Clone Name | bastl32f05 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NOLA1_DROME (Q7KVQ0) H/ACA ribonucleoprotein complex subunit 1-l... | 28 | 4.0 | 2 | EGG2_SCHJA (P19469) Eggshell protein 2A precursor | 27 | 9.0 |
---|
>NOLA1_DROME (Q7KVQ0) H/ACA ribonucleoprotein complex subunit 1-like protein| (GCR 101 snRNP) Length = 237 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = -2 Query: 71 GLGGFNRDGNQSGGGGRKEARW 6 G GGFNR GGGG RW Sbjct: 216 GGGGFNRGRGGGGGGGGGRGRW 237
>EGG2_SCHJA (P19469) Eggshell protein 2A precursor| Length = 207 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -2 Query: 89 GLARAAGLGGFNRDGNQSGGGGR 21 G + G GG N +GN GGGG+ Sbjct: 165 GGGKGGGKGGGNGEGNGKGGGGK 187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,460,832 Number of Sequences: 219361 Number of extensions: 191424 Number of successful extensions: 1045 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 816 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1043 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)