ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl32e08 |
|---|---|
| Clone Library Name | barley_pub |
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 35.0 bits (79), Expect = 0.077 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 258 PP S P A PP P PP P LA ++ CGS+AS P Sbjct: 434 PPTSGPAAPPPPPPPPPPPPPPPLPPPPLPPLASLSHCGSQASPP 478
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 32.3 bits (72), Expect = 0.50 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -2 Query: 425 PSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTH 312 PS++ LPPR+A PP P RP RPP+H Sbjct: 563 PSRYQSGPNSLPPRAATPTRPPSRPP---SRPSRPPSH 597
>SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 580 Score = 26.6 bits (57), Expect(2) = 0.58 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -2 Query: 221 VTHSLADFDFHDHRP 177 +THSL +F DHRP Sbjct: 231 ITHSLCTLEFEDHRP 245 Score = 24.3 bits (51), Expect(2) = 0.58 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 78 LPKMAHLEHPIPWHGSPKQPSHP 10 LP +HL P+ G P++PS P Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQP 278
>SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 580 Score = 26.6 bits (57), Expect(2) = 0.58 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -2 Query: 221 VTHSLADFDFHDHRP 177 +THSL +F DHRP Sbjct: 231 ITHSLCTLEFEDHRP 245 Score = 24.3 bits (51), Expect(2) = 0.58 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 78 LPKMAHLEHPIPWHGSPKQPSHP 10 LP +HL P+ G P++PS P Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQP 278
>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)| Length = 1285 Score = 32.0 bits (71), Expect = 0.65 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -2 Query: 425 PSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTH 312 PS++ LPPR+A PP P RP RPP+H Sbjct: 533 PSRYQSGPNSLPPRAATHTRPPSRPP---SRPSRPPSH 567
>NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)| Length = 1426 Score = 32.0 bits (71), Expect = 0.65 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -2 Query: 392 PPRSAPTA--APPGLAPRVLQRPPRPPTHRGMALAQMA 285 P R PT+ +PP PRVL P P G++++Q+A Sbjct: 471 PSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLA 508
>RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 609 Score = 31.6 bits (70), Expect = 0.85 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 258 P AP +APP P+ + PP P +RG +++ G GS + P Sbjct: 127 PAAPAPASAPPPSKPQNISAPPPPSMNRG--ASKLFGGGSVVNTP 169
>PP2BB_HUMAN (P16298) Serine/threonine-protein phosphatase 2B catalytic subunit| beta isoform (EC 3.1.3.16) (Calmodulin-dependent calcineurin A subunit beta isoform) (CAM-PRP catalytic subunit) Length = 524 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRPPTHR 309 PP P PPG A RV++ P PPTHR Sbjct: 11 PPPPPPPPPPPG-ADRVVKAVPFPPTHR 37
>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)| Length = 1161 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = +1 Query: 298 SAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSS 399 S MP+ GG GG GA GA G GGSS Sbjct: 5 SRMPKSEGGSGGGAAGGGAGGAGAGAGCGSGGSS 38
>BCCP_ARATH (Q42533) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor (BCCP) Length = 280 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -2 Query: 428 RPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMAL----AQMAGCGSRASA 261 +P++ S+ + PP +AP AA P + PP PPT +L + MAG R+ A Sbjct: 161 QPNQPSYAQQMAPP-AAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPMAGTFYRSPA 219 Query: 260 P 258 P Sbjct: 220 P 220
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2157 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRPP 318 PP + T APP P+ L PP PP Sbjct: 511 PPAAPSTPAPPPAVPKELPAPPAPP 535
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 30.4 bits (67), Expect = 1.9 Identities = 23/80 (28%), Positives = 31/80 (38%) Frame = +1 Query: 154 GCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAEARDPHPAIWASAMPR*VGGRGG 333 G W TAGR SA +T LP P+ R P + +++ +G Sbjct: 436 GLWGHGTAGRERCSQDSASPASSTGLPEGSEPE-SSCCPRTPEDGVDSASPSAQIGAERK 494 Query: 334 RCKTRGASPGGAAVGADLGG 393 + G PG GA LGG Sbjct: 495 AGGSLGEDPGLCIDGAGLGG 514
>PGMI_AERPE (Q9YE01) Bifunctional phosphoglucose/phosphomannose isomerase| (Glucose-6-phosphate isomerase) (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Mannose-6-phosphate isomerase) (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) Length = 335 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 11/46 (23%) Frame = -2 Query: 368 APPGLAPRVLQ--RPPRPPTHR--GMALAQMAG-------CGSRAS 264 AP G RV++ RPPRPP HR G+ LA +G CGS S Sbjct: 57 APQGPEFRVVKDFRPPRPPRHRGYGLVLASYSGNTLETVECGSLLS 102
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 30.4 bits (67), Expect = 1.9 Identities = 19/41 (46%), Positives = 21/41 (51%) Frame = -3 Query: 397 YYHQDLHRRPLRPGSRPGFCSGRRALLLIGAWRSPRWPGVG 275 +YH H P RPG PG C R L+ GA SP PG G Sbjct: 528 HYHFS-HGSPRRPGPEPGACDTR--LVRAGAPPSPPSPGRG 565
>TOM40_HUMAN (O96008) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) (Haymaker protein) (p38.5) Length = 361 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -2 Query: 398 LLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG 282 +L S P PP AP ++ PP PP+ G L + G Sbjct: 4 VLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGG 42
>DS_DROME (Q24292) Protein dachsous precursor (Adherin)| Length = 3503 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Frame = -2 Query: 392 PPRSAPTAAPPGL----APRVLQRPPRPPTHRGMALAQM 288 PP + PT PP L APR + P R P H +A A + Sbjct: 3393 PPSAPPTHIPPPLLTNVAPRAINLPMRLPPHLSLAPAHL 3431
>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 30.0 bits (66), Expect = 2.5 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 6/55 (10%) Frame = -2 Query: 392 PPRSAPTAAPPGLAP-RVLQRPPRPPTHR-----GMALAQMAGCGSRASAPSIFG 246 PP APTAAPP P R P PP +R AL A G PS+ G Sbjct: 313 PPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLG 367
>CRTI_PHYBL (P54982) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene| desaturase) Length = 583 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = -2 Query: 425 PSKFSFEYLLLPPRSAPTAAPPG 357 PS+ SF Y+ LP R PTAAPPG Sbjct: 351 PSELSF-YVNLPSRIDPTAAPPG 372
>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 812 Score = 30.0 bits (66), Expect = 2.5 Identities = 18/55 (32%), Positives = 22/55 (40%) Frame = +1 Query: 103 PEAGLRCPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAE 267 P AGL R P K W T R W+ + K+C T AP+ G E Sbjct: 424 PNAGLTMNYCRNPDADKSPWCYTTDPRVRWEFCNLKKCSETPEQVPAAPQAPGVE 478
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 7/39 (17%) Frame = -2 Query: 401 LLLPPRSAPTAA-------PPGLAPRVLQRPPRPPTHRG 306 L LPP +P A PPG AP + PP P RG Sbjct: 293 LTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPGLKRG 331
>CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)| (Ik3-1) Length = 568 Score = 30.0 bits (66), Expect = 2.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 383 SAPTAAPPGLAPRVLQRPPRPP 318 S+P PP L PRVL P +PP Sbjct: 123 SSPCPLPPSLVPRVLGEPSQPP 144
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 30.0 bits (66), Expect = 2.5 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 Query: 401 LLLPPRSAPTAAPPGLAPRVLQRPPRPP 318 LLLPP S+P PP AP+ PP P Sbjct: 1033 LLLPPASSPPPPPPPPAPQRRATPPLAP 1060 Score = 28.9 bits (63), Expect = 5.5 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 14/64 (21%) Frame = -2 Query: 407 EYLLLPPRSAPTAAP-----------PGLA---PRVLQRPPRPPTHRGMALAQMAGCGSR 270 E+ L PP +PT++P PGL P + PPR P A AG Sbjct: 939 EHFLPPPARSPTSSPGQLGQPPGELSPGLGSGPPGTPETPPRQPERLPFAAGASAGASPV 998 Query: 269 ASAP 258 A +P Sbjct: 999 AFSP 1002
>TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) (p144) (Formin-binding protein 28) (FBP 28) Length = 1100 Score = 29.6 bits (65), Expect = 3.2 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 Query: 395 LPPRSAPTAAPPGLAPRVLQRPPRPPTHRG 306 +PP P PP + P LQRPP P G Sbjct: 76 MPPMPPPGGIPPPMGPPHLQRPPFMPPPMG 105
>PAR3L_HUMAN (Q8TEW8) Amyotrophic lateral sclerosis 2 chromosome region candidate| gene 19 protein (Partitioning-defective 3-like protein) (PAR3-L protein) (PAR3-beta) Length = 1205 Score = 29.6 bits (65), Expect = 3.2 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Frame = -2 Query: 428 RPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG-CGSRASAP 258 RP++ L P P AP P PP PP H+ M Q G G R +P Sbjct: 1128 RPTELRVADLRYPQHYPPPPAPQHKGPFRQDVPPSPPQHQRMPAYQETGRPGPRGGSP 1185
>FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)| Length = 685 Score = 29.6 bits (65), Expect = 3.2 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Frame = -2 Query: 392 PPRSAPTAAPPGLAP---RVLQRPP--RPPTHRGMALAQMAGCGSRASAP 258 PPR P PPG P RPP RPP HRG G G A+AP Sbjct: 163 PPRRLPPPPPPGEQPPSGSGHSRPPGARPP-HRG---GSSRGSGDAAAAP 208
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 9/45 (20%) Frame = -2 Query: 389 PRSAPTAAPPGLAPRVLQR---------PPRPPTHRGMALAQMAG 282 P + PT PP P LQ+ PP PP ALA +AG Sbjct: 212 PPAGPTGLPPPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAG 256
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 29.3 bits (64), Expect = 4.2 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Frame = -2 Query: 389 PRSAPTAAPPGLAPRVLQ-----RPPRPPTHRGMALAQMAGCGSR 270 P P A PP LAPR LQ PP P H A QM+ G+R Sbjct: 811 PLMPPPAKPPMLAPRKLQPSAQFAPPPSPIHH-HAGVQMSAPGNR 854
>PP2BB_RAT (P20651) Serine/threonine-protein phosphatase 2B catalytic subunit| beta isoform (EC 3.1.3.16) (Calmodulin-dependent calcineurin A subunit beta isoform) (CAM-PRP catalytic subunit) Length = 525 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%) Frame = -2 Query: 392 PPRSAPTAAPPGLAP----RVLQRPPRPPTHR 309 P R+AP PP P RV++ P PPTHR Sbjct: 6 PARAAPPPPPPPPPPLGADRVVKAVPFPPTHR 37
>PP2BB_MOUSE (P48453) Serine/threonine-protein phosphatase 2B catalytic subunit| beta isoform (EC 3.1.3.16) (Calmodulin-dependent calcineurin A subunit beta isoform) (CAM-PRP catalytic subunit) Length = 525 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%) Frame = -2 Query: 392 PPRSAPTAAPPGLAP----RVLQRPPRPPTHR 309 P R+AP PP P RV++ P PPTHR Sbjct: 6 PARAAPPPPPPPPPPLGADRVVKAVPFPPTHR 37
>HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)| Length = 339 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIF 249 P S+ + A PG L P TH G A A A + A+A S F Sbjct: 23 PASSSSSVAAPGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAASTF 70
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 29.3 bits (64), Expect = 4.2 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -2 Query: 395 LPPRSAPTAAPPG-LAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPS 255 +PP SAP +PPG +AP+ PT +A GS +S+PS Sbjct: 249 IPPSSAPMTSPPGSMAPKSSSPVSNSPT----VSPSLAPGGSTSSSPS 292
>FOXD1_CHICK (Q98937) Forkhead box protein D1 (Brain factor-2) (HFH-BF-2)| (CBF-2) (T-14-6) Length = 440 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -2 Query: 416 FSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPP 318 F+F + PPR P AAP G L PP PP Sbjct: 296 FAFHHPSPPPRQ-PPAAPAGAPAAALPPPPPPP 327
>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2| Length = 924 Score = 28.9 bits (63), Expect = 5.5 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Frame = +1 Query: 277 PHPAIWASAM-PR*---VGGRGGRCKTRGAS-PGGAAVGADLGGSSKYSNENFEG 426 P P+ S+M PR VGG G R G PGG GA +GG S N+ G Sbjct: 198 PRPSASPSSMSPRPGGAVGGGGPRPPRTGVPRPGGGRPGAPVGGRSDAGGGNYRG 252 Score = 28.1 bits (61), Expect = 9.4 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = +1 Query: 232 PNQLAPKMDGAEARD-PHPAIWASAMPR*VGGR-----GGRCKTRGASPGGAAVGADLGG 393 P+ ++P+ GA P P + +PR GGR GGR G + G VGA GG Sbjct: 204 PSSMSPRPGGAVGGGGPRPP--RTGVPRPGGGRPGAPVGGRSDAGGGNYRGGGVGALPGG 261 Query: 394 SS 399 S Sbjct: 262 GS 263
>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) Length = 1098 Score = 28.9 bits (63), Expect = 5.5 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 Query: 395 LPPRSAPTAAPPGLAPRVLQRPPRPP 318 +PP P PP + P LQRPP P Sbjct: 76 MPPMPPPGGIPPPMGPPHLQRPPFMP 101
>EXPA_DROME (Q07436) Protein expanded| Length = 1427 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -2 Query: 404 YLLLP-PRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIFGAS 240 Y+ LP P +P +P + PP PP ALA A G+ +S+ S+F S Sbjct: 1124 YVQLPGPGYSPLYSPSMASLCSSYEPPPPPPLHPAALAAAAAAGAGSSSSSMFARS 1179
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/41 (43%), Positives = 20/41 (48%) Frame = +1 Query: 295 ASAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSSKYSNEN 417 A+A GG GG G GGA GA+L SS Y EN Sbjct: 241 AAASAAAAGGGGGG----GLGVGGAPAGAELDDSSDYHEEN 277
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 Query: 121 CPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTT 225 C PRTHK C S + SWK+ KEC T Sbjct: 1452 CSHLHKPRTHKACRSGRCP---SWKANKWKECSVT 1483
>PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7.11.1)| Length = 543 Score = 28.9 bits (63), Expect = 5.5 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -2 Query: 428 RPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCG 276 +P +++ P R AP AP PR R PRPP R ++ G G Sbjct: 437 QPQRYATPQPQQPQRYAPPPAPEPQQPR---REPRPPRQRSANPMRIPGLG 484
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 28.9 bits (63), Expect = 5.5 Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Frame = -2 Query: 392 PPRSAPTAAP-PGLAPRVLQRPPRP------PTHRGMALAQMAGCGSRASAPSIFGAS*F 234 P R P P P PR P +P P RG A G SAP GA Sbjct: 200 PARGDPVGEPGPAARPRTPAPPAQPAAVAAAPARRGPASPASPAAGP-VSAPGGGGAPSG 258 Query: 233 GR*VVTHSLADFDFHDHRPAVLIDQHPLWVLG*RAVGHRNPASGSSRIASSA 78 G H H HR +L + L R +G R+P S + +SS+ Sbjct: 259 GGDRGRHH------HQHREPLLDEPAAARRLDPRPLGARSPVSSNPNSSSSS 304
>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) (38 kDa mitochondrial outer membrane protein) (OM38) Length = 361 Score = 28.9 bits (63), Expect = 5.5 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -2 Query: 398 LLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG 282 +L S P PP P ++ PP PP+ G L + G Sbjct: 4 VLAASSPPAGPPPPPTPSLVGLPPPPPSPPGFTLPPLGG 42
>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88| kDa nuclear pore complex protein) (Nucleoporin Nup84) Length = 742 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 186 VMEVEIR*GVCNNSPAESTSPENGWR*SARPTPGHLGERH 305 V+ + +R G+ N SPAE+ P S P P HL R+ Sbjct: 22 VVFLRLREGLKNQSPAEADKPATSTSPSCPPLPPHLPTRN 61
>LITAF_XENTR (Q6P828) Lipopolysaccharide-induced tumor necrosis factor-alpha| factor homolog (LPS-induced TNF-alpha factor homolog) Length = 148 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = -2 Query: 413 SFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMA 285 S Y +P +APP PP PP H+GM M+ Sbjct: 4 SGNYQPVPIGFTVPSAPPSYEEATFHHPPYPPLHQGMDAKNMS 46
>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1748 Score = 28.9 bits (63), Expect = 5.5 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -2 Query: 422 SKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPT 315 S F L PP S AA P P Q+PPRPPT Sbjct: 558 SSFLPSSCLQPPASPSIAAAPHPLPPA-QKPPRPPT 592
>TCF19_MACMU (Q5TM48) Transcription factor 19| Length = 345 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Frame = -2 Query: 431 LRPSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPP----RPPTHRGMA 300 LRP +F PRS P APPG PP R HR +A Sbjct: 185 LRPQPLTFSPSWGGPRSLPVPAPPGEVGNAPSAPPPRNRRKSVHRVLA 232
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 28.9 bits (63), Expect = 5.5 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGM 303 PP P+A P P RPP PP+ GM Sbjct: 351 PPPRYPSAGPGMYPPPPPSRPPAPPSGHGM 380
>YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis associated with| cancer putative autoantigen 1) (DACA-1) Length = 559 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 7/45 (15%) Frame = -2 Query: 371 AAPPGLAPRVLQRPPRP-------PTHRGMALAQMAGCGSRASAP 258 A PP LA Q P +P P +R A Q G GS +++P Sbjct: 307 AQPPALAQPQYQSPQQPPQTRWVAPRNRNAAFGQSGGAGSDSNSP 351
>EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril interface-located| protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10) Length = 1053 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPR-VLQRPPRPPTHRGMALAQMAG 282 P AP+ PP AP+ LQ P PP G A A+ G Sbjct: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPG 821
>ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) Length = 1262 Score = 28.5 bits (62), Expect = 7.2 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +1 Query: 319 GGRGGRCKTRGASPGGAAVGADLGGS 396 GGRG R + RGA+ GG+ GGS Sbjct: 112 GGRGSRRQRRGAAGGGSTRAPPAGGS 137
>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4| (WASP-family protein member 4) Length = 625 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRPP 318 PP +P ++ PG AP PP PP Sbjct: 432 PPLGSPPSSKPGFAPPPAPPPPPPP 456
>ICP34_HHV11 (P36313) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 248 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/24 (58%), Positives = 14/24 (58%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRP 321 PP SAP A P APR RPP P Sbjct: 87 PPESAPEARPTAAAPR--PRPPPP 108
>ABL1_HUMAN (P00519) Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2)| (p150) (c-ABL) (Abelson murine leukemia viral oncogene homolog 1) Length = 1130 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 383 SAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPS 255 S+P ++PP L P+ L+R G+ + AG GS P+ Sbjct: 804 SSPGSSPPNLTPKPLRRQVTVAPASGLPHKEEAGKGSALGTPA 846
>SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (Protein enhancer| of yellow 3) Length = 2006 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = +1 Query: 94 RDEPEAGLRCPTAR*PRTHKGCWSI--KTAGR---WSWKSKSAKECV 219 RD PEA +RC T R R H C + + GR ++W+ K C+ Sbjct: 1707 RDMPEAFIRCYTCR-KRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCI 1752
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 28.5 bits (62), Expect = 7.2 Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 10/56 (17%) Frame = -2 Query: 392 PPRSAPTAAPPGL--APRVLQRPP----RPPTHRGM----ALAQMAGCGSRASAPS 255 P +AP AAPP AP L RPP PPT A AQ G A AP+ Sbjct: 261 PAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPA 316
>BUB1_SCHPO (O94751) Checkpoint serine/threonine-protein kinase bub1 (EC| 2.7.11.1) Length = 1044 Score = 28.5 bits (62), Expect = 7.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 Query: 374 TAAPPGLAPRVLQRPPRPPTHRGMALAQM 288 T P L+P+ Q+PP P H ALA + Sbjct: 365 TVMPVALSPKPAQKPPSPTIHTKAALADI 393
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = -2 Query: 389 PRSAPTAAPPGLAPRVLQRP--PRPPTHRGMALAQMAGCGSRASAPSIFG 246 PR A A P +P RP PRPP + A + A A+AP+ G Sbjct: 60 PRKAAPAKPGAPSPAQAARPAAPRPPAPKPAAAERPAAAERPAAAPAAPG 109
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 10/49 (20%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPR----PPT------HRGMALAQMAGCG 276 PP P A PPG P Q PPR PP RG ++ + CG Sbjct: 35 PPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCG 83
>RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytokine IK)| Length = 557 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 410 FEYLLLPPRSAPTAAPP 360 F LL+ PR+APT+APP Sbjct: 36 FRKLLMTPRAAPTSAPP 52
>RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytokine IK)| Length = 557 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 410 FEYLLLPPRSAPTAAPP 360 F LL+ PR+APT+APP Sbjct: 36 FRKLLMTPRAAPTSAPP 52
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +1 Query: 235 NQLAPKMDGAEARDPHPAIWASAMPR*VGGRGGRCKTRGASPGGAAVGADLGG 393 +Q P + GA H +GGRG R RG GG A GA GG Sbjct: 535 SQTLPALAGAPTAHAHAVPGPGPAAATLGGRGRRGSWRGGRRGGGA-GASGGG 586
>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)| (CDC2-related protein kinase 5) Length = 1511 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = -2 Query: 395 LPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIFGAS 240 L P+ P P L P++LQ PP PP L +A G+ A+A ++ AS Sbjct: 32 LSPQQPPLLLPL-LQPQLLQPPPPPP-----PLLFLAAPGAAAAAAAVAAAS 77
>CYSH_NEIMA (Q9JUD5) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)| (PAPS reductase, thioredoxin dependent) (PAdoPS reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) Length = 244 Score = 28.1 bits (61), Expect = 9.4 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +1 Query: 175 AGRWSWKSKSAKEC 216 AGRW W+ K++KEC Sbjct: 227 AGRWWWEDKNSKEC 240
>CCNL1_CHICK (Q5ZJP9) Cyclin-L1| Length = 534 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +3 Query: 15 GSAASVSRATESGAPSGPFLVSRTGDAG*TGSRVTVP 125 GSAA+V+ A G P+GP T A TGS VP Sbjct: 6 GSAAAVA-AVAGGGPAGPHAAGVTAGAVTTGSGAPVP 41
>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor| Length = 2213 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRP---PTHRGMALAQMAGCGSRASA 261 P S P A P LAPR P RP P G A CG R +A Sbjct: 28 PRGSPPGRARPSLAPRPGPEPSRPRAAPETPGGDTAGAGRCGGRRAA 74
>PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein| (ALG-2-interacting protein X) (ALG-2-interacting protein 1) (E2F1-inducible protein) (Eig2) Length = 869 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 13/57 (22%) Frame = -2 Query: 389 PRSAPTAAPPGLAPRVL--------QRPPRP--PTHR---GMALAQMAGCGSRASAP 258 P + AAPP APR + RPP P P +R A A AG G+ ++AP Sbjct: 731 PAAGHAAAPPTPAPRTMPPAKPQPPARPPPPVLPANRVPPASAAAAPAGVGTASAAP 787
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMA 285 PP S T++PP P P+PPT+ LA A Sbjct: 2358 PPPSPSTSSPPPTPPLPPATSPKPPTYPKKKLAVAA 2393
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -2 Query: 392 PPRSAPTAAPPGLAPRVLQRPPR-PPTHRGMALAQMAGCGSRASAPS 255 PP+++P APP A P R PP+ + A S S+P+ Sbjct: 47 PPQASPARAPPPQASPARASPARAPPSRSSSGRSSSARSASTTSSPT 93
>OPA1_MOUSE (P58281) Dynamin-like 120 kDa protein, mitochondrial precursor| (Large GTP-binding protein) (LargeG) Length = 960 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = +1 Query: 181 RWS-WKSKSAKECVTTHLPNQLAPKMDGAEARDPHPAIWAS 300 RW WK+++ ++CV N+L + + D HPA AS Sbjct: 774 RWMYWKNRTQEQCVHNETKNELEKML---KVNDEHPAYLAS 811
>FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 570 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = -2 Query: 395 LPPRSAPTAAPPGLAPRVLQRPPRPPTHR 309 LPP P PP L P V Q PP P HR Sbjct: 338 LPPNIPP---PPFLPPPVSQAPPLIPPHR 363
>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1470 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = +1 Query: 319 GGRGGRCKTRGASPGGAAVGADLGGSS 399 GG GGR K GA GG GA GG + Sbjct: 431 GGGGGRGKGGGAGGGGGGGGASGGGGA 457
>SYQ_CHRVO (Q7NX86) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 560 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 7/30 (23%) Frame = -2 Query: 221 VTHSLADFDFHDHRPA-------VLIDQHP 153 +THSL +F DHRP + I+ HP Sbjct: 227 ITHSLCSLEFEDHRPLYDWVLDNISIEHHP 256
>BCL6B_HUMAN (Q8N143) B-cell CLL/lymphoma 6 member B protein (Bcl6-associated| zinc finger protein) (Zinc finger protein 62) Length = 480 Score = 28.1 bits (61), Expect = 9.4 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -2 Query: 425 PSKFSFEYLLLPPRSAPTAAPPGLAPRVLQRPPRPPT 315 P S L P + PTA PPG +PR + P PPT Sbjct: 137 PLGISLRPLEAEPPTPPTAPPPG-SPRRSEGHPDPPT 172
>RCOR2_RAT (Q5FWT8) REST corepressor 2| Length = 523 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 3/27 (11%) Frame = -2 Query: 389 PRSAPTAAPPGLAPRVLQRPP---RPP 318 PRS P A PP P L +PP RPP Sbjct: 430 PRSVPPAPPPPPPPTSLSQPPPLLRPP 456
>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)| Length = 523 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 3/27 (11%) Frame = -2 Query: 389 PRSAPTAAPPGLAPRVLQRPP---RPP 318 PRS P A PP P L +PP RPP Sbjct: 430 PRSVPPAPPPPPPPTSLSQPPPLLRPP 456
>RCOR2_HUMAN (Q8IZ40) REST corepressor 2| Length = 523 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 3/27 (11%) Frame = -2 Query: 389 PRSAPTAAPPGLAPRVLQRPP---RPP 318 PRS P A PP P L +PP RPP Sbjct: 430 PRSVPPAPPPPPPPTSLSQPPPLLRPP 456
>CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-containing| protein 2 Length = 153 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = -2 Query: 389 PRSAPTAAPP-GLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIFG 246 PR AP A PP AP + P P G+ +AQMA + + S G Sbjct: 26 PRRAPAAQPPAAAAPSAVGSPAAAPRQPGL-MAQMATTAAGVAVGSAVG 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,547,917 Number of Sequences: 219361 Number of extensions: 1595541 Number of successful extensions: 7386 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 5918 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7280 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
