ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl32f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 303 gaccatccaaaattgagcgcccagtatctgggagtgacctgccccaaggttgggagttcg 362 |||| ||||||||| |||| || | ||| ||| | ||||||||||| ||| ||||| ||| Sbjct: 19939950 gaccgtccaaaattcagcgaccgggatccgggggcgacctgccccagggtggggagatcg 19939891 Query: 363 ctccttttctagtaacgaagagggcaaactcttattc 399 ||||||||| || || | |||||| ||||||||||| Sbjct: 19939890 ctccttttcctgtgacaaggagggcgaactcttattc 19939854 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 gcggccccgcggaggagcggc 214 ||||||||||||||||||||| Sbjct: 32103912 gcggccccgcggaggagcggc 32103932 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgacgacgcgtggggccgcg 70 |||||||||||||||||||| Sbjct: 9000595 cgacgacgcgtggggccgcg 9000614
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 303 gaccatccaaaattgagcgcccagtatctgggagtgacctgccccaaggttgggagttcg 362 |||| ||||||||| |||| || | ||| ||| | ||||||||||| ||| ||||| ||| Sbjct: 117551 gaccgtccaaaattcagcgaccgggatccgggggcgacctgccccagggtggggagatcg 117492 Query: 363 ctccttttctagtaacgaagagggcaaactcttattc 399 ||||||||| || || | |||||| ||||||||||| Sbjct: 117491 ctccttttcctgtgacaaggagggcgaactcttattc 117455
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 303 gaccatccaaaattgagcgcccagtatctgggagtgacctgccccaaggttgggagttcg 362 |||| ||||||||| |||| || | ||| ||| | ||||||||||| ||| ||||| ||| Sbjct: 44071 gaccgtccaaaattcagcgaccgggatccgggggcgacctgccccagggtggggagatcg 44012 Query: 363 ctccttttctagtaacgaagagggcaaactcttattc 399 ||||||||| || || | |||||| ||||||||||| Sbjct: 44011 ctccttttcctgtgacaaggagggcgaactcttattc 43975
>dbj|AK070310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F16, full insert sequence Length = 3048 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 303 gaccatccaaaattgagcgcccagtatctgggagtgacctgccccaaggttgggagttcg 362 |||| ||||||||| |||| || | ||| ||| | ||||||||||| ||| ||||| ||| Sbjct: 395 gaccgtccaaaattcagcgaccgggatccgggggcgacctgccccagggtggggagatcg 454 Query: 363 ctccttttctagtaacgaagagggcaaactcttattc 399 ||||||||| || || | |||||| ||||||||||| Sbjct: 455 ctccttttcctgtgacaaggagggcgaactcttattc 491
>gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence Length = 226187 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcca 34 ||||||||||| ||||||||||||||| Sbjct: 4802 ccctccctcccttctcccctccctcca 4776
>dbj|AK147474.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1049I18 product:microtubule-associated protein 1 A, full insert sequence Length = 8639 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccc 30 ||||||||||||||||||||||| Sbjct: 8306 ccctccctcccatctcccctccc 8284
>gb|AC156497.2| Mus musculus BAC clone RP24-351K2 from chromosome 9, complete sequence Length = 174877 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcca 34 ||||||||||| ||||||||||||||| Sbjct: 142434 ccctccctcccttctcccctccctcca 142408
>emb|AL845466.4| Mouse DNA sequence from clone RP23-433P19 on chromosome 2, complete sequence Length = 197839 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccc 30 ||||||||||||||||||||||| Sbjct: 15754 ccctccctcccatctcccctccc 15732
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 |||||||||||||| ||||||||||| Sbjct: 195885 ccctccctcccatcacccctccctcc 195910
>gb|AC116671.14| Mus musculus chromosome 3, clone RP23-111L16, complete sequence Length = 207768 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 55220 ccctccctcccttctcccctccctcc 55195
>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence Length = 214959 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctccaccc 37 ||||||||||| ||||||||||||||||| Sbjct: 36364 ccctccctccctcctcccctccctccaccc 36335
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 ccccgcggaggagcggcggcag 219 |||||||||||||||||||||| Sbjct: 116347 ccccgcggaggagcggcggcag 116326
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 ccccgcggaggagcggcggcag 219 |||||||||||||||||||||| Sbjct: 35507 ccccgcggaggagcggcggcag 35486
>gb|AC166331.5| Mus musculus chromosome 3, clone RP23-277D9, complete sequence Length = 187537 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 53123 ccctccctcccttctcccctccctcc 53148
>gb|AC146193.3| Pan troglodytes BAC clone CH251-483N24 from Y, complete sequence Length = 232304 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 19052 ccctccctcccttctcccctccctcc 19077 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 19032 ccctccctcccttctcccctccctcc 19057
>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence Length = 275646 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 37086 ccctccctcccttctcccctccctcc 37061
>gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, complete sequence Length = 293104 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 |||||||||||||| ||||||||||| Sbjct: 45520 ccctccctcccatcccccctccctcc 45545
>gb|AC134834.3| Mus musculus BAC clone RP24-320P15 from chromosome 18, complete sequence Length = 169143 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 112505 ccctccctcccttctcccctccctcc 112530
>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete sequence Length = 170250 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 104967 ccctccctcccttctcccctccctcc 104942
>gb|AC121865.2| Mus musculus BAC clone RP24-112O1 from 8, complete sequence Length = 178620 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 155056 ccctccctcccttctcccctccctcc 155081
>gb|AC125313.2| Mus musculus BAC clone RP24-353A16 from 5, complete sequence Length = 152433 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 32718 ccctccctcccttctcccctccctcc 32743
>gb|AC009831.21| Homo sapiens chromosome , clone RP11-326K13, complete sequence Length = 179409 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 148198 ccctccctcccctctcccctccctcc 148173
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 gaccgccactgccgccagcgcc 119 |||||||||||||||||||||| Sbjct: 128408 gaccgccactgccgccagcgcc 128387
>dbj|BS000611.1| Pan troglodytes chromosome Y clone:PTB-386A09, complete sequences Length = 171989 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 169674 ccctccctcccttctcccctccctcc 169649 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 169654 ccctccctcccttctcccctccctcc 169629
>dbj|BS000596.1| Pan troglodytes chromosome Y clone:PTB-130H13, complete sequences Length = 182507 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 69589 ccctccctcccttctcccctccctcc 69564 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 69569 ccctccctcccttctcccctccctcc 69544
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 22670708 ccctccctcccttctcccctccctcc 22670733 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 22670688 ccctccctcccttctcccctccctcc 22670713
>gb|AC093845.3| Homo sapiens BAC clone RP11-454M3 from 4, complete sequence Length = 97736 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 408 tggaaagtgaaatggaaaaaggaaga 433 |||||| ||||||||||||||||||| Sbjct: 70396 tggaaactgaaatggaaaaaggaaga 70421
>gb|AC151479.4| Pan troglodytes BAC clone CH251-656P8 from chromosome y, complete sequence Length = 179557 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 84775 ccctccctcccttctcccctccctcc 84800 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 84755 ccctccctcccttctcccctccctcc 84780
>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217586 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 |||||||||||||| ||||||||||| Sbjct: 107344 ccctccctcccatcacccctccctcc 107319
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 ccccgcggaggagcggcggcag 219 |||||||||||||||||||||| Sbjct: 14700053 ccccgcggaggagcggcggcag 14700032
>gb|AC007284.4|AC007284 Homo sapiens BAC clone RP11-558K21 from Y, complete sequence Length = 171449 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 138703 ccctccctcccttctcccctccctcc 138678 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 138683 ccctccctcccttctcccctccctcc 138658 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 138663 ccctccctcccttctcccctccctcc 138638
>gb|AF203698.1|AF203698 Rattus norvegicus T calcium channel alpha1G subunit (Cacna1g) gene, partial cds Length = 4171 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 tcccatctcccctccctccacc 36 |||||||||||||||||||||| Sbjct: 1823 tcccatctcccctccctccacc 1802
>gb|AC139351.4| Mus musculus BAC clone RP24-156K15 from 8, complete sequence Length = 190998 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 23244 ccctccctcccttctcccctccctcc 23269
>gb|AC165340.3| Mus musculus BAC clone RP24-63G4 from chromosome 7, complete sequence Length = 241077 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctccaccc 37 ||||||||||| ||||||||||||||||| Sbjct: 41990 ccctccctccctcctcccctccctccaccc 42019
>emb|AL596446.11| Mouse DNA sequence from clone RP23-386E10 on chromosome 11, complete sequence Length = 191735 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 52568 ccctccctcccttctcccctccctcc 52543
>emb|AL670223.7| Mouse DNA sequence from clone RP23-29O24 on chromosome 4, complete sequence Length = 184644 Score = 44.1 bits (22), Expect = 0.39 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 8 ccctccctcccatctcc-cctccctccacc 36 ||||||||||||||||| |||||||||||| Sbjct: 53867 ccctccctcccatctcctcctccctccacc 53838
>emb|AL670319.4| Mouse DNA sequence from clone RP23-315E18 on chromosome 4, complete sequence Length = 40107 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctcc 33 ||||||||||| |||||||||||||| Sbjct: 37435 ccctccctcccttctcccctccctcc 37410
>gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226417 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctc 32 ||||||||||| ||||||||||||| Sbjct: 205805 ccctccctcccttctcccctccctc 205829
>ref|XM_467923.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 gcggccccgcggaggagcggc 214 ||||||||||||||||||||| Sbjct: 152 gcggccccgcggaggagcggc 132
>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0066C04, complete sequence Length = 133944 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 132729 cgcggaggagcggcggcagcg 132709
>gb|AC145326.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076C23 map near C53961S, complete sequence Length = 11139 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 5628 cgcggaggagcggcggcagcg 5608
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 98 gaccgccactgccgccagcgccggtgacc 126 ||||| |||||||| |||||||||||||| Sbjct: 3923398 gaccggcactgccggcagcgccggtgacc 3923426
>ref|NM_001008712.1| Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 3, mRNA Length = 1438 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 cctccctcccatctcccctccctcc 33 |||||||||| |||||||||||||| Sbjct: 73 cctccctcccctctcccctccctcc 49
>ref|NM_001008711.1| Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 2, mRNA Length = 3034 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 cctccctcccatctcccctccctcc 33 |||||||||| |||||||||||||| Sbjct: 73 cctccctcccctctcccctccctcc 49
>ref|NM_001008710.1| Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 1, mRNA Length = 2948 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 cctccctcccatctcccctccctcc 33 |||||||||| |||||||||||||| Sbjct: 73 cctccctcccctctcccctccctcc 49
>ref|NM_006867.2| Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 4, mRNA Length = 3154 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 cctccctcccatctcccctccctcc 33 |||||||||| |||||||||||||| Sbjct: 73 cctccctcccctctcccctccctcc 49
>gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosome 19, complete sequence Length = 207191 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 ctccctcccatctcccctccc 30 ||||||||||||||||||||| Sbjct: 40906 ctccctcccatctcccctccc 40926
>gb|AC109329.8| Homo sapiens chromosome 8, clone CTD-3107M8, complete sequence Length = 215644 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 cctccctcccatctcccctccctcc 33 |||||||||| |||||||||||||| Sbjct: 149531 cctccctcccctctcccctccctcc 149507
>ref|XM_811457.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508387.160) partial mRNA Length = 2319 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 cgccactgccgccagcgccgg 121 ||||||||||||||||||||| Sbjct: 2180 cgccactgccgccagcgccgg 2200
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence Length = 247394 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccctc 32 ||||||||||| ||||||||||||| Sbjct: 156732 ccctccctcccttctcccctccctc 156756
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 98 gaccgccactgccgccagcgccggtgacc 126 ||||| |||||||| |||||||||||||| Sbjct: 112389 gaccggcactgccggcagcgccggtgacc 112417
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 98 gaccgccactgccgccagcgccggtgacc 126 ||||| |||||||| |||||||||||||| Sbjct: 124116 gaccggcactgccggcagcgccggtgacc 124144
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 106033 cgcggaggagcggcggcagcg 106053
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 ccgccactgccgccagcgccg 120 ||||||||||||||||||||| Sbjct: 952274 ccgccactgccgccagcgccg 952254
>emb|BX890609.7| Zebrafish DNA sequence from clone DKEY-56E5, complete sequence Length = 228713 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 cacccctccctcccatctccc 25 ||||||||||||||||||||| Sbjct: 139111 cacccctccctcccatctccc 139131
>gb|AC156505.6| Mus musculus 10 BAC RP24-270N22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190789 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 cctccctcccatctcccctccctcc 33 |||||||||| |||||||||||||| Sbjct: 60147 cctccctcccttctcccctccctcc 60171
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 25888623 cgcggaggagcggcggcagcg 25888643
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 11614997 cgcggaggagcggcggcagcg 11615017
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 10329072 cgcggaggagcggcggcagcg 10329092 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgcggaggagcggcggcagc 220 |||||||||||||||||||| Sbjct: 22063590 cgcggaggagcggcggcagc 22063571 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gaaagtgaaatggaaaaagg 429 |||||||||||||||||||| Sbjct: 19528648 gaaagtgaaatggaaaaagg 19528667
>gb|AC008089.3|AC008089 Drosophila melanogaster, chromosome 3R, region 86C-86C, BAC clone BACR29B06, complete sequence Length = 179669 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 cattatggaaagtgaaatgga 423 ||||||||||||||||||||| Sbjct: 5185 cattatggaaagtgaaatgga 5205
>gb|AC007822.4|AC007822 Drosophila melanogaster, chromosome 3R, region 86C-86C, BAC clone BACR02E04, complete sequence Length = 157607 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 cattatggaaagtgaaatgga 423 ||||||||||||||||||||| Sbjct: 56655 cattatggaaagtgaaatgga 56675
>dbj|AP006584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1197G05 Length = 130823 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 36609 cgcggaggagcggcggcagcg 36629
>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0649C11 Length = 138870 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 133299 cgcggaggagcggcggcagcg 133319
>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0486G03 Length = 146713 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 gcggccccgcggaggagcggc 214 ||||||||||||||||||||| Sbjct: 40568 gcggccccgcggaggagcggc 40588
>dbj|AK099679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070O18, full insert sequence Length = 2856 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 59 cgcggaggagcggcggcagcg 39
>dbj|AK072585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133I16, full insert sequence Length = 2523 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 85 cgcggaggagcggcggcagcg 65
>dbj|AK072373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065D01, full insert sequence Length = 3109 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 87 cgcggaggagcggcggcagcg 67
>dbj|AK068344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149L20, full insert sequence Length = 1354 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 gcggccccgcggaggagcggc 214 ||||||||||||||||||||| Sbjct: 153 gcggccccgcggaggagcggc 133
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 62 ggggccgcgaccgccggcggccgcgccga 90 ||||||| ||| ||||||||||||||||| Sbjct: 1736530 ggggccgagacggccggcggccgcgccga 1736502
>dbj|AK062650.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E06, full insert sequence Length = 529 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 75 cgcggaggagcggcggcagcg 55
>gb|AE003687.3| Drosophila melanogaster chromosome 3R, section 25 of 118 of the complete sequence Length = 260168 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 cattatggaaagtgaaatgga 423 ||||||||||||||||||||| Sbjct: 237615 cattatggaaagtgaaatgga 237635
>dbj|AP004109.1| Salangichthys microdon mitochondrial DNA, complete genome Length = 16598 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cctcccatctcccctccctcc 33 ||||||||||||||||||||| Sbjct: 3619 cctcccatctcccctccctcc 3639
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 11694186 cgcggaggagcggcggcagcg 11694206
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgcggaggagcggcggcagcg 221 ||||||||||||||||||||| Sbjct: 14885 cgcggaggagcggcggcagcg 14905
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence Length = 230313 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccctc 32 ||||||||||| ||||||||||||| Sbjct: 81074 ccctccctcccttctcccctccctc 81050
>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence Length = 206555 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctc 28 ||||||||||||||||||||| Sbjct: 16602 ccctccctcccatctcccctc 16582
>ref|XM_523706.1| PREDICTED: Pan troglodytes similar to nuclear receptor subfamily 2, group F, member 6; ERBA-related gene-2; v-erb-a avian erythroblastic leukemia viral oncogene homolog-like 2 (LOC468317), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccactgccgccagcgccg 120 |||||||||||||||||||| Sbjct: 375 cgccactgccgccagcgccg 356
>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence Length = 265797 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccct 31 ||||||||||| |||||||||||| Sbjct: 19348 ccctccctcccttctcccctccct 19371
>ref|XM_641935.1| Dictyostelium discoideum hypothetical protein (DDB0190093), partial mRNA Length = 3174 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 406 tatggaaagtgaaatggaaaaagg 429 ||||||||||||| |||||||||| Sbjct: 2889 tatggaaagtgaattggaaaaagg 2912
>ref|XM_464884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgacgacgcgtggggccgcg 70 |||||||||||||||||||| Sbjct: 437 cgacgacgcgtggggccgcg 456
>gb|BC084544.1| Homo sapiens cDNA clone IMAGE:4591955, partial cds Length = 1814 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccactgccgccagcgccg 120 |||||||||||||||||||| Sbjct: 563 cgccactgccgccagcgccg 544
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 cccagctcagtgcgcgcgacgacg 58 ||||| |||||||||||||||||| Sbjct: 1925646 cccaggtcagtgcgcgcgacgacg 1925669
>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02 map C8, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 cgcacccctccctcccatctcccctccc 30 |||||||||||||| |||||| |||||| Sbjct: 75868 cgcacccctccctctcatctctcctccc 75895
>ref|XM_600248.2| PREDICTED: Bos taurus similar to Tripartite motif protein 32 (Zinc-finger protein HT2A) (72 kDa Tat-interacting protein) (LOC521975), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgcggaggagcggcggcag 219 |||||||||||||||||||| Sbjct: 422 ccgcggaggagcggcggcag 441
>gb|AC120788.7| Mus musculus chromosome 14, clone RP23-279B13, complete sequence Length = 215810 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcccatctcccctccctcc 33 |||||||||||||||||||| Sbjct: 6954 ctcccatctcccctccctcc 6973
>ref|NM_005234.3| Homo sapiens nuclear receptor subfamily 2, group F, member 6 (NR2F6), mRNA Length = 1804 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccactgccgccagcgccg 120 |||||||||||||||||||| Sbjct: 587 cgccactgccgccagcgccg 568
>gb|AC093086.4| Homo sapiens BAC clone RP11-746B14 from 7, complete sequence Length = 64601 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 cccctccctcccatctcccctccc 30 |||||||||||| ||||||||||| Sbjct: 14111 cccctccctcccctctcccctccc 14134
>gb|BC063018.1| Homo sapiens nuclear receptor subfamily 2, group F, member 6, mRNA (cDNA clone IMAGE:5228022), partial cds Length = 1783 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccactgccgccagcgccg 120 |||||||||||||||||||| Sbjct: 527 cgccactgccgccagcgccg 508
>gb|AC112504.6| Homo sapiens 3 BAC RP11-271K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215077 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tcccatctcccctccctcca 34 |||||||||||||||||||| Sbjct: 157204 tcccatctcccctccctcca 157185
>gb|BC002669.2| Homo sapiens nuclear receptor subfamily 2, group F, member 6, mRNA (cDNA clone IMAGE:3608765), partial cds Length = 1821 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccactgccgccagcgccg 120 |||||||||||||||||||| Sbjct: 587 cgccactgccgccagcgccg 568
>ref|XM_665108.1| Plasmodium berghei strain ANKA hypothetical protein (PB300922.00.0) partial mRNA Length = 687 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 atcattatggaaagtgaaat 420 |||||||||||||||||||| Sbjct: 264 atcattatggaaagtgaaat 245
>emb|AL390785.15| Human DNA sequence from clone RP11-325N9 on chromosome 10, complete sequence Length = 203169 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 caaactcttattccatcatt 406 |||||||||||||||||||| Sbjct: 11595 caaactcttattccatcatt 11576
>gb|AC091091.2| Gallus gallus clone WAG-93J15, complete sequence Length = 136822 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gccccgcggaggagcggcgg 216 |||||||||||||||||||| Sbjct: 8126 gccccgcggaggagcggcgg 8145
>gb|AC079271.4| Homo sapiens chromosome 10 clone RP11-455I1, complete sequence Length = 200476 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 caaactcttattccatcatt 406 |||||||||||||||||||| Sbjct: 165439 caaactcttattccatcatt 165420
>emb|AL133347.28| Human DNA sequence from clone RP1-274L14 on chromosome 6q25.2-26 Contains part of a novel gene, a signal recognition particle 72kD (SRP72) pseudogene and three CpG islands, complete sequence Length = 100732 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ggaaagtgaaatggaaaaag 428 |||||||||||||||||||| Sbjct: 31233 ggaaagtgaaatggaaaaag 31252
>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence Length = 180338 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcccatctcccctccctcc 33 |||||||||||||||||||| Sbjct: 165615 ctcccatctcccctccctcc 165634
>emb|X12794.1|HSEAR2 Human v-erbA related ear-2 gene Length = 2380 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccactgccgccagcgccg 120 |||||||||||||||||||| Sbjct: 1167 cgccactgccgccagcgccg 1148
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccggcggccgcgccgacg 92 |||||||||||||||||||| Sbjct: 12854 cgccggcggccgcgccgacg 12835
>emb|AJ438039.1|RLE438039 Rhizobium leguminosarum bv. phaseoli panB (partial), oxyR and katG genes Length = 4754 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgccggcggccgcgccgacg 92 |||||||||||||||||||| Sbjct: 2410 cgccggcggccgcgccgacg 2429
>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence Length = 198202 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tggctgactggcttccgccccacc 279 ||||| |||||||||||||||||| Sbjct: 181775 tggctcactggcttccgccccacc 181752
>emb|AL672010.8| Mouse DNA sequence from clone RP23-223C15 on chromosome 11 Contains three novel genes and a CpG island, complete sequence Length = 193223 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 cccctccctcccatctcccctccc 30 |||||||| ||||||||||||||| Sbjct: 32695 cccctcccccccatctcccctccc 32672
>emb|CR352330.14| Mouse DNA sequence from clone RP23-374F1 on chromosome X, complete sequence Length = 82726 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccct 31 ||||||||||||||||||| |||| Sbjct: 80300 ccctccctcccatctccccaccct 80323
>emb|CR932802.1| Mus musculus chromosome 2, clone GenSys-198F12 strain 129/Sv, complete sequence Length = 99647 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccccgcggaggagcggcggcagc 220 ||||| |||||||||||||||||| Sbjct: 79082 gccccacggaggagcggcggcagc 79059
>emb|CR932799.1| Mus musculus chromosome 2, clone RPCI-22-207E02 strain 129/Sv, complete sequence Length = 151675 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccccgcggaggagcggcggcagc 220 ||||| |||||||||||||||||| Sbjct: 24341 gccccacggaggagcggcggcagc 24318
>emb|BX572627.5| Zebrafish DNA sequence from clone CH211-222M21 in linkage group 9, complete sequence Length = 209758 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 cccctccctcccatctcccctccc 30 |||||||||| ||||||||||||| Sbjct: 115979 cccctccctctcatctcccctccc 116002
>gb|AE011996.1| Xanthomonas axonopodis pv. citri str. 306, section 374 of 469 of the complete genome Length = 10994 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gccgcgaccgccggcggccg 84 |||||||||||||||||||| Sbjct: 1166 gccgcgaccgccggcggccg 1185
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgccggcggccgcgccgacg 92 |||||||||||||||||||| Sbjct: 4074 cgccggcggccgcgccgacg 4093
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 accgcgtcaacgaggggaga 187 |||||||||||||||||||| Sbjct: 373728 accgcgtcaacgaggggaga 373709
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 cgcacccctccctcccatctcccctccc 30 |||||||||||||| |||||| |||||| Sbjct: 44608 cgcacccctccctctcatctctcctccc 44635
>gb|AC093895.3| Homo sapiens BAC clone RP11-716M23 from 4, complete sequence Length = 171135 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 cccctccctcccatctcccctccc 30 ||||||||| |||||||||||||| Sbjct: 98121 cccctcccttccatctcccctccc 98098
>gb|AC093800.2| Homo sapiens BAC clone RP11-312J17 from 4, complete sequence Length = 161370 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 cctccctcccatctcccctccctc 32 |||||||||| ||||||||||||| Sbjct: 87364 cctccctcccttctcccctccctc 87341
>emb|BX601647.4| Zebrafish DNA sequence from clone DKEY-19N10 in linkage group 9, complete sequence Length = 100697 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 cccctccctcccatctcccctccc 30 |||||||||| ||||||||||||| Sbjct: 92977 cccctccctctcatctcccctccc 93000
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgaccgccggcggccgcgcc 88 |||||||||||||||||||| Sbjct: 3786955 cgaccgccggcggccgcgcc 3786936
>gb|AC010646.5| Homo sapiens chromosome 19 clone LLNLR-277B12, complete sequence Length = 41461 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccactgccgccagcgccg 120 |||||||||||||||||||| Sbjct: 26334 cgccactgccgccagcgccg 26353
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccgacgaacgggaccgcc 104 |||||||||||||||||||| Sbjct: 1375376 cgccgacgaacgggaccgcc 1375357
>gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183931 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 ccctccctcccatctcccctccct 31 ||||||||||| |||||||||||| Sbjct: 148207 ccctccctcccttctcccctccct 148230
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 cgcacccctccctcccatctcccctccc 30 |||||||||||||| |||||| |||||| Sbjct: 7219250 cgcacccctccctctcatctctcctccc 7219277
>gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, complete sequence Length = 94576 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tggctgactggcttccgccccacc 279 ||||| |||||||||||||||||| Sbjct: 24704 tggctcactggcttccgccccacc 24681
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgccggcggccgcgccgacg 92 |||||||||||||||||||| Sbjct: 2898057 cgccggcggccgcgccgacg 2898038
>gb|AF126956.1|AF126956 Streptomyces coelicolor ferric uptake regulator homolog (furA) and catalase-peroxidase (catC) genes, complete cds Length = 3027 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgccggcggccgcgccgacg 92 |||||||||||||||||||| Sbjct: 1336 cgccggcggccgcgccgacg 1355
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgcggaggagcggcggcagc 220 |||||||||||||||||||| Sbjct: 101463 cgcggaggagcggcggcagc 101444
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gaaagtgaaatggaaaaagg 429 |||||||||||||||||||| Sbjct: 10380 gaaagtgaaatggaaaaagg 10399
>emb|BX571892.9| Mouse DNA sequence from clone RP23-207B21 on chromosome 2, complete sequence Length = 170046 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 gccccgcggaggagcggcggcagc 220 ||||| |||||||||||||||||| Sbjct: 54658 gccccacggaggagcggcggcagc 54635
>gb|AE005057.1| Halobacterium sp. NRC-1 section 88 of 170 of the complete genome Length = 15836 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ccaccgaacgccctaggtgt 294 |||||||||||||||||||| Sbjct: 6227 ccaccgaacgccctaggtgt 6246
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgacgacgcgtggggccgcg 70 |||||||||||||||||||| Sbjct: 41041 cgacgacgcgtggggccgcg 41060
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgacgacgcgtggggccgcg 70 |||||||||||||||||||| Sbjct: 73204 cgacgacgcgtggggccgcg 73223
>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete sequence Length = 177152 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tggctgactggcttccgccccacc 279 ||||| |||||||||||||||||| Sbjct: 163988 tggctcactggcttccgccccacc 163965
>emb|AJ504410.1|TRU504410 Takifugu rubripes egln1 gene (partial), trax gene and disc1 gene Length = 44904 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 6 acccctccctcccatctcccctccctcc 33 ||||||||||||||| ||||||||||| Sbjct: 26405 acccctccctcccataacccctccctcc 26378
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gaccgccactgccgccagcg 117 |||||||||||||||||||| Sbjct: 3318599 gaccgccactgccgccagcg 3318618
>gb|AC102033.9| Mus musculus chromosome 15, clone RP23-86G8, complete sequence Length = 202269 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccct 31 ||||||||||||||| |||||||| Sbjct: 60588 ccctccctcccatcttccctccct 60565
>dbj|AP003097.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-12D16, complete sequence Length = 106773 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 aactcttattccatcattat 408 |||||||||||||||||||| Sbjct: 55985 aactcttattccatcattat 56004
>gb|U72333.1|HSLIS01 Human platelet activating factor acetylhydrolase, brain isoform, 45 kDa subunit (LIS1) gene, exon 1 Length = 2777 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 cccctccctcccatctcccctccc 30 |||||||||||||| ||||||||| Sbjct: 465 cccctccctcccatttcccctccc 488
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 cgcacccctccctcccatctcccctccc 30 |||||||||||||| |||||| |||||| Sbjct: 7222546 cgcacccctccctctcatctctcctccc 7222573
>gb|AC005594.1|AC005594 Homo sapiens chromosome 19, cosmid R26894, complete sequence Length = 39514 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcccatctcccctccctcc 33 |||||||||||||||||||| Sbjct: 8759 ctcccatctcccctccctcc 8778
>gb|AC148987.3| Mus musculus BAC clone RP24-322F4 from 6, complete sequence Length = 222379 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 tccctcccatctcccctccctcca 34 |||||||| ||||||||||||||| Sbjct: 6150 tccctcccttctcccctccctcca 6127
>gb|AF038569.1|AF038569 Schistocerca americana embryonic hemolymph protein precursor, mRNA, complete cds Length = 2307 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgcgaccgcgtcaacgaggg 183 |||||||||||||||||||| Sbjct: 415 cgcgaccgcgtcaacgaggg 434
>gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complete sequence Length = 188083 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ctctacttctcttcatcccc 246 |||||||||||||||||||| Sbjct: 161341 ctctacttctcttcatcccc 161322
>gb|AC124587.5| Mus musculus BAC clone RP23-132G24 from 1, complete sequence Length = 220046 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 ccctccctcccatctcccctccct 31 ||||||||||| |||||||||||| Sbjct: 70935 ccctccctcccttctcccctccct 70912
>dbj|AP000729.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-699D4, complete sequence Length = 160535 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 ctccctcccatctcccctccctcc 33 ||||||||| |||||||||||||| Sbjct: 102010 ctccctcccttctcccctccctcc 101987
>emb|AL845257.2| Mouse DNA sequence from clone RP23-280K4 on chromosome 2, complete sequence Length = 169281 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctcccctccctccacccag 39 |||||||||||||||||||| Sbjct: 162543 tctcccctccctccacccag 162562
>gb|M21628.1|HSBGLYB Bovine herpesvirus type 2 glycoprotein B gene, complete cds Length = 9388 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 ctcgggcggccccgcggagg 208 |||||||||||||||||||| Sbjct: 4663 ctcgggcggccccgcggagg 4682 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,025,011 Number of Sequences: 3902068 Number of extensions: 4025011 Number of successful extensions: 107478 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 105576 Number of HSP's gapped (non-prelim): 1903 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
