Clone Name | bastl32f06 |
---|---|
Clone Library Name | barley_pub |
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 45.4 bits (106), Expect = 7e-05 Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Frame = +3 Query: 189 DRSALLRLKDAVPSAGLFDRWSPGAVGADHCYWPRVSCDARSRVVAILAPSGFPRRSGSG 368 D+ AL+R+K ++ + WS AD C W V CD RV + + Sbjct: 31 DKQALMRVKQSLGNPATLSTWS--LASADCCEWDHVRCDEAGRVNNVFID------GAND 82 Query: 369 VAGRLPPSVGLLTELKELALPSL-GLFGEIP 458 V G++P +V LT L L+L L GL G IP Sbjct: 83 VRGQIPSAVAGLTALMSLSLFRLPGLSGPIP 113
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 40.8 bits (94), Expect = 0.002 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%) Frame = +3 Query: 189 DRSALLRLKDAV---PSAGLFDRWSPGAVGADHCYWPRVSCDARSRVVAILAPSGFPRRS 359 D LL LK ++ GL D W + HC + VSCD +RV+++ S Sbjct: 27 DMEVLLNLKSSMIGPKGHGLHD-WIHSSSPDAHCSFSGVSCDDDARVISLNV-------S 78 Query: 360 GSGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458 + + G + P +G+LT L L L + GE+P Sbjct: 79 FTPLFGTISPEIGMLTHLVNLTLAANNFTGELP 111
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +3 Query: 363 SGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458 + +AG +PP +G L LK+L L + L GEIP Sbjct: 433 NNIAGEIPPEIGKLQNLKDLILNNNQLTGEIP 464
>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)| Length = 966 Score = 32.7 bits (73), Expect = 0.45 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = -3 Query: 448 PKRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQE 296 PK P+ + S+ S SP GS P T LP +G P G + L SQE Sbjct: 521 PKPPQSPETST--SKDSPPGQGSSPTTELPSCQGLPAGQESTSQDPLLSQE 569
>PYRG_CORGL (Q8NQL7) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 554 Score = 32.3 bits (72), Expect = 0.59 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%) Frame = +3 Query: 198 ALLRLKDAVPSAGL--FDRWSPGAVGADHCYWPRVSCDARSRVVAILAPSGFPRRSGSGV 371 A L + +AV +AG + R + + +D C P + A S + AI+ P GF R G+ Sbjct: 317 AYLSVVEAVRAAGYANWTRTNIKWITSDDCETPSGAMKALSGLDAIVVPGGFGIR---GI 373 Query: 372 AGRLPPSVGLLTELKELALPSLGL 443 G+ +G +T +E +P LGL Sbjct: 374 EGK----IGAITFAREHKIPLLGL 393
>RSSA_URECA (P38981) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding| protein) Length = 317 Score = 32.0 bits (71), Expect = 0.78 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = -3 Query: 376 PATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAP-----TAPGDHRSNSPAEGTASL 212 P P+P+L G G ATT D WS P TAP + +N+ A G + Sbjct: 252 PVAPVPILAG---GVDAATTED-----------WSVPAQSDWTAPAANPANAAAAGAPAP 297 Query: 211 SRRSADLSCSWPRSG 167 + +A + SW SG Sbjct: 298 APAAATTTESWGGSG 312
>MRCKB_MOUSE (Q7TT50) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)| (CDC42-binding protein kinase beta) (Myotonic dystrophy kinase-related CDC42-binding kinase beta) (Myotonic dystrophy protein kinase-like beta) (MRCK beta) (DMPK-like beta) Length = 1713 Score = 30.8 bits (68), Expect = 1.7 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 4/76 (5%) Frame = -3 Query: 439 PREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAPTA 260 PR+ + S V P+ GGS P P+PL D S + S P+ Sbjct: 1630 PRQPPSRSKPYVSWPSSGGSEPGVPVPLRSMSDPDQDFDKEPDSDSTKHSTPSNSSNPSG 1689 Query: 259 P----GDHRSNSPAEG 224 P HRS P EG Sbjct: 1690 PPSPNSPHRSQLPMEG 1705
>ARGJ_CAUCR (Q9A3Y4) Arginine biosynthesis bifunctional protein argJ [Includes:| Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (Ornithine transacetylase) (OATase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate syn Length = 403 Score = 30.8 bits (68), Expect = 1.7 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%) Frame = +3 Query: 183 EQDRSALLRLKDAVPSAGLFDRWSPGAVGADHCYWPRVS---CDARSRVVAILAPSGFPR 353 E++ L+R + +AG+F R G+ D C + D R+ VV + F Sbjct: 25 EREDLLLMRFAEGTSAAGVFTRHGVGSAPVDWCKRQLAATGGADVRALVVNAGCANSFTG 84 Query: 354 RSGSGVAGRLPPSVGLLTEL--KELALPSLGLFGEI 455 + G+ R+ +VG + +++ + S G+ G I Sbjct: 85 KPGADAVRRVATAVGKRFDCRQRDVMMASTGVIGVI 120
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -1 Query: 78 PPSRRSRGAVVVGAAQGRRRPTRGR 4 P SRR+ A G AQGR RP +GR Sbjct: 1603 PQSRRTEEAAGAGRAQGRGRPAKGR 1627
>LACI_KLEPN (P06220) Lactose operon repressor (Fragment)| Length = 354 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 294 VSCDARSRVV-AILAPSGFPRRSGSGVAGRLPPSVGLLTELKELALPS 434 VS R +V+ A+ A P RS +AG+ PS+GL+T L PS Sbjct: 32 VSARTREQVIRAMQALHYVPNRSAQLLAGKAAPSIGLITASVTLHAPS 79
>TRP_DROME (P19334) Transient receptor potential protein| Length = 1275 Score = 30.0 bits (66), Expect = 2.9 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Frame = -3 Query: 436 REGKASSLSSVRSPTD-GGSRPATPLPLLRGKPEGA----RMATTRDLASQETRGQ*QWS 272 + G++ + PT G ++PA P P KPE A + T T G + + Sbjct: 1052 KPGESQKKDAPAPPTKPGDTKPAAPKPGESAKPEAAAKKEESSKTEASKPAATNGAAKSA 1111 Query: 271 APTAPGDHRSNS 236 AP+AP D + +S Sbjct: 1112 APSAPSDAKPDS 1123
>CHMP7_XENTR (Q5FW14) Protein CHMP7| Length = 468 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -3 Query: 454 ISPKRPREGKASSLSSVRSPTDGGSRPATPLPLLR 350 ISP+RP E K S RSP DG + P P+L+ Sbjct: 436 ISPQRPTEWKTDQAS--RSPADGSFSRSVPEPVLQ 468
>CSP_PLACB (P08672) Circumsporozoite protein precursor (CS)| Length = 378 Score = 29.6 bits (65), Expect = 3.8 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Frame = -3 Query: 454 ISPKRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QW 275 + PK+PRE K + +G PA P +GA A D A G Sbjct: 83 VEPKKPRENKLKQPPAGDGAPEGDGAPAAP------AGDGAPAAPAGDGAPAAPAGD--- 133 Query: 274 SAPTAP-GDHRSNSPAEGTASLSRRSADLSCSWPRSGDG 161 AP AP GD +PA G + + + D + + P +GDG Sbjct: 134 GAPAAPAGDGAPAAPA-GDGAPAAPAGDGAPAAP-AGDG 170
>MILK2_HUMAN (Q8IY33) MICAL-like protein 2| Length = 904 Score = 29.6 bits (65), Expect = 3.8 Identities = 23/74 (31%), Positives = 30/74 (40%) Frame = -3 Query: 385 GSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAPTAPGDHRSNSPAEGTASLSR 206 GSRP P+ +GK + L + G W A P D R SPAE T Sbjct: 551 GSRPKPEAPMAKGKSTTLTQDMSTSLQEGQEDGPAGWRANLKPVDRR--SPAERTLKPKE 608 Query: 205 RSADLSCSWPRSGD 164 A + PR+G+ Sbjct: 609 PRA---LAEPRAGE 619
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.6 bits (65), Expect = 3.8 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 12/89 (13%) Frame = -3 Query: 397 PTDGGSRPATPLPLLRGKPEGAR-MATTRDLASQETRGQ*QWSAPTAP---------GDH 248 P GG+RP P KP GAR +D Q +G+ P AP G Sbjct: 164 PKPGGARPGAP------KPGGARPSGPGQDRGQQGGQGRPGGQRPGAPAQRPGGRPGGPR 217 Query: 247 RSNSP--AEGTASLSRRSADLSCSWPRSG 167 N+P + G A ++R SA PR G Sbjct: 218 PGNNPFTSGGNAGMARPSAPRPQGGPRPG 246 Score = 28.5 bits (62), Expect = 8.6 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 5/71 (7%) Frame = -3 Query: 430 GKASSLSSVRSPTDGGSRPATPLPLLRGKPEGA-----RMATTRDLASQETRGQ*QWSAP 266 G S +P RP+ P P G + A R A R A+ + Q +AP Sbjct: 55 GNGRSAGRPAAPKKAAPRPSAPSPAQAGPSQAAPAAGDRAAAPRPSAAPKAPAAQQPAAP 114 Query: 265 TAPGDHRSNSP 233 +AP S P Sbjct: 115 SAPAPAPSQGP 125
>CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6| (CYC8-TUP1-interacting protein 6) Length = 506 Score = 29.3 bits (64), Expect = 5.0 Identities = 23/90 (25%), Positives = 36/90 (40%) Frame = -3 Query: 445 KRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAP 266 K + K SS S + T+ P PL + + +R A++R G + S P Sbjct: 334 KEASQEKESSTGSAQD-TEKTDEPILPLTSISSSEDDSRKASSR--------GSKRVSKP 384 Query: 265 TAPGDHRSNSPAEGTASLSRRSADLSCSWP 176 G+ S + +RRSAD+ P Sbjct: 385 ARKGNRTRRSNTSSDTNQNRRSADIGTDKP 414
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 29.3 bits (64), Expect = 5.0 Identities = 21/82 (25%), Positives = 32/82 (39%) Frame = -3 Query: 445 KRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAP 266 +RP+ + R SR A+P P R K RM + S T+ + +P Sbjct: 505 ERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSP 564 Query: 265 TAPGDHRSNSPAEGTASLSRRS 200 + P R SP+ RR+ Sbjct: 565 SPPPTRRRRSPSPAPPPRRRRT 586
>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) Length = 577 Score = 29.3 bits (64), Expect = 5.0 Identities = 28/84 (33%), Positives = 32/84 (38%) Frame = -3 Query: 433 EGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAPTAPG 254 E A++ +SP GG A K G AT A+Q PTA G Sbjct: 127 EAAAATPQRSQSPLRGGMTEAAQTD----KQCGQMPATATTAAAQP---------PTAHG 173 Query: 253 DHRSNSPAEGTASLSRRSADLSCS 182 RS SPA S S SA L S Sbjct: 174 PERSQSPAASDCSSSSSSASLPSS 197
>MRCKB_RAT (Q7TT49) Serine/threonine-protein kinase MRCK beta (EC 2.7.11.1)| (CDC42-binding protein kinase beta) (Myotonic dystrophy kinase-related CDC42-binding kinase beta) (Myotonic dystrophy protein kinase-like beta) (MRCK beta) (DMPK-like beta) Length = 1713 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 4/76 (5%) Frame = -3 Query: 439 PREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWSAPTA 260 PR+ + + V P+ GGS P P+PL D S + S P+ Sbjct: 1630 PRQLPSRNKPYVSWPSSGGSEPGVPVPLRSMSDPDQDFDKEPDSDSTKHSTPSNSSNPSG 1689 Query: 259 P----GDHRSNSPAEG 224 P HRS P EG Sbjct: 1690 PPSPNSPHRSQLPLEG 1705
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 25/116 (21%) Frame = +3 Query: 186 QDRSALLRLKDAVPSAGLFDRWSPGAVGADHC--YWPRVSCDARSRVVAI--------LA 335 QD+ ALL++K + + W P D C W V CD ++ + Sbjct: 35 QDKQALLQIKKDLGNPTTLSSWLP---TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNL 91 Query: 336 PSGFPRRSG---------------SGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458 P +P S + + G +PP++ LT+L L + + G IP Sbjct: 92 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 147
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 25/116 (21%) Frame = +3 Query: 186 QDRSALLRLKDAVPSAGLFDRWSPGAVGADHC--YWPRVSCDARSR--------VVAILA 335 QD+ ALL++K + + W P D C W V CD ++ + + Sbjct: 35 QDKQALLQIKKDLGNPTTLSSWLP---TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 91 Query: 336 PSGFPRRSG---------------SGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458 P +P S + + G +PP++ LT+L L + + G IP Sbjct: 92 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 147
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 28.9 bits (63), Expect = 6.6 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 25/116 (21%) Frame = +3 Query: 186 QDRSALLRLKDAVPSAGLFDRWSPGAVGADHC--YWPRVSCDARSRVVAI--------LA 335 QD+ ALL++K + + W P D C W V CD ++ + Sbjct: 35 QDKQALLQIKKDLGNPTTLSSWLP---TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHNL 91 Query: 336 PSGFPRRSG---------------SGVAGRLPPSVGLLTELKELALPSLGLFGEIP 458 P +P S + + G +PP++ LT+L L + + G IP Sbjct: 92 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP 147
>MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor| (Mu-protocadherin) (GP100) Length = 862 Score = 28.9 bits (63), Expect = 6.6 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Frame = -3 Query: 412 SSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETR-GQ*QWSAPTAPGDHRSNS 236 SS ++P G S+P P P G ++ AT ++Q R G Q PT PG S+ Sbjct: 574 SSTQTPKPGTSQPMVPTP---GASTSSQPATPSGSSTQTPRPGTSQPMVPT-PGASTSSQ 629 Query: 235 PAEGTASLSRRSADLS---CSWPRSGDGDV 155 PA + S S + P SG G++ Sbjct: 630 PATPSGSTQTPKPGTSQPTTTGPISGVGEL 659
>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore domain| potassium channel Ork1) Length = 1001 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = -3 Query: 454 ISPKRPREGKASSLSSVRSPTDGGSRPATPLPLLRG-KPEGARMATTRDLASQETRGQ*Q 278 +SP P G S+L + GG+ LPL G +P + + Q ++ Q + Sbjct: 924 LSPTSPPGGSGSALPAGAIDESGGTSAQRLLPLPAGTRPSTSSTHSPLSRIVQISQAQRK 983 Query: 277 WSAPTAPGDHRSNSPAE 227 S P+A S +PAE Sbjct: 984 SSMPSAAATGSSGAPAE 1000
>SYFB_BRAJA (Q89WI2) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 802 Score = 28.5 bits (62), Expect = 8.6 Identities = 24/69 (34%), Positives = 35/69 (50%) Frame = +3 Query: 171 DRGQEQDRSALLRLKDAVPSAGLFDRWSPGAVGADHCYWPRVSCDARSRVVAILAPSGFP 350 DR Q+Q +A + S GL WS G+V AD DA++ +A+LA +G P Sbjct: 580 DRPQDQFMAASGVRRGFASSEGLGRHWS-GSVQAD-------LFDAKADALAVLAAAGAP 631 Query: 351 RRSGSGVAG 377 ++ VAG Sbjct: 632 MQALQIVAG 640
>ESRB1_CARAU (Q9W669) Estrogen receptor beta-1 (ER-beta-1)| Length = 568 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 5/32 (15%) Frame = +3 Query: 9 PSSVVACPALHQQ-----PQHPGSSGWADMVP 89 P S V+ ALHQQ P HP WA++ P Sbjct: 104 PHSHVSSLALHQQQTRLQPNHPTGGTWAELTP 135
>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog| (Xeroderma pigmentosum group C-complementing protein homolog) (p125) Length = 930 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -3 Query: 274 SAPTAPGDHRSNSPAEGTASLSRRSADLSCSWPRS 170 +AP A G S+ EGT+S + + L+ SWP++ Sbjct: 865 AAPHAAGGGLSSDEEEGTSSQAEAARVLAASWPQN 899
>CEND3_MOUSE (Q8R5G7) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin| repeat and pleckstrin homology domain-containing protein 3) (Dual specificity Rho- and Arf-GTPase-activating protein 1) Length = 1538 Score = 28.5 bits (62), Expect = 8.6 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 4/57 (7%) Frame = +2 Query: 29 PCAAPTTTAPRLLRLGGYGARSPEHXXXXXXXXXXXXGL----RLFHVPVAGPWPGA 187 P + P LLR+G RSP H GL LF P GP P A Sbjct: 784 PLSCHQLLGPGLLRMGRLWLRSPSHAGLAPGLWLSGFGLLRGDHLFLCPAPGPGPPA 840
>ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in the nucleus| (Acinus) Length = 1341 Score = 28.5 bits (62), Expect = 8.6 Identities = 27/84 (32%), Positives = 36/84 (42%) Frame = -3 Query: 451 SPKRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*QWS 272 S + +SS S RSP GSR +P LR K A T A+ R + S Sbjct: 578 SSRSSSSSSSSSRSRSRSPDSSGSRSHSP---LRSKQRDVAQARTH--ANPRGRPK-MGS 631 Query: 271 APTAPGDHRSNSPAEGTASLSRRS 200 T+ RS S + +S SR+S Sbjct: 632 RSTSESRSRSRSRSRSASSNSRKS 655
>PRO1_LEIEN (P13865) Probable transport protein (LTP)| Length = 567 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 277 WSAPTAPGDHRSNSPAEGTASLSRRSADLSCSWPRSGD 164 W T ++ +SPAE +L+R AD C W S + Sbjct: 109 WPEVTCRKEYAYSSPAEMPGALARCEADSRCRWSYSDE 146
>UL49_HHV11 (P10233) Tegument protein UL49| Length = 301 Score = 28.5 bits (62), Expect = 8.6 Identities = 23/80 (28%), Positives = 30/80 (37%) Frame = -3 Query: 457 GISPKRPREGKASSLSSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQETRGQ*Q 278 G P R A S + R+PT P T + P TTR S + Sbjct: 95 GPGPARAPPPPAGSGGAGRTPTTAPRAPRTQRVATKA-PAAPAAETTRGRKSAQPESAAL 153 Query: 277 WSAPTAPGDHRSNSPAEGTA 218 AP + RS +PA+G A Sbjct: 154 PDAPASTAPTRSKTPAQGLA 173
>NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)| Length = 1426 Score = 28.5 bits (62), Expect = 8.6 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 10/98 (10%) Frame = -3 Query: 451 SPKRPREGKASSLSSVRSPTDGGSRPATPLPLL----RGKPEGARMATTRDLASQETRGQ 284 +P P G R P S P P+P + + P G ++ ++ AS + Q Sbjct: 457 APTEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLAASPRSPTQ 516 Query: 283 *QWSAPTAPGDHRSN-SPAEG-----TASLSRRSADLS 188 + PT+ H S SPA+ A +S ADLS Sbjct: 517 HCLARPTSQLPHGSQASPAQAQEFPLEAGISHLEADLS 554
>IF2_RHOBA (Q7URR0) Translation initiation factor IF-2| Length = 1038 Score = 28.5 bits (62), Expect = 8.6 Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Frame = -3 Query: 445 KRPREGKASSLSSVRSPT-DGGSRPATPLPLLRG------KPEGARMATTRDLASQETRG 287 + P+ A + +P DG +P LP G P G + Q T+ Sbjct: 129 RTPKLAPAPEAKAPEAPAADGSPKPEIRLPKTGGVGTGMASPSGRGIGMGAKTDGQSTKP 188 Query: 286 Q*QWSAPTAPGDHRSNSPAEGTASLSRRSADLSCS 182 + SAP+ PG + + S R SA ++ S Sbjct: 189 ESAASAPSVPGPKSDSGGRKAPESPKRESAPVASS 223
>RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB-RGS)| Length = 967 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -3 Query: 412 SSVRSPTDGGSRPATPLPLLRGKPEGARMATTRDLASQE 296 +S SP GS P T +P +G P G + L SQE Sbjct: 532 TSKDSPPGQGSSPTTEVPSCQGLPAGQESTSQDPLLSQE 570 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,468,705 Number of Sequences: 219361 Number of extensions: 886740 Number of successful extensions: 3844 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3623 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3836 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)