaccgccgccgccaccatgt 207
             |||||||||||||||||||||
Sbjct: 72803 ccaccgccgccgccaccatgt 72783
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>emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151117

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   agatccaccgccgccgccacc 203
             |||||||||||||||||||||
Sbjct: 94486 agatccaccgccgccgccacc 94506
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>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06,
              complete sequence
          Length = 143130

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    tagatccaccgccgccgcca 201
              ||||||||||||||||||||
Sbjct: 105502 tagatccaccgccgccgcca 105483
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>gb|BC074599.1| Xenopus tropicalis MGC69468 protein, mRNA (cDNA clone MGC:69468
           IMAGE:5336075), complete cds
          Length = 1425

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ccaccgccgccgccaccatg 206
           ||||||||||||||||||||
Sbjct: 792 ccaccgccgccgccaccatg 773
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>gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, complete sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   aaattttacacttgaagaac 285
             ||||||||||||||||||||
Sbjct: 60716 aaattttacacttgaagaac 60697
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>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence
          Length = 153520

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ccaccgccgccgccaccatg 206
             ||||||||||||||||||||
Sbjct: 10925 ccaccgccgccgccaccatg 10906
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>gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009L15, complete sequence
          Length = 137570

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   tagatccaccgccgccgcca 201
             ||||||||||||||||||||
Sbjct: 24059 tagatccaccgccgccgcca 24040
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>gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete sequence
          Length = 33673

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   gatccaccgccgccgccacc 203
             ||||||||||||||||||||
Sbjct: 15746 gatccaccgccgccgccacc 15727
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>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1
             Contains the MATN1 gene for matrilin 1 cartilage matrix
             protein, a novel gene (FLJ46197, FLJ33163), the 3' end of
             the gene for Lysosomal-associated multispanning membrane
             protein-5 (LAPTM5) and a CpG island, complete sequence
          Length = 152042

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    cccctctcccgatccacccc 95
             ||||||||||||||||||||
Sbjct: 29584 cccctctcccgatccacccc 29565
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>ref|XM_965216.1| PREDICTED: Tribolium castaneum similar to CG14622-PC, isoform C
            (LOC658864), mRNA
          Length = 3767

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  tccaccgccgccgccaccat 205
            ||||||||||||||||||||
Sbjct: 1791 tccaccgccgccgccaccat 1810
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>emb|BX058202.1|CNS09H2M Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC38BH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 328

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 190 ccgccgccgccaccatgttttggc 213
           ||||||||||||||||||| ||||
Sbjct: 271 ccgccgccgccaccatgttctggc 294
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>emb|BX058201.1|CNS09H2L Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC38BH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 957

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 190 ccgccgccgccaccatgttttggc 213
           ||||||||||||||||||| ||||
Sbjct: 745 ccgccgccgccaccatgttctggc 722
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>gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase 7 (HXK7) mRNA,
           complete cds
          Length = 1816

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ccaccgccgccgccaccatg 206
           ||||||||||||||||||||
Sbjct: 111 ccaccgccgccgccaccatg 92
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     atccggccgccgccgcccgg 132
               ||||||||||||||||||||
Sbjct: 2015886 atccggccgccgccgcccgg 2015867



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 116     cggccgccgccgcccggatt 135
               ||||||||||||||||||||
Sbjct: 1120760 cggccgccgccgcccggatt 1120741
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>ref|NM_171274.2| Caenorhabditis elegans K08D12.3b (K08D12.3) mRNA, complete cds
          Length = 376

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 gatccaccgccgccgccacc 203
           ||||||||||||||||||||
Sbjct: 242 gatccaccgccgccgccacc 223
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>ref|NM_171273.2| Caenorhabditis elegans K08D12.3a (K08D12.3) mRNA, complete cds
          Length = 672

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 gatccaccgccgccgccacc 203
           ||||||||||||||||||||
Sbjct: 212 gatccaccgccgccgccacc 193
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 116      cggccgccgccgcccggattcgcg 139
                |||||| |||||||||||||||||
Sbjct: 28975145 cggccggcgccgcccggattcgcg 28975168
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>gb|AF262336.1|AF262336 Danio rerio beta-spectrin (sptb) mRNA, complete cds
          Length = 7371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 342  aatttcctgcgtgacaaggcccag 365
            ||||||||||||||| ||||||||
Sbjct: 3058 aatttcctgcgtgacgaggcccag 3081
to top
>ref|NM_001004819.1| Xenopus tropicalis MGC69468 protein (MGC69468), mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ccaccgccgccgccaccatg 206
           ||||||||||||||||||||
Sbjct: 792 ccaccgccgccgccaccatg 773
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 113     atccggccgccgccgcccgg 132
               ||||||||||||||||||||
Sbjct: 2711404 atccggccgccgccgcccgg 2711423
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>gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA,
           complete cds
          Length = 1652

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ccaccgccgccgccaccatg 206
           ||||||||||||||||||||
Sbjct: 101 ccaccgccgccgccaccatg 82
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     ccaatccggccgccgccgcc 129
               ||||||||||||||||||||
Sbjct: 2495246 ccaatccggccgccgccgcc 2495265
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>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0724B10
          Length = 169143

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   cggccgccgccgcccggattcgcg 139
             |||||| |||||||||||||||||
Sbjct: 21310 cggccggcgccgcccggattcgcg 21333
to top
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   cggccgccgccgcccggattcgcg 139
             |||||| |||||||||||||||||
Sbjct: 58203 cggccggcgccgcccggattcgcg 58226
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>dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D05, full
           insert sequence
          Length = 1777

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ccaccgccgccgccaccatg 206
           ||||||||||||||||||||
Sbjct: 147 ccaccgccgccgccaccatg 128
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>emb|CR761302.2| Xenopus tropicalis finished cDNA, clone TEgg050d11
          Length = 1306

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 187 ccaccgccgccgccaccatg 206
           ||||||||||||||||||||
Sbjct: 723 ccaccgccgccgccaccatg 704
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    agatccaccgccgccgccac 202
              ||||||||||||||||||||
Sbjct: 380562 agatccaccgccgccgccac 380543
to top
>ref|NM_131525.1| Danio rerio spectrin, beta, erythrocytic (sptb), mRNA
          Length = 7371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 342  aatttcctgcgtgacaaggcccag 365
            ||||||||||||||| ||||||||
Sbjct: 3058 aatttcctgcgtgacgaggcccag 3081
to top
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   ccaccgccgccgccaccatg 206
             ||||||||||||||||||||
Sbjct: 21317 ccaccgccgccgccaccatg 21336
to top
>gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, complete sequence
          Length = 205642

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    cccccttccccggtcgccca 112
             ||||||||||||||||||||
Sbjct: 85744 cccccttccccggtcgccca 85725


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,099,518
Number of Sequences: 3902068
Number of extensions: 4099518
Number of successful extensions: 112162
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110021
Number of HSP's gapped (non-prelim): 2133
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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