>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.025
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 36       cgcgatcccaattcgatccgctc 58
                |||||||||||||||||||||||
Sbjct: 22771240 cgcgatcccaattcgatccgctc 22771262



 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 4        ttttttcctcctctcgtgcgcctc 27
                |||| |||||||||||||||||||
Sbjct: 22771192 ttttctcctcctctcgtgcgcctc 22771215

>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score = 46.1 bits (23), Expect = 0.025
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 36    cgcgatcccaattcgatccgctc 58
             |||||||||||||||||||||||
Sbjct: 88629 cgcgatcccaattcgatccgctc 88651



 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     ttttttcctcctctcgtgcgcctc 27
             |||| |||||||||||||||||||
Sbjct: 88581 ttttctcctcctctcgtgcgcctc 88604

>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1
             Contains the MATN1 gene for matrilin 1 cartilage matrix
             protein, a novel gene (FLJ46197, FLJ33163), the 3' end of
             the gene for Lysosomal-associated multispanning membrane
             protein-5 (LAPTM5) and a CpG island, complete sequence
          Length = 152042

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    cccctctcccgatccacccc 79
             ||||||||||||||||||||
Sbjct: 29584 cccctctcccgatccacccc 29565

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      atccggccgccgccgcccgg 116
               ||||||||||||||||||||
Sbjct: 2015886 atccggccgccgccgcccgg 2015867



 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 100     cggccgccgccgcccggatt 119
               ||||||||||||||||||||
Sbjct: 1120760 cggccgccgccgcccggatt 1120741

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 100      cggccgccgccgcccggattcgcg 123
                |||||| |||||||||||||||||
Sbjct: 28975145 cggccggcgccgcccggattcgcg 28975168

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      atccggccgccgccgcccgg 116
               ||||||||||||||||||||
Sbjct: 2711404 atccggccgccgccgcccgg 2711423

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 94      ccaatccggccgccgccgcc 113
               ||||||||||||||||||||
Sbjct: 2495246 ccaatccggccgccgccgcc 2495265

>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0724B10
          Length = 169143

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   cggccgccgccgcccggattcgcg 123
             |||||| |||||||||||||||||
Sbjct: 21310 cggccggcgccgcccggattcgcg 21333

>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   cggccgccgccgcccggattcgcg 123
             |||||| |||||||||||||||||
Sbjct: 58203 cggccggcgccgcccggattcgcg 58226

>gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, complete sequence
          Length = 205642

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    cccccttccccggtcgccca 96
             ||||||||||||||||||||
Sbjct: 85744 cccccttccccggtcgccca 85725

>ref|XM_475251.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 573

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  caatccggccgccgccgcc 113
           |||||||||||||||||||
Sbjct: 378 caatccggccgccgccgcc 396

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 107    cgccgcccggattcgcgcg 125
              |||||||||||||||||||
Sbjct: 972809 cgccgcccggattcgcgcg 972791

>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19,
              complete sequence
          Length = 176917

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 95     caatccggccgccgccgcc 113
              |||||||||||||||||||
Sbjct: 105691 caatccggccgccgccgcc 105709

>gb|AF182374.6| Bradyrhizobium sp. ORS278 photosynthetic gene cluser, complete
             sequence; and bacteriophytochrome (bphP), PpsR protein
             (ppsR), cytochrome C2 (cycA), geranylgeranyl
             bacteriochlorophyll reductase (bchP), light harvesting
             pigment major facilitator family (bch2),
             geranylgeranyl-bacteriochlorophyll synthetase (bchG),
             PpsR1 (ppsR1), and transcriptional regulator, AerR (aerR)
             genes, complete cds; and 2-vinyl bacteriochlorophillide
             hydratase BchF subunit (bchF) gene, partial cds
          Length = 30040

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    ccaatccggccgccgccgc 112
             |||||||||||||||||||
Sbjct: 28045 ccaatccggccgccgccgc 28027

>gb|AE009352.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 122 of
            187 of the complete sequence
          Length = 10693

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 102  gccgccgccgcccggattcgcgc 124
            ||||||||||||||| |||||||
Sbjct: 4025 gccgccgccgcccggcttcgcgc 4003

>gb|AE008261.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 65 of
            187 of the complete sequence
          Length = 10189

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 102  gccgccgccgcccggattcgcgc 124
            ||||||||||||||| |||||||
Sbjct: 7947 gccgccgccgcccggcttcgcgc 7969

>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09,
             complete sequence
          Length = 177374

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 95    caatccggccgccgccgcc 113
             |||||||||||||||||||
Sbjct: 48272 caatccggccgccgccgcc 48290

>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 73    ccaccccccttccccggtcgccc 95
             |||||||||| ||||||||||||
Sbjct: 48715 ccacccccctcccccggtcgccc 48693

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                          
Query: 99      ccggccgccgccgcccggattcgcgcg 125
               |||||||| ||||| ||||||||||||
Sbjct: 2064248 ccggccgcagccgcgcggattcgcgcg 2064274

>emb|AJ421798.1|SCA421798 Streptomyces cattleya thienamycin gene cluster
          Length = 32329

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    tccggccgccgccgcccgg 116
             |||||||||||||||||||
Sbjct: 23875 tccggccgccgccgcccgg 23893

>gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosome ul, complete sequence
          Length = 236367

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 76     ccccccttccccggtcgcc 94
              |||||||||||||||||||
Sbjct: 140740 ccccccttccccggtcgcc 140758

>gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromosome ul, complete
             sequence
          Length = 208903

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    ccccccttccccggtcgcc 94
             |||||||||||||||||||
Sbjct: 17036 ccccccttccccggtcgcc 17054

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 97      atccggccgccgccgcccg 115
               |||||||||||||||||||
Sbjct: 3107093 atccggccgccgccgcccg 3107075

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 76       ccccccttccccggtcgcc 94
                |||||||||||||||||||
Sbjct: 16631573 ccccccttccccggtcgcc 16631555

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 95       caatccggccgccgccgcc 113
                |||||||||||||||||||
Sbjct: 20792467 caatccggccgccgccgcc 20792485

>gb|AC091114.11| Homo sapiens chromosome 8, clone RP11-136O12, complete sequence
          Length = 182291

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     tccgctcgcccctctcccg 70
              |||||||||||||||||||
Sbjct: 164896 tccgctcgcccctctcccg 164878

>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1014_E02
          Length = 159669

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 76     ccccccttccccggtcgcc 94
              |||||||||||||||||||
Sbjct: 103397 ccccccttccccggtcgcc 103379

>dbj|AP005464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:B1027A11
          Length = 169506

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 76   ccccccttccccggtcgcc 94
            |||||||||||||||||||
Sbjct: 7483 ccccccttccccggtcgcc 7465

>dbj|AK073384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030B15, full
           insert sequence
          Length = 829

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  caatccggccgccgccgcc 113
           |||||||||||||||||||
Sbjct: 478 caatccggccgccgccgcc 496

>emb|CR381605.5| Zebrafish DNA sequence from clone CH211-156J19 in linkage group 21,
             complete sequence
          Length = 180526

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     ctgttttttcctcctctcg 19
             |||||||||||||||||||
Sbjct: 33900 ctgttttttcctcctctcg 33882

>emb|AJ628642.1| Streptomyces hygroscopicus subsp. hygroscopicus genomic region of the
             gene cluster for hygromycin B biosynthetis, strain DSM
             40578
          Length = 34921

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    ccggccgccgccgcccgga 117
             |||||||||||||||||||
Sbjct: 20045 ccggccgccgccgcccgga 20063

>gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q24.2, complete
             sequence
          Length = 199668

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 52    tccgctcgcccctctcccg 70
             |||||||||||||||||||
Sbjct: 38610 tccgctcgcccctctcccg 38592

>gb|AC104319.3| Homo sapiens chromosome 8 clone RP11-407G9 map 8q24.2, complete sequence
          Length = 216749

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     tccgctcgcccctctcccg 70
              |||||||||||||||||||
Sbjct: 195007 tccgctcgcccctctcccg 194989


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,331,110
Number of Sequences: 3902068
Number of extensions: 1331110
Number of successful extensions: 116831
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114787
Number of HSP's gapped (non-prelim): 2044
length of query: 132
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 111
effective length of database: 17,151,101,840
effective search space: 1903772304240
effective search space used: 1903772304240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)