ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl32c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070624.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
2gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
3gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
5ref|XM_591302.2| PREDICTED: Bos taurus similar to Est1p-like pro... 44 0.41
6ref|XM_547535.2| PREDICTED: Canis familiaris similar to Est1p-li... 44 0.41
7ref|XM_550656.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
8gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
9gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, com... 42 1.6
10gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genom... 42 1.6
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
12ref|XM_752572.1| Ustilago maydis 521 hypothetical protein (UM015... 42 1.6
13emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
14gb|AE005789.1| Caulobacter crescentus CB15 section 115 of 359 of... 42 1.6
15gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.6
16gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.6
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23emb|BX000520.12| Mouse DNA sequence from clone RP23-261N8 on chr... 42 1.6
24dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
26dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27dbj|AK110875.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
28dbj|AK099578.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
29dbj|AK073993.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
31gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.4
32gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 6.4
33gb|AC168852.2| Mus musculus BAC clone RP24-191L21 from chromosom... 40 6.4
34ref|XM_483363.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
35ref|XM_483030.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
36ref|XM_482385.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
37gb|AC147804.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
38gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
39ref|XM_362346.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.4
40ref|XM_955243.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
41ref|XM_327356.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
42gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 6.4
43gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, co... 40 6.4
44emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 i... 40 6.4
45ref|XM_850093.1| PREDICTED: Canis familiaris hypothetical protei... 40 6.4
46ref|XM_648767.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.4
47ref|XM_652103.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.4
48emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chr... 40 6.4
49emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chr... 40 6.4
50emb|Z34269.1|HVBKACPS4 H.vulgare (pMaW25) mRNA for beta-ketoacyl... 40 6.4
51emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome;... 40 6.4
52emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
53emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
54gb|AF461331.1| Drosophila bicornuta hunchback (hb) gene, partial... 40 6.4
55gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, com... 40 6.4
56gb|AC137146.9| Mus musculus chromosome 1, clone RP24-358I14, com... 40 6.4
57dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
58dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
59dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
60dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
61gb|AC009094.7|AC009094 Homo sapiens chromosome 16 clone RP11-430... 40 6.4
62gb|AC073465.5| Homo sapiens BAC clone RP11-158L8 from 2, complet... 40 6.4
63gb|AC091756.3| Sus scrofa clone RP44-13J14, complete sequence 40 6.4
64gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosom... 40 6.4
65dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
66dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
67dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
68dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
69dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
70dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
71gb|AE005124.1| Halobacterium sp. NRC-1 section 155 of 170 of the... 40 6.4
72dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
73dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
74dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
75emb|AJ511345.1|HVU511345 Hordeum vulgare subsp. vulgare mRNA for... 40 6.4
76dbj|AK108015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
77dbj|AK063283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
78emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.4
79emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1... 40 6.4
80emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4,... 40 6.4
81emb|AL731631.2|OSJN00279 Oryza sativa genomic DNA, chromosome 4,... 40 6.4 
>dbj|AK070624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J22, full
           insert sequence
          Length = 3313

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 387 aactcaagggttacatcgctaaatctatttggcatgaacatgaagggcactctcaatgat 446
           ||||||||||||||||| |||||| |||| || |||||| || | || ||||| | ||||
Sbjct: 391 aactcaagggttacatcactaaatttattcggtatgaacttggaagggactctaagtgat 450

                               
Query: 447 gatataggaagcctgactga 466
           ||||| |||| |||||||||
Sbjct: 451 gatatcggaaacctgactga 470



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 309 aatgtgcctgctagctggaggaag 332
           ||||||||||||||||||||||||
Sbjct: 322 aatgtgcctgctagctggaggaag 345
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>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
              complete sequence
          Length = 138677

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 309    aatgtgcctgctagctggaggaag 332
              ||||||||||||||||||||||||
Sbjct: 130781 aatgtgcctgctagctggaggaag 130804
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>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01,
             complete sequence
          Length = 143263

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 309   aatgtgcctgctagctggaggaag 332
             ||||||||||||||||||||||||
Sbjct: 72699 aatgtgcctgctagctggaggaag 72722
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 309      aatgtgcctgctagctggaggaag 332
                ||||||||||||||||||||||||
Sbjct: 13701640 aatgtgcctgctagctggaggaag 13701663
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>ref|XM_591302.2| PREDICTED: Bos taurus similar to Est1p-like protein B, transcript
            variant 1 (LOC513598), mRNA
          Length = 3035

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 245  cgccgccgccgccacccaccca 266
            ||||||||||||||||||||||
Sbjct: 1581 cgccgccgccgccacccaccca 1602
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>ref|XM_547535.2| PREDICTED: Canis familiaris similar to Est1p-like protein B
            (LOC490414), mRNA
          Length = 3433

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 245  cgccgccgccgccacccaccca 266
            ||||||||||||||||||||||
Sbjct: 1615 cgccgccgccgccacccaccca 1636
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>ref|XM_550656.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1488

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 tccaggatcgccgccgccgcc 257
           |||||||||||||||||||||
Sbjct: 276 tccaggatcgccgccgccgcc 296
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>gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0064M09 map near S6115, complete sequence
          Length = 215240

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 244   tcgccgccgccgccacccacccaca 268
             |||||| ||||||||||||||||||
Sbjct: 39972 tcgccgacgccgccacccacccaca 39996
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>gb|AC116705.11| Mus musculus chromosome 5, clone RP23-26P10, complete sequence
          Length = 213155

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 1      agttgctttgctcc-tccttccttccttc 28
              |||||||||||||| ||||||||||||||
Sbjct: 147708 agttgctttgctccttccttccttccttc 147680
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>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete
              sequence
          Length = 154558

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    cgccgccgccgccacccaccc 265
              |||||||||||||||||||||
Sbjct: 110559 cgccgccgccgccacccaccc 110539
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 245      cgccgccgccgccacccaccc 265
                |||||||||||||||||||||
Sbjct: 23274078 cgccgccgccgccacccaccc 23274058



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 246      gccgccgccgccacccaccc 265
                ||||||||||||||||||||
Sbjct: 24017728 gccgccgccgccacccaccc 24017747
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>ref|XM_752572.1| Ustilago maydis 521 hypothetical protein (UM01518.1) partial mRNA
          Length = 5172

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 242  gatcgccgccgccgccacccaccca 266
            ||||| |||||||||||||||||||
Sbjct: 3292 gatcggcgccgccgccacccaccca 3268
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>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 237   tccaggatcgccgccgccgcc 257
             |||||||||||||||||||||
Sbjct: 47347 tccaggatcgccgccgccgcc 47367
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>gb|AE005789.1| Caulobacter crescentus CB15 section 115 of 359 of the complete genome
          Length = 11428

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  tccaggatcgccgccgccgcc 257
            |||||||||||||||||||||
Sbjct: 6289 tccaggatcgccgccgccgcc 6309
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    tccaggatcgccgccgccgcc 257
              |||||||||||||||||||||
Sbjct: 307904 tccaggatcgccgccgccgcc 307884
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 242     gatcgccgccgccgccaccca 262
               |||||||||||||||||||||
Sbjct: 1374441 gatcgccgccgccgccaccca 1374461
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 244      tcgccgccgccgccacccacccaca 268
                |||||| ||||||||||||||||||
Sbjct: 12657296 tcgccgacgccgccacccacccaca 12657320
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 245      cgccgccgccgccacccaccc 265
                |||||||||||||||||||||
Sbjct: 19878397 cgccgccgccgccacccaccc 19878377
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 245      cgccgccgccgccacccaccc 265
                |||||||||||||||||||||
Sbjct: 22675027 cgccgccgccgccacccaccc 22675047



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 237     tccaggatcgccgccgccgcc 257
               |||||||||||||||||||||
Sbjct: 2725257 tccaggatcgccgccgccgcc 2725237



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 245      cgccgccgccgccacccacc 264
                ||||||||||||||||||||
Sbjct: 27892201 cgccgccgccgccacccacc 27892182
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 245      cgccgccgccgccacccaccc 265
                |||||||||||||||||||||
Sbjct: 23267106 cgccgccgccgccacccaccc 23267086



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 246      gccgccgccgccacccaccc 265
                ||||||||||||||||||||
Sbjct: 23930717 gccgccgccgccacccaccc 23930736
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>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0710H01
          Length = 187107

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    tccaggatcgccgccgccgcc 257
              |||||||||||||||||||||
Sbjct: 180598 tccaggatcgccgccgccgcc 180578
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>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0529C07
          Length = 174011

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    tccaggatcgccgccgccgcc 257
              |||||||||||||||||||||
Sbjct: 137004 tccaggatcgccgccgccgcc 136984
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>emb|BX000520.12| Mouse DNA sequence from clone RP23-261N8 on chromosome X, complete
             sequence
          Length = 112153

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   tgggatgggatccaatgcaat 380
             |||||||||||||||||||||
Sbjct: 99192 tgggatgggatccaatgcaat 99172
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>dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1047H05
          Length = 187273

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 245    cgccgccgccgccacccaccc 265
              |||||||||||||||||||||
Sbjct: 140436 cgccgccgccgccacccaccc 140456
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 245   cgccgccgccgccacccaccc 265
             |||||||||||||||||||||
Sbjct: 43047 cgccgccgccgccacccaccc 43027
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    cgccgccgccgccacccaccc 265
              |||||||||||||||||||||
Sbjct: 118556 cgccgccgccgccacccaccc 118536
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>dbj|AK110875.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-G02, full
           insert sequence
          Length = 1498

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 244 tcgccgccgccgccacccacccaca 268
           |||||| ||||||||||||||||||
Sbjct: 7   tcgccgacgccgccacccacccaca 31
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>dbj|AK099578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039B21, full
           insert sequence
          Length = 1487

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 tccaggatcgccgccgccgcc 257
           |||||||||||||||||||||
Sbjct: 275 tccaggatcgccgccgccgcc 295
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>dbj|AK073993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073H24, full
           insert sequence
          Length = 905

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 245 cgccgccgccgccacccaccc 265
           |||||||||||||||||||||
Sbjct: 616 cgccgccgccgccacccaccc 596
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 244      tcgccgccgccgccacccacccaca 268
                |||||| ||||||||||||||||||
Sbjct: 12736603 tcgccgacgccgccacccacccaca 12736627
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     ccaggatcgccgccgccgcc 257
               ||||||||||||||||||||
Sbjct: 1044443 ccaggatcgccgccgccgcc 1044424
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   tcgccgccgccgccacccac 263
             ||||||||||||||||||||
Sbjct: 42243 tcgccgccgccgccacccac 42224
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>gb|AC168852.2| Mus musculus BAC clone RP24-191L21 from chromosome 6, complete sequence
          Length = 171677

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ctttgctcctccttccttcc 25
             ||||||||||||||||||||
Sbjct: 43995 ctttgctcctccttccttcc 43976
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>ref|XM_483363.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 579

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 11 ctcctccttccttccttcgtctcc 34
          |||||||||||||||||| |||||
Sbjct: 84 ctcctccttccttccttcctctcc 61
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>ref|XM_483030.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 891

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 cgccgccgccgccacccacc 264
           ||||||||||||||||||||
Sbjct: 442 cgccgccgccgccacccacc 423
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>ref|XM_482385.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2547

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 226 tcttggcccactccaggatcgccg 249
           ||||||| ||||||||||||||||
Sbjct: 79  tcttggcgcactccaggatcgccg 56
to top
>gb|AC147804.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0070G02 map near S13580, complete sequence
          Length = 73686

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  gccgccgccgccacccaccc 265
            ||||||||||||||||||||
Sbjct: 8127 gccgccgccgccacccaccc 8108
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>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02
             map near S13580, complete sequence
          Length = 88044

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   gccgccgccgccacccaccc 265
             ||||||||||||||||||||
Sbjct: 77801 gccgccgccgccacccaccc 77782
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>ref|XM_362346.1| Magnaporthe grisea 70-15 hypothetical protein (MG04791.4) partial cds
          Length = 5328

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  cgccgccgccgccacccacc 264
            ||||||||||||||||||||
Sbjct: 4104 cgccgccgccgccacccacc 4123
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>ref|XM_955243.1| Neurospora crassa OR74A hypothetical protein (NCU07071.1) partial
           mRNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 249 gccgccgccacccacccacaggat 272
           ||||||||||||||| ||||||||
Sbjct: 178 gccgccgccacccacgcacaggat 201
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>ref|XM_327356.1| Neurospora crassa OR74A hypothetical protein (NCU07071.1) partial
           mRNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 249 gccgccgccacccacccacaggat 272
           ||||||||||||||| ||||||||
Sbjct: 178 gccgccgccacccacgcacaggat 201
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 242     gatcgccgccgccgccaccc 261
               ||||||||||||||||||||
Sbjct: 1469238 gatcgccgccgccgccaccc 1469219
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>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence
          Length = 278715

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    cttcccaggtgccaggacgc 73
             ||||||||||||||||||||
Sbjct: 58427 cttcccaggtgccaggacgc 58408
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>emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 in linkage group 8,
             complete sequence
          Length = 195545

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   atccttgatgaggaaatggt 306
             ||||||||||||||||||||
Sbjct: 82787 atccttgatgaggaaatggt 82806
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>ref|XM_850093.1| PREDICTED: Canis familiaris hypothetical protein LOC612363
           (LOC612363), mRNA
          Length = 1020

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 142 gccgggggcagaggagggtggaga 165
           ||||||||||||||||| ||||||
Sbjct: 80  gccgggggcagaggaggctggaga 103
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>ref|XM_648767.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (70.t00009)
            partial mRNA
          Length = 2058

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcaaatccttgatgaggaaatggt 306
            |||||||||| |||||||||||||
Sbjct: 1337 tcaaatccttcatgaggaaatggt 1314
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>ref|XM_652103.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (3.t00151)
            partial mRNA
          Length = 2244

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 283  tcaaatccttgatgaggaaatggt 306
            |||||||||| |||||||||||||
Sbjct: 1532 tcaaatccttcatgaggaaatggt 1509
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>emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 134028

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    gggggcagaggagggtggag 164
              ||||||||||||||||||||
Sbjct: 110701 gggggcagaggagggtggag 110720
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>emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chromosome 1p34.3-36.11,
             complete sequence
          Length = 80387

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   gggggcagaggagggtggag 164
             ||||||||||||||||||||
Sbjct: 60741 gggggcagaggagggtggag 60760
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>emb|Z34269.1|HVBKACPS4 H.vulgare (pMaW25) mRNA for beta-ketoacyl-ACP synthase
          Length = 2380

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  tcgccgccgccgccacccac 263
            ||||||||||||||||||||
Sbjct: 2076 tcgccgccgccgccacccac 2095
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>emb|BX572096.1| Prochlorococcus marinus MIT9313 complete genome; segment 2/7
          Length = 349323

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    atccaatgcaatggtgccaa 388
              ||||||||||||||||||||
Sbjct: 166785 atccaatgcaatggtgccaa 166766
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>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    gccgccgccgccacccaccc 265
              ||||||||||||||||||||
Sbjct: 135334 gccgccgccgccacccaccc 135353
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>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05,
             complete sequence
          Length = 149134

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   gccgccgccgccacccaccc 265
             ||||||||||||||||||||
Sbjct: 19885 gccgccgccgccacccaccc 19904
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>gb|AF461331.1| Drosophila bicornuta hunchback (hb) gene, partial cds
          Length = 501

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 tggctgccaagggggagggc 185
           ||||||||||||||||||||
Sbjct: 52  tggctgccaagggggagggc 33
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>gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, complete sequence
          Length = 204340

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      ttgctttgctcctccttccttcct 26
              |||||||||| |||||||||||||
Sbjct: 175585 ttgctttgcttctccttccttcct 175562
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>gb|AC137146.9| Mus musculus chromosome 1, clone RP24-358I14, complete sequence
          Length = 189466

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     cttcccaggtgccaggacgc 73
              ||||||||||||||||||||
Sbjct: 149641 cttcccaggtgccaggacgc 149622
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 246      gccgccgccgccacccaccc 265
                ||||||||||||||||||||
Sbjct: 15418756 gccgccgccgccacccaccc 15418775



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 246     gccgccgccgccacccaccc 265
               ||||||||||||||||||||
Sbjct: 6857014 gccgccgccgccacccaccc 6857033
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 244      tcgccgccgccgccacccac 263
                ||||||||||||||||||||
Sbjct: 16017826 tcgccgccgccgccacccac 16017845
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 11       ctcctccttccttccttcgtctcc 34
                |||||||||||||||||| |||||
Sbjct: 25845836 ctcctccttccttccttcctctcc 25845813



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 245      cgccgccgccgccacccacc 264
                ||||||||||||||||||||
Sbjct: 23950370 cgccgccgccgccacccacc 23950351



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 226      tcttggcccactccaggatcgccg 249
                ||||||| ||||||||||||||||
Sbjct: 19753483 tcttggcgcactccaggatcgccg 19753506



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 411      ctatttggcatgaacatgaa 430
                ||||||||||||||||||||
Sbjct: 19360751 ctatttggcatgaacatgaa 19360770
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 246      gccgccgccgccacccaccc 265
                ||||||||||||||||||||
Sbjct: 14219742 gccgccgccgccacccaccc 14219761



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 11       ctcctccttccttccttcgt 30
                ||||||||||||||||||||
Sbjct: 12604077 ctcctccttccttccttcgt 12604058
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>gb|AC009094.7|AC009094 Homo sapiens chromosome 16 clone RP11-430C1, complete sequence
          Length = 198781

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    tccttccttccttcgtctcc 34
             ||||||||||||||||||||
Sbjct: 10476 tccttccttccttcgtctcc 10457
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>gb|AC073465.5| Homo sapiens BAC clone RP11-158L8 from 2, complete sequence
          Length = 135752

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 11   ctcctccttccttccttcgt 30
            ||||||||||||||||||||
Sbjct: 5162 ctcctccttccttccttcgt 5181
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>gb|AC091756.3| Sus scrofa clone RP44-13J14, complete sequence
          Length = 152058

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   atggctgccaagggggaggg 184
             ||||||||||||||||||||
Sbjct: 30575 atggctgccaagggggaggg 30594
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>gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosome ul, complete sequence
          Length = 186366

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     cccaggtgccaggacgcagc 76
              ||||||||||||||||||||
Sbjct: 169038 cccaggtgccaggacgcagc 169057
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>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0537A05
          Length = 152396

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     ctcctccttccttccttcgt 30
              ||||||||||||||||||||
Sbjct: 115687 ctcctccttccttccttcgt 115668
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>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0458A05
          Length = 120593

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   gccgccgccgccacccaccc 265
             ||||||||||||||||||||
Sbjct: 15432 gccgccgccgccacccaccc 15451
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>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0003H08
          Length = 142068

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   cgccgccgccgccacccacc 264
             ||||||||||||||||||||
Sbjct: 46124 cgccgccgccgccacccacc 46105
to top
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1003_A09
          Length = 150755

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    ctcctccttccttccttcgtctcc 34
             |||||||||||||||||| |||||
Sbjct: 31623 ctcctccttccttccttcctctcc 31600
to top
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0689E12
          Length = 147516

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     ctcctccttccttccttcgtctcc 34
              |||||||||||||||||| |||||
Sbjct: 118047 ctcctccttccttccttcctctcc 118024
to top
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1328_D07
          Length = 155007

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   tcgccgccgccgccacccac 263
             ||||||||||||||||||||
Sbjct: 18039 tcgccgccgccgccacccac 18058
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>gb|AE005124.1| Halobacterium sp. NRC-1 section 155 of 170 of the complete genome
          Length = 12016

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 238  ccaggatcgccgccgccgcc 257
            ||||||||||||||||||||
Sbjct: 2561 ccaggatcgccgccgccgcc 2580
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 226   tcttggcccactccaggatcgccg 249
             ||||||| ||||||||||||||||
Sbjct: 82434 tcttggcgcactccaggatcgccg 82457
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>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0419H09
          Length = 143533

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   cgccgccgccgccacccacc 264
             ||||||||||||||||||||
Sbjct: 83521 cgccgccgccgccacccacc 83502
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>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0685B10
          Length = 148544

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   ctatttggcatgaacatgaa 430
             ||||||||||||||||||||
Sbjct: 90194 ctatttggcatgaacatgaa 90213
to top
>emb|AJ511345.1|HVU511345 Hordeum vulgare subsp. vulgare mRNA for metallothioneine type2
           (mt2a gene)
          Length = 237

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 tcgccgccgccgccacccac 263
           ||||||||||||||||||||
Sbjct: 113 tcgccgccgccgccacccac 132
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>dbj|AK108015.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-H09, full
           insert sequence
          Length = 473

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 cgccgccgccgccacccacc 264
           ||||||||||||||||||||
Sbjct: 122 cgccgccgccgccacccacc 103
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>dbj|AK063283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-D04, full
           insert sequence
          Length = 1750

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 cgccgccgccgccacccacc 264
           ||||||||||||||||||||
Sbjct: 218 cgccgccgccgccacccacc 199
to top
>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
             sequence
          Length = 140069

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   gccgccgccgccacccaccc 265
             ||||||||||||||||||||
Sbjct: 52734 gccgccgccgccacccaccc 52753
to top
>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208102

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cctccttccttccttcgtct 32
             ||||||||||||||||||||
Sbjct: 87459 cctccttccttccttcgtct 87440
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>emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063G07,
              complete sequence
          Length = 157622

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    gccgccgccgccacccaccc 265
              ||||||||||||||||||||
Sbjct: 107640 gccgccgccgccacccaccc 107659
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>emb|AL731631.2|OSJN00279 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0112E13,
             complete sequence
          Length = 133197

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   gccgccgccgccacccaccc 265
             ||||||||||||||||||||
Sbjct: 42823 gccgccgccgccacccaccc 42842


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,349,720
Number of Sequences: 3902068
Number of extensions: 5349720
Number of successful extensions: 641277
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 638062
Number of HSP's gapped (non-prelim): 3215
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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