ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl32c09 |
|---|---|
| Clone Library Name | barley_pub |
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 39.7 bits (91), Expect = 0.004 Identities = 22/59 (37%), Positives = 34/59 (57%) Frame = +3 Query: 294 MRKWSNVPASWRKKSNDPCGDKWDGIQCNGANSRVTSLNLFGMNMKGTLNDDIGSLTEL 470 ++K N P+S+ DPC KW I C G RVT + + ++GTL+ D+ +L+EL Sbjct: 35 LKKSLNPPSSFGWSDPDPC--KWTHIVCTGTK-RVTRIQIGHSGLQGTLSPDLRNLSEL 90 Score = 36.6 bits (83), Expect = 0.033 Identities = 19/50 (38%), Positives = 30/50 (60%) Frame = +3 Query: 321 SWRKKSNDPCGDKWDGIQCNGANSRVTSLNLFGMNMKGTLNDDIGSLTEL 470 SW K NDPC + W GI C +N +T ++L M + GT++ + G++ L Sbjct: 344 SW--KGNDPCTN-WIGIAC--SNGNITVISLEKMELTGTISPEFGAIKSL 388
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 38.5 bits (88), Expect = 0.009 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%) Frame = +3 Query: 321 SWRKKSNDPCG-DKWDGIQCNGAN--SRVTSLNLFGMNMKGTLNDDIGSLTEL 470 SW S DPC W G+ C+G+N S +T L+L N+KGT+ + +T+L Sbjct: 382 SW---SGDPCMLFPWKGVACDGSNGSSVITKLDLSSSNLKGTIPSSVTEMTKL 431
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 34.7 bits (78), Expect = 0.13 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 315 PASWRKKSNDPCGDKWDGIQCNGANS-RVTSLNLFGMNMKGTLNDDIGSLTEL 470 P W S+ W GI CN N+ RV L L + G L++ +G L E+ Sbjct: 50 PDGWINSSSSTDCCNWTGITCNSNNTGRVIRLELGNKKLSGKLSESLGKLDEI 102
>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2365 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/56 (37%), Positives = 24/56 (42%) Frame = -3 Query: 190 GRPSPLAAISTLLCPRLERQKTDLFLIPAVCFDSPAFSAASWHLGRPAAPGGGDEG 23 G+P T PR E K P + PA S+ SWH G P A G G EG Sbjct: 1489 GQPEAWEEKPTHELPR-ELGKRSPLTSPPENWGGPAESSQSWHSGTPTAVGWGAEG 1543
>CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| Length = 3301 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Frame = +3 Query: 306 SNVPASWRKKSNDPCGDKWDGIQCN------GANSRVTSLNLFGMNMKGTLNDDIGS 458 S+ AS K+N C ++W G C+ G + R+T + + GTL+ D G+ Sbjct: 1712 SHFCASGPCKNNGFCSERWGGFSCDCPVGFGGKDCRLTMAHPYHFQGNGTLSWDFGN 1768
>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)| Length = 980 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = +3 Query: 324 WRKKSNDPCGDKWDGIQCNGANSRVTSLNLFGMNMKGTLNDDIGSLTEL 470 W S+ + G+ C+ ++RV SLN+ + GT++ +IG LT L Sbjct: 49 WIHSSSPDAHCSFSGVSCDD-DARVISLNVSFTPLFGTISPEIGMLTHL 96
>IRK10_RAT (P49655) ATP-sensitive inward rectifier potassium channel 10| (Potassium channel, inwardly rectifying subfamily J member 10) (ATP-sensitive inward rectifier potassium channel KAB-2) (Kir4.1) (BIR10) (Brain-specific inwardly rectifying K(+) chann Length = 379 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 433 PFMFMPNRFSDVTLELAPLHWIPSHLSPQGSFDFFLQLAGTFD 305 PF+ +P F V E +PL +P S +G F+ L L+GT + Sbjct: 247 PFLILPLTFYHVVDETSPLKDLPLR-SGEGDFELVLILSGTVE 288
>IRK10_MOUSE (Q9JM63) ATP-sensitive inward rectifier potassium channel 10| (Potassium channel, inwardly rectifying subfamily J member 10) (Inward rectifier K(+) channel Kir4.1) Length = 379 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 433 PFMFMPNRFSDVTLELAPLHWIPSHLSPQGSFDFFLQLAGTFD 305 PF+ +P F V E +PL +P S +G F+ L L+GT + Sbjct: 247 PFLILPLTFYHVVDETSPLKDLPLR-SGEGDFELVLILSGTVE 288
>IRK10_HUMAN (P78508) ATP-sensitive inward rectifier potassium channel 10| (Potassium channel, inwardly rectifying subfamily J member 10) (Inward rectifier K(+) channel Kir1.2) (ATP-dependent inwardly rectifying potassium channel Kir4.1) Length = 379 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 433 PFMFMPNRFSDVTLELAPLHWIPSHLSPQGSFDFFLQLAGTFD 305 PF+ +P F V E +PL +P S +G F+ L L+GT + Sbjct: 247 PFLILPLTFYHVVDETSPLKDLPLR-SGEGDFELVLILSGTVE 288
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 28.5 bits (62), Expect = 9.1 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 23/86 (26%) Frame = +3 Query: 282 LKSLMRKWSNVPASWRKKSNDPCGDKWDGIQCNGANS----------------------- 392 LK+ + + V SW PC W + CN NS Sbjct: 35 LKNSLADPNKVLQSWDATLVTPC--TWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLP 92 Query: 393 RVTSLNLFGMNMKGTLNDDIGSLTEL 470 + L L+ N+ GT+ + +G+LTEL Sbjct: 93 NLQYLELYSNNITGTIPEQLGNLTEL 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,236,110 Number of Sequences: 219361 Number of extensions: 1129900 Number of successful extensions: 3776 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3573 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3775 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
