ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl32f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po... 45 7e-05
2CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (... 41 0.002
3BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 34 0.20
4RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C... 33 0.45
5PYRG_CORGL (Q8NQL7) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga... 32 0.59
6RSSA_URECA (P38981) 40S ribosomal protein SA (p40) (34/67 kDa la... 32 0.78
7MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (... 31 1.7
8ARGJ_CAUCR (Q9A3Y4) Arginine biosynthesis bifunctional protein a... 31 1.7
9ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment) 31 1.7
10LACI_KLEPN (P06220) Lactose operon repressor (Fragment) 30 2.9
11TRP_DROME (P19334) Transient receptor potential protein 30 2.9
12CHMP7_XENTR (Q5FW14) Protein CHMP7 30 2.9
13CSP_PLACB (P08672) Circumsporozoite protein precursor (CS) 30 3.8
14MILK2_HUMAN (Q8IY33) MICAL-like protein 2 30 3.8
15IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2 30 3.8
16CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6 (CYC... 29 5.0
17SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1 29 5.0
18BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (... 29 5.0
19MRCKB_RAT (Q7TT49) Serine/threonine-protein kinase MRCK beta (EC... 29 6.6
20PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor (Po... 29 6.6
21PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor (Po... 29 6.6
22PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor (Po... 29 6.6
23MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor (Mu... 29 6.6
24ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (... 29 6.6
25SYFB_BRAJA (Q89WI2) Phenylalanyl-tRNA synthetase beta chain (EC ... 28 8.6
26ESRB1_CARAU (Q9W669) Estrogen receptor beta-1 (ER-beta-1) 28 8.6
27XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells h... 28 8.6
28CEND3_MOUSE (Q8R5G7) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GA... 28 8.6
29ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in... 28 8.6
30PRO1_LEIEN (P13865) Probable transport protein (LTP) 28 8.6
31UL49_HHV11 (P10233) Tegument protein UL49 28 8.6
32NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin) 28 8.6
33IF2_RHOBA (Q7URR0) Translation initiation factor IF-2 28 8.6
34RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB... 28 8.6

>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
 Frame = +3

Query: 189 DRSALLRLKDAVPSAGLFDRWSPGAVGADHCYWPRVSCDARSRVVAILAPSGFPRRSGSG 368
           D+ AL+R+K ++ +      WS     AD C W  V CD   RV  +           + 
Sbjct: 31  DKQALMRVKQSLGNPATLSTWS--LASADCCEWDHVRCDEAGRVNNVFID------GAND 82

Query: 369 VAGRLPPSVGLLTELKELALPSL-GLFGEIP 458
           V G++P +V  LT L  L+L  L GL G IP
Sbjct: 83  VRGQIPSAVAGLTALMSLSLFRLPGLSGPIP 113



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>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
 Frame = +3

Query: 189 DRSALLRLKDAV---PSAGLFDRWSPGAVGADHCYWPRVSCDARSRVVAILAPSGFPRRS 359
           D   LL LK ++      GL D W   +    HC +  VSCD  +RV+++         S
Sbjct: 27  DMEVLLNLKSSMIGPKGHGLHD-WIHSSSPDAHCSFSGVSCDDDARVISLNV-------S 78

Query: 360 GSGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458
            + + G + P +G+LT L  L L +    GE+P
Sbjct: 79  FTPLFGTISPEIGMLTHLVNLTLAANNFTGELP 111



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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +3

Query: 363 SGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458
           + +AG +PP +G L  LK+L L +  L GEIP
Sbjct: 433 NNIAGEIPPEIGKLQNLKDLILNNNQLTGEIP 464



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>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)|
          Length = 966

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -3

Query: 448 PKRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQE 296
           PK P+  + S+  S  SP   GS P T LP  +G P G    +   L SQE
Sbjct: 521 PKPPQSPETST--SKDSPPGQGSSPTTELPSCQGLPAGQESTSQDPLLSQE 569



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>PYRG_CORGL (Q8NQL7) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 554

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
 Frame = +3

Query: 198 ALLRLKDAVPSAGL--FDRWSPGAVGADHCYWPRVSCDARSRVVAILAPSGFPRRSGSGV 371
           A L + +AV +AG   + R +   + +D C  P  +  A S + AI+ P GF  R   G+
Sbjct: 317 AYLSVVEAVRAAGYANWTRTNIKWITSDDCETPSGAMKALSGLDAIVVPGGFGIR---GI 373

Query: 372 AGRLPPSVGLLTELKELALPSLGL 443
            G+    +G +T  +E  +P LGL
Sbjct: 374 EGK----IGAITFAREHKIPLLGL 393



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>RSSA_URECA (P38981) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding|
           protein)
          Length = 317

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = -3

Query: 376 PATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAP-----TAPGDHRSNSPAEGTASL 212
           P  P+P+L G   G   ATT D           WS P     TAP  + +N+ A G  + 
Sbjct: 252 PVAPVPILAG---GVDAATTED-----------WSVPAQSDWTAPAANPANAAAAGAPAP 297

Query: 211 SRRSADLSCSWPRSG 167
           +  +A  + SW  SG
Sbjct: 298 APAAATTTESWGGSG 312



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>MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)|
            (CDC42-binding protein kinase beta) (Myotonic dystrophy
            kinase-related CDC42-binding kinase beta) (Myotonic
            dystrophy protein kinase-like beta) (MRCK beta)
            (DMPK-like beta)
          Length = 1713

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
 Frame = -3

Query: 439  PREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAPTA 260
            PR+  + S   V  P+ GGS P  P+PL              D  S +       S P+ 
Sbjct: 1630 PRQPPSRSKPYVSWPSSGGSEPGVPVPLRSMSDPDQDFDKEPDSDSTKHSTPSNSSNPSG 1689

Query: 259  P----GDHRSNSPAEG 224
            P      HRS  P EG
Sbjct: 1690 PPSPNSPHRSQLPMEG 1705



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>ARGJ_CAUCR (Q9A3Y4) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 403

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = +3

Query: 183 EQDRSALLRLKDAVPSAGLFDRWSPGAVGADHCYWPRVS---CDARSRVVAILAPSGFPR 353
           E++   L+R  +   +AG+F R   G+   D C     +    D R+ VV     + F  
Sbjct: 25  EREDLLLMRFAEGTSAAGVFTRHGVGSAPVDWCKRQLAATGGADVRALVVNAGCANSFTG 84

Query: 354 RSGSGVAGRLPPSVGLLTEL--KELALPSLGLFGEI 455
           + G+    R+  +VG   +   +++ + S G+ G I
Sbjct: 85  KPGADAVRRVATAVGKRFDCRQRDVMMASTGVIGVI 120



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>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)|
          Length = 2469

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 78   PPSRRSRGAVVVGAAQGRRRPTRGR 4
            P SRR+  A   G AQGR RP +GR
Sbjct: 1603 PQSRRTEEAAGAGRAQGRGRPAKGR 1627



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>LACI_KLEPN (P06220) Lactose operon repressor (Fragment)|
          Length = 354

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 294 VSCDARSRVV-AILAPSGFPRRSGSGVAGRLPPSVGLLTELKELALPS 434
           VS   R +V+ A+ A    P RS   +AG+  PS+GL+T    L  PS
Sbjct: 32  VSARTREQVIRAMQALHYVPNRSAQLLAGKAAPSIGLITASVTLHAPS 79



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>TRP_DROME (P19334) Transient receptor potential protein|
          Length = 1275

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -3

Query: 436  REGKASSLSSVRSPTD-GGSRPATPLPLLRGKPEGA----RMATTRDLASQETRGQ*QWS 272
            + G++    +   PT  G ++PA P P    KPE A      + T       T G  + +
Sbjct: 1052 KPGESQKKDAPAPPTKPGDTKPAAPKPGESAKPEAAAKKEESSKTEASKPAATNGAAKSA 1111

Query: 271  APTAPGDHRSNS 236
            AP+AP D + +S
Sbjct: 1112 APSAPSDAKPDS 1123



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>CHMP7_XENTR (Q5FW14) Protein CHMP7|
          Length = 468

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 454 ISPKRPREGKASSLSSVRSPTDGGSRPATPLPLLR 350
           ISP+RP E K    S  RSP DG    + P P+L+
Sbjct: 436 ISPQRPTEWKTDQAS--RSPADGSFSRSVPEPVLQ 468



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>CSP_PLACB (P08672) Circumsporozoite protein precursor (CS)|
          Length = 378

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
 Frame = -3

Query: 454 ISPKRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QW 275
           + PK+PRE K     +     +G   PA P        +GA  A   D A     G    
Sbjct: 83  VEPKKPRENKLKQPPAGDGAPEGDGAPAAP------AGDGAPAAPAGDGAPAAPAGD--- 133

Query: 274 SAPTAP-GDHRSNSPAEGTASLSRRSADLSCSWPRSGDG 161
            AP AP GD    +PA G  + +  + D + + P +GDG
Sbjct: 134 GAPAAPAGDGAPAAPA-GDGAPAAPAGDGAPAAP-AGDG 170



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>MILK2_HUMAN (Q8IY33) MICAL-like protein 2|
          Length = 904

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = -3

Query: 385 GSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAPTAPGDHRSNSPAEGTASLSR 206
           GSRP    P+ +GK        +  L   +  G   W A   P D R  SPAE T     
Sbjct: 551 GSRPKPEAPMAKGKSTTLTQDMSTSLQEGQEDGPAGWRANLKPVDRR--SPAERTLKPKE 608

Query: 205 RSADLSCSWPRSGD 164
             A    + PR+G+
Sbjct: 609 PRA---LAEPRAGE 619



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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
 Frame = -3

Query: 397 PTDGGSRPATPLPLLRGKPEGAR-MATTRDLASQETRGQ*QWSAPTAP---------GDH 248
           P  GG+RP  P      KP GAR     +D   Q  +G+     P AP         G  
Sbjct: 164 PKPGGARPGAP------KPGGARPSGPGQDRGQQGGQGRPGGQRPGAPAQRPGGRPGGPR 217

Query: 247 RSNSP--AEGTASLSRRSADLSCSWPRSG 167
             N+P  + G A ++R SA      PR G
Sbjct: 218 PGNNPFTSGGNAGMARPSAPRPQGGPRPG 246



 Score = 28.5 bits (62), Expect = 8.6
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
 Frame = -3

Query: 430 GKASSLSSVRSPTDGGSRPATPLPLLRGKPEGA-----RMATTRDLASQETRGQ*QWSAP 266
           G   S     +P     RP+ P P   G  + A     R A  R  A+ +     Q +AP
Sbjct: 55  GNGRSAGRPAAPKKAAPRPSAPSPAQAGPSQAAPAAGDRAAAPRPSAAPKAPAAQQPAAP 114

Query: 265 TAPGDHRSNSP 233
           +AP    S  P
Sbjct: 115 SAPAPAPSQGP 125



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>CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6|
           (CYC8-TUP1-interacting protein 6)
          Length = 506

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 23/90 (25%), Positives = 36/90 (40%)
 Frame = -3

Query: 445 KRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAP 266
           K   + K SS  S +  T+    P  PL  +    + +R A++R        G  + S P
Sbjct: 334 KEASQEKESSTGSAQD-TEKTDEPILPLTSISSSEDDSRKASSR--------GSKRVSKP 384

Query: 265 TAPGDHRSNSPAEGTASLSRRSADLSCSWP 176
              G+    S      + +RRSAD+    P
Sbjct: 385 ARKGNRTRRSNTSSDTNQNRRSADIGTDKP 414



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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 21/82 (25%), Positives = 32/82 (39%)
 Frame = -3

Query: 445 KRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAP 266
           +RP+     +    R      SR A+P P  R K    RM   +   S  T+   +  +P
Sbjct: 505 ERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSP 564

Query: 265 TAPGDHRSNSPAEGTASLSRRS 200
           + P   R  SP+       RR+
Sbjct: 565 SPPPTRRRRSPSPAPPPRRRRT 586



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>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
          Length = 577

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 28/84 (33%), Positives = 32/84 (38%)
 Frame = -3

Query: 433 EGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAPTAPG 254
           E  A++    +SP  GG   A        K  G   AT    A+Q          PTA G
Sbjct: 127 EAAAATPQRSQSPLRGGMTEAAQTD----KQCGQMPATATTAAAQP---------PTAHG 173

Query: 253 DHRSNSPAEGTASLSRRSADLSCS 182
             RS SPA    S S  SA L  S
Sbjct: 174 PERSQSPAASDCSSSSSSASLPSS 197



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>MRCKB_RAT (Q7TT49) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)|
            (CDC42-binding protein kinase beta) (Myotonic dystrophy
            kinase-related CDC42-binding kinase beta) (Myotonic
            dystrophy protein kinase-like beta) (MRCK beta)
            (DMPK-like beta)
          Length = 1713

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
 Frame = -3

Query: 439  PREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAPTA 260
            PR+  + +   V  P+ GGS P  P+PL              D  S +       S P+ 
Sbjct: 1630 PRQLPSRNKPYVSWPSSGGSEPGVPVPLRSMSDPDQDFDKEPDSDSTKHSTPSNSSNPSG 1689

Query: 259  P----GDHRSNSPAEG 224
            P      HRS  P EG
Sbjct: 1690 PPSPNSPHRSQLPLEG 1705



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>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3)
          Length = 342

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 25/116 (21%)
 Frame = +3

Query: 186 QDRSALLRLKDAVPSAGLFDRWSPGAVGADHC--YWPRVSCDARSRVVAI--------LA 335
           QD+ ALL++K  + +      W P     D C   W  V CD  ++   +          
Sbjct: 35  QDKQALLQIKKDLGNPTTLSSWLP---TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNL 91

Query: 336 PSGFPRRSG---------------SGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458
           P  +P  S                + + G +PP++  LT+L  L +    + G IP
Sbjct: 92  PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 147



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>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 342

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 25/116 (21%)
 Frame = +3

Query: 186 QDRSALLRLKDAVPSAGLFDRWSPGAVGADHC--YWPRVSCDARSR--------VVAILA 335
           QD+ ALL++K  + +      W P     D C   W  V CD  ++        +  +  
Sbjct: 35  QDKQALLQIKKDLGNPTTLSSWLP---TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 91

Query: 336 PSGFPRRSG---------------SGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458
           P  +P  S                + + G +PP++  LT+L  L +    + G IP
Sbjct: 92  PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 147



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>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 342

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 25/116 (21%)
 Frame = +3

Query: 186 QDRSALLRLKDAVPSAGLFDRWSPGAVGADHC--YWPRVSCDARSRVVAI--------LA 335
           QD+ ALL++K  + +      W P     D C   W  V CD  ++   +          
Sbjct: 35  QDKQALLQIKKDLGNPTTLSSWLP---TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNL 91

Query: 336 PSGFPRRSG---------------SGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458
           P  +P  S                + + G +PP++  LT+L  L +    + G IP
Sbjct: 92  PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 147



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>MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin) (GP100)
          Length = 862

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
 Frame = -3

Query: 412 SSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETR-GQ*QWSAPTAPGDHRSNS 236
           SS ++P  G S+P  P P   G    ++ AT    ++Q  R G  Q   PT PG   S+ 
Sbjct: 574 SSTQTPKPGTSQPMVPTP---GASTSSQPATPSGSSTQTPRPGTSQPMVPT-PGASTSSQ 629

Query: 235 PAEGTASLSRRSADLS---CSWPRSGDGDV 155
           PA  + S        S    + P SG G++
Sbjct: 630 PATPSGSTQTPKPGTSQPTTTGPISGVGEL 659



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>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore domain|
            potassium channel Ork1)
          Length = 1001

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = -3

Query: 454  ISPKRPREGKASSLSSVRSPTDGGSRPATPLPLLRG-KPEGARMATTRDLASQETRGQ*Q 278
            +SP  P  G  S+L +      GG+     LPL  G +P  +   +      Q ++ Q +
Sbjct: 924  LSPTSPPGGSGSALPAGAIDESGGTSAQRLLPLPAGTRPSTSSTHSPLSRIVQISQAQRK 983

Query: 277  WSAPTAPGDHRSNSPAE 227
             S P+A     S +PAE
Sbjct: 984  SSMPSAAATGSSGAPAE 1000



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>SYFB_BRAJA (Q89WI2) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 802

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 24/69 (34%), Positives = 35/69 (50%)
 Frame = +3

Query: 171 DRGQEQDRSALLRLKDAVPSAGLFDRWSPGAVGADHCYWPRVSCDARSRVVAILAPSGFP 350
           DR Q+Q  +A    +    S GL   WS G+V AD         DA++  +A+LA +G P
Sbjct: 580 DRPQDQFMAASGVRRGFASSEGLGRHWS-GSVQAD-------LFDAKADALAVLAAAGAP 631

Query: 351 RRSGSGVAG 377
            ++   VAG
Sbjct: 632 MQALQIVAG 640



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>ESRB1_CARAU (Q9W669) Estrogen receptor beta-1 (ER-beta-1)|
          Length = 568

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
 Frame = +3

Query: 9   PSSVVACPALHQQ-----PQHPGSSGWADMVP 89
           P S V+  ALHQQ     P HP    WA++ P
Sbjct: 104 PHSHVSSLALHQQQTRLQPNHPTGGTWAELTP 135



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>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog|
           (Xeroderma pigmentosum group C-complementing protein
           homolog) (p125)
          Length = 930

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 274 SAPTAPGDHRSNSPAEGTASLSRRSADLSCSWPRS 170
           +AP A G   S+   EGT+S +  +  L+ SWP++
Sbjct: 865 AAPHAAGGGLSSDEEEGTSSQAEAARVLAASWPQN 899



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>CEND3_MOUSE (Q8R5G7) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin|
           repeat and pleckstrin homology domain-containing protein
           3) (Dual specificity Rho- and Arf-GTPase-activating
           protein 1)
          Length = 1538

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
 Frame = +2

Query: 29  PCAAPTTTAPRLLRLGGYGARSPEHXXXXXXXXXXXXGL----RLFHVPVAGPWPGA 187
           P +      P LLR+G    RSP H            GL     LF  P  GP P A
Sbjct: 784 PLSCHQLLGPGLLRMGRLWLRSPSHAGLAPGLWLSGFGLLRGDHLFLCPAPGPGPPA 840



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>ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in the nucleus|
           (Acinus)
          Length = 1341

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 27/84 (32%), Positives = 36/84 (42%)
 Frame = -3

Query: 451 SPKRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWS 272
           S +      +SS S  RSP   GSR  +P   LR K      A T   A+   R +   S
Sbjct: 578 SSRSSSSSSSSSRSRSRSPDSSGSRSHSP---LRSKQRDVAQARTH--ANPRGRPK-MGS 631

Query: 271 APTAPGDHRSNSPAEGTASLSRRS 200
             T+    RS S +   +S SR+S
Sbjct: 632 RSTSESRSRSRSRSRSASSNSRKS 655



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>PRO1_LEIEN (P13865) Probable transport protein (LTP)|
          Length = 567

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 277 WSAPTAPGDHRSNSPAEGTASLSRRSADLSCSWPRSGD 164
           W   T   ++  +SPAE   +L+R  AD  C W  S +
Sbjct: 109 WPEVTCRKEYAYSSPAEMPGALARCEADSRCRWSYSDE 146



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>UL49_HHV11 (P10233) Tegument protein UL49|
          Length = 301

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/80 (28%), Positives = 30/80 (37%)
 Frame = -3

Query: 457 GISPKRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*Q 278
           G  P R     A S  + R+PT     P T     +  P      TTR   S +      
Sbjct: 95  GPGPARAPPPPAGSGGAGRTPTTAPRAPRTQRVATKA-PAAPAAETTRGRKSAQPESAAL 153

Query: 277 WSAPTAPGDHRSNSPAEGTA 218
             AP +    RS +PA+G A
Sbjct: 154 PDAPASTAPTRSKTPAQGLA 173



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>NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)|
          Length = 1426

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
 Frame = -3

Query: 451 SPKRPREGKASSLSSVRSPTDGGSRPATPLPLL----RGKPEGARMATTRDLASQETRGQ 284
           +P  P  G        R P    S P  P+P +    +  P G  ++ ++  AS  +  Q
Sbjct: 457 APTEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLAASPRSPTQ 516

Query: 283 *QWSAPTAPGDHRSN-SPAEG-----TASLSRRSADLS 188
              + PT+   H S  SPA+       A +S   ADLS
Sbjct: 517 HCLARPTSQLPHGSQASPAQAQEFPLEAGISHLEADLS 554



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>IF2_RHOBA (Q7URR0) Translation initiation factor IF-2|
          Length = 1038

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
 Frame = -3

Query: 445 KRPREGKASSLSSVRSPT-DGGSRPATPLPLLRG------KPEGARMATTRDLASQETRG 287
           + P+   A    +  +P  DG  +P   LP   G       P G  +        Q T+ 
Sbjct: 129 RTPKLAPAPEAKAPEAPAADGSPKPEIRLPKTGGVGTGMASPSGRGIGMGAKTDGQSTKP 188

Query: 286 Q*QWSAPTAPGDHRSNSPAEGTASLSRRSADLSCS 182
           +   SAP+ PG    +   +   S  R SA ++ S
Sbjct: 189 ESAASAPSVPGPKSDSGGRKAPESPKRESAPVASS 223



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>RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB-RGS)|
          Length = 967

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 412 SSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQE 296
           +S  SP   GS P T +P  +G P G    +   L SQE
Sbjct: 532 TSKDSPPGQGSSPTTEVPSCQGLPAGQESTSQDPLLSQE 570


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,468,705
Number of Sequences: 219361
Number of extensions: 886740
Number of successful extensions: 3844
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3836
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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