>SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Transcriptional|
          corepressor Sin3b) (Histone deacetylase complex subunit
          Sin3b)
          Length = 1162

 Score = 32.0 bits (71), Expect = 0.49
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 90 TGEGGWIGRGASGSNWDRGG*EAHER 13
          +G GG  GRG SG+ W R G   HE+
Sbjct: 11 SGAGGPAGRGLSGARWGRSGSAGHEK 36

>SIN3B_MOUSE (Q62141) Paired amphipathic helix protein Sin3b (Transcriptional|
          corepressor Sin3b) (Histone deacetylase complex subunit
          Sin3b)
          Length = 1098

 Score = 31.2 bits (69), Expect = 0.83
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 87 GEGGWIGRGASGSNWDRGG*EAHER 13
          G GG  GRG  GS W R G   HE+
Sbjct: 5  GSGGSAGRGFGGSRWGRSGSGGHEK 29

>MCHR1_MACMU (Q8MJ89) Melanin-concentrating hormone receptor 1 (MCH receptor 1)|
           (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein
           coupled receptor 24) (Fragment)
          Length = 388

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
 Frame = -1

Query: 126 PRESGRR----RPDWATGEGGWIGRGASGSNW 43
           P + GRR    +P W  G   W+   A+G+ W
Sbjct: 4   PGQGGRRWRLPQPAWVEGSSAWLWEPATGTGW 35

>APS1_SCHPO (Q09790) Diphosphoinositol polyphosphate phosphohydrolase aps1 (EC|
           3.6.1.52) (Diadenosine 5',5'''-P1,P6-hexaphosphate
           hydrolase) (EC 3.6.1.-) (Ap6A hydrolase)
          Length = 210

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
 Frame = -1

Query: 117 SGRRRPDWATGEGGW-----IGRGASGSNWDRGG*EAHERR 10
           S ++ P W   +GGW     + + A    W+ GG   H  R
Sbjct: 62  SAKKHPSWVVPKGGWEADESVQQAALREGWEEGGLVGHITR 102

>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 552

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 87  GEGGWIGRGASGSNWDRGG 31
           G GGW GRG  G    RGG
Sbjct: 502 GRGGWGGRGGRGGRGGRGG 520

>SMG1_DROME (Q70PP2) Serine/threonine-protein kinase Smg1 (EC 2.7.11.1)|
          Length = 3218

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 93  ATGEGGWIGRGASGSNWDRGG*EAHE 16
           ATG G   G G S S W  GG ++H+
Sbjct: 56  ATGSGNIAGLGGSESMWSPGGGKSHD 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,178,253
Number of Sequences: 219361
Number of extensions: 134349
Number of successful extensions: 622
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 80,573,946
effective HSP length: 19
effective length of database: 76,406,087
effective search space used: 1833746088
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)