ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl32d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MNN1_YEAST (P39106) Alpha-1,3-mannosyltransferase MNN1 (EC 2.4.1.-) 30 3.1
2SYL2_SULSO (O33768) Leucyl-tRNA synthetase 2 (EC 6.1.1.4) (Leuci... 29 4.0

>MNN1_YEAST (P39106) Alpha-1,3-mannosyltransferase MNN1 (EC 2.4.1.-)|
          Length = 762

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -3

Query: 418 DESSF*KTTCMLMNSLNSIFPDVDPERTEGATVFVFPELRSPFSQKRTTE 269
           D+ S  +    L+ +LN+ FP+ DP+  +    F F     PF    TTE
Sbjct: 209 DKMSKERVQSKLIKTLNATFPNYDPDNFKKYDQFEFEHKMFPFINNFTTE 258



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>SYL2_SULSO (O33768) Leucyl-tRNA synthetase 2 (EC 6.1.1.4) (Leucine--tRNA|
           ligase 2) (LeuRS 2)
          Length = 944

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = +3

Query: 81  LFPSIVFGSLHCVWIHPDRFSVSAMVLGLRTKTKKDAAIHVDFNIFIQEISPWPPSESLK 260
           L P  +FG+   +WI+P    V A +LG +    + AA  + F I   EI      E +K
Sbjct: 217 LRPETIFGAT-ALWINPSEMYVVASMLGKKMILSEKAAAKLSFQIDDIEI-----EEKIK 270

Query: 261 SLRSVVLFWEN 293
             + V L  EN
Sbjct: 271 GSKLVGLKVEN 281


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,240,023
Number of Sequences: 219361
Number of extensions: 1233980
Number of successful extensions: 2745
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2745
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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