Clone Information

BLAST Search Result

Clone Name	bastl32c08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing famil...	34	0.24
2	OGFR_RAT (Q9QXY4) Opioid growth factor receptor (OGFr) (Zeta-typ...	33	0.53
3	FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contain...	32	0.69
4	HMGA2_HUMAN (P52926) High mobility group protein HMGI-C (High mo...	32	0.90
5	ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Aden...	31	1.5
6	CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor	31	1.5
7	HSP1_CHICK (P15340) Sperm histone (Protamine) (Galline)	30	2.6
8	GPH_CAUCR (Q9A5Z2) Phosphoglycolate phosphatase (EC 3.1.3.18) (P...	30	2.6
9	ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenyl...	30	2.6
10	HMGA2_MOUSE (P52927) High mobility group protein HMGI-C (High mo...	30	2.6
11	ARI1A_HUMAN (O14497) AT-rich interactive domain-containing prote...	30	2.6
12	RL4_BACST (P28601) 50S ribosomal protein L4 (BL4)	30	2.6
13	CBP1_CAEEL (P34545) Protein cbp-1	30	2.6
14	PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor	30	3.4
15	PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing famil...	30	3.4
16	CSP_PLAKU (P04922) Circumsporozoite protein precursor (CS)	25	3.6
17	YNIF_AZOBR (P25316) Hypothetical 12.3 kDa protein in nifK-nifY i...	30	4.4
18	PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor t...	30	4.4
19	Y7I9_ENCCU (Q8ST30) Hypothetical protein ECU07_1890/ECU10_0010	29	5.8
20	YB03_ENCCU (Q8SU90) Hypothetical protein ECU11_0030	29	5.8
21	VG38_BPAR1 (Q9G0B4) Receptor recognizing protein (Protein Gp38)	29	5.8
22	DYH1A_CHLRE (Q9SMH3) Dynein-1-alpha heavy chain, flagellar inner...	29	5.8
23	Y604_ENCCU (Q8SVF8) Hypothetical protein ECU06_0040	29	5.8
24	F100A_HUMAN (Q8TB05) Protein FAM100A	29	5.8
25	VMSA_HBVA4 (Q05496) Major surface antigen precursor	29	5.8
26	MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.1...	29	5.8
27	Y6G8_ENCCU (Q8SV57) Hypothetical protein ECU06_1680	29	5.8
28	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	29	7.6
29	GA2L2_HUMAN (Q8NHY3) GAS2-like protein 2 (Growth arrest-specific...	29	7.6
30	Y707_ENCCU (Q8SV54) Hypothetical protein ECU07_0070	29	7.6
31	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	29	7.6
32	Y2645_MYCTU (P71944) Hypothetical protein Rv2645/MT2723	29	7.6
33	PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-co...	29	7.6
34	TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)	29	7.6
35	EDN2_MACFA (Q28470) Endothelin-2 (ET-2) (Preproendothelin-2) (PP...	28	9.9
36	RL4_MYCMS (P61065) 50S ribosomal protein L4	28	9.9
37	RL4_MYCCT (P10135) 50S ribosomal protein L4	28	9.9
38	RL4_LACPL (Q88XY5) 50S ribosomal protein L4	28	9.9
39	EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)	28	9.9
40	TAU_GORGO (Q5YCW0) Microtubule-associated protein tau	28	9.9
41	F100A_MOUSE (Q6P3B2) Protein FAM100A	28	9.9
42	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	28	9.9
43	CA077_HUMAN (Q9Y3Y2) Protein C1orf77	28	9.9
44	CA077_BOVIN (Q3SYW9) Protein C1orf77 homolog	28	9.9
45	OGFR_MOUSE (Q99PG2) Opioid growth factor receptor (OGFr) (Zeta-t...	28	9.9

>PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing family A member 6|
           (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3)
          Length = 1048

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = -2

Query: 151 PLTGTGRRSGERGASDPGEEPPAGARTVGCGEQPVPSXXXXXXLPYGWE 5
           P+   G  +G   AS+PG   P G R  G GEQP          P GW+
Sbjct: 233 PVKANGLPAGPEPASEPGSPYPEGPRVPGGGEQP--------AQPNGWQ 273

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>OGFR_RAT (Q9QXY4) Opioid growth factor receptor (OGFr) (Zeta-type opioid|
           receptor)
          Length = 580

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 154 QPLTGTGRRSGERGASDPGEEPPAGARTVGCG 59
           QPLTG G+   + G+ DP +E     RT G G
Sbjct: 292 QPLTGPGQADKDEGSRDPSQEAGTQGRTCGSG 323

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>FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains:|
           Fibrinopeptide A] (Fragment)
          Length = 966

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -1

Query: 362 P*GTAAAHCGG-DSRPALGRSGAYRVGQGQEERKVVQDGGEEKGKCSCRGVVARDAGGSD 186
           P GT   H GG  +  +L   G+   G G   +     G  + G  S  G  A + G S 
Sbjct: 355 PLGTGVTHDGGVRTSGSLMDGGSSDTGTGGVSKTTTFTGSAQGGSWSTGGSTATNTG-SA 413

Query: 185 RPPPWSTGGNSAPD 144
           +   WSTGG + P+
Sbjct: 414 QGGSWSTGGRTEPN 427

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>HMGA2_HUMAN (P52926) High mobility group protein HMGI-C (High mobility group|
           AT-hook protein 2)
          Length = 109

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 132 GDPASAAPQIRGRNRPREQE 73
           G PA+ APQ RGR RPR+Q+
Sbjct: 17  GQPAAPAPQKRGRGRPRKQQ 36

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>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
           (Ca(2+)-inhibitable adenylyl cyclase)
          Length = 1265

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 22/62 (35%), Positives = 28/62 (45%)
 Frame = -1

Query: 335 GGDSRPALGRSGAYRVGQGQEERKVVQDGGEEKGKCSCRGVVARDAGGSDRPPPWSTGGN 156
           GGD   A G   ++R     +ER     GG++ G+ S R       GGS R PP   GG 
Sbjct: 101 GGDDPLAGGFGFSFRSRSAWQER-----GGDDCGRGSRRRRRGAAGGGSSRAPPAGGGGG 155

Query: 155 SA 150
            A
Sbjct: 156 PA 157

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>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 23/65 (35%), Positives = 28/65 (43%)
 Frame = -3

Query: 291 GRPGARGKKGSTRWWRGEGKV*LPGSGGTRCWRLGQAPAVEHGRELSP*LEPGGDPASAA 112
           G PGA G++G + +    G   +PG  G    R G  PA   G       EPG D     
Sbjct: 476 GLPGAAGERGPSGFRGPAGPNGIPGEKGPPGERGGPGPAGPRGVA----GEPGRDGTPGG 531

Query: 111 PQIRG 97
           P IRG
Sbjct: 532 PGIRG 536

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>HSP1_CHICK (P15340) Sperm histone (Protamine) (Galline)|
          Length = 61

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -2

Query: 475 KNRRTRSRAQCSGVEAARQGGCAATRQNSGTARRKEGSLRAQRRR 341
           + RR RS  + S     R G    +R++ G  RR+ GS R +RRR
Sbjct: 16  RRRRRRSGRRRSPRRRRRYGSARRSRRSVGGRRRRYGSRRRRRRR 60

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>GPH_CAUCR (Q9A5Z2) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)|
          Length = 237

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 151 AEFPPVLHGGGLSEPPASRATTPRQLHFPFSSPPSCTTFLSSCPWP 288
           A  P VL   G +E P         +H     P +C T L+SCP P
Sbjct: 188 AGVPGVLVSFGYTEEPVETLGADLVIHSFLDVPKACITLLTSCPAP 233

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>ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1262

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 29/110 (26%), Positives = 42/110 (38%)
 Frame = -1

Query: 479 PQKPTHKIEGAVQWSGGSTAGRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSG 300
           P  P     G+ + SGG+   +     A +  G  +   P         GD     G   
Sbjct: 43  PHAPGGSTRGSTKRSGGAVTPQQQQRLASRWRGGDDDEDP------PLSGDDPLVGGFGF 96

Query: 299 AYRVGQGQEERKVVQDGGEEKGKCSCRGVVARDAGGSDRPPPWSTGGNSA 150
           ++R     +ER     GG++ G+ S R       GGS R PP    G+SA
Sbjct: 97  SFRSKSAWQER-----GGDDGGRGSRRQRRGAAGGGSTRAPPAGGSGSSA 141

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>HMGA2_MOUSE (P52927) High mobility group protein HMGI-C (High mobility group|
           AT-hook protein 2)
          Length = 108

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 132 GDPASAAPQIRGRNRPREQE 73
           G PA+  PQ RGR RPR+Q+
Sbjct: 17  GQPAAPVPQKRGRGRPRKQQ 36

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>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID|
           domain-containing protein 1A) (SWI/SNF-related,
           matrix-associated, actin-dependent regulator of
           chromatin subfamily F member 1) (SWI-SNF complex protein
           p270) (B120) (SWI-like pr
          Length = 2285

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 26/85 (30%), Positives = 36/85 (42%)
 Frame = -1

Query: 401 EAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGAYRVGQGQEERKVVQDGGEEKGKCSC 222
           +AEQ+  E  G +    AAA  G     A   S    VG  Q   K +QDG E  G    
Sbjct: 26  KAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGPAVGPPQPLGKELQDGAESNGGGGG 85

Query: 221 RGVVARDAGGSDRPPPWSTGGNSAP 147
            G  +    G++ P   ++ GN+ P
Sbjct: 86  GGAGSGGGPGAE-PDLKNSNGNAGP 109

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>RL4_BACST (P28601) 50S ribosomal protein L4 (BL4)|
          Length = 207

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -2

Query: 466 RTRSRAQCSGVEAARQGGCAATRQNSGTARRKEGSLRAQRRRTAGETLDP 317
           +T++RA+ SG      GG    RQ  GT R ++GS+RA + R  G    P
Sbjct: 50  KTKNRAEVSG------GGRKPWRQK-GTGRARQGSIRAPQWRGGGTVFGP 92

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>CBP1_CAEEL (P34545) Protein cbp-1|
          Length = 2056

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
 Frame = -1

Query: 449 AVQWSGGSTAGRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGAYRVGQGQEE 270
           A Q +    A      +A  +  + + R+    AAA   G  R     S      Q  E+
Sbjct: 343 AAQHAAQQQAAAQAQAQAAAQQQQQQQREQEAAAAAQRNGAGRATTPGSSMLATHQDPEK 402

Query: 269 RKVVQDGGE---EKGKCSCRGVVARDAGGSDRPPP 174
           RK++Q          KCS R    RD    ++PPP
Sbjct: 403 RKLIQQQLVLLLHAHKCSQREKENRDFAAKNQPPP 437

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>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor|
          Length = 1943

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +1

Query: 157  FPPVLHGGGLSEPPASRATTPRQLHFPFSSPPSCTTF-LSSCPWPTL*APLRPNAGLESP 333
            F P+ H   L  PP +  T P  L  P   PP   TF L     PT   PL P   L  P
Sbjct: 1748 FAPLPHPP-LPRPPIAFTTFPLPLSPPNPPPPQLVTFSLPISTPPTSSLPLPPPLSLPPP 1806

Query: 334  PQ 339
            P+
Sbjct: 1807 PR 1808

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>PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing family A member 6|
           (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3)
          Length = 1173

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2

Query: 136 GRRSGERGASDPGEEPPAGARTVGCGEQPVPSXXXXXXLPYGWE 5
           G  SG   AS+PG   P G R  G GE P          P GW+
Sbjct: 238 GLPSGPETASEPGSPYPDGPRVPGGGEHP--------AQPNGWQ 273

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>CSP_PLAKU (P04922) Circumsporozoite protein precursor (CS)|
          Length = 351

 Score = 25.4 bits (54), Expect(2) = 3.6
 Identities = 24/81 (29%), Positives = 32/81 (39%)
 Frame = -1

Query: 401 EAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGAYRVGQGQEERKVVQDGGEEKGKCSC 222
           + EQ    A G +P    AA  GG+ +PA G  G       + E+     GGE+    + 
Sbjct: 96  QPEQPAAGAGGEQP----AAGAGGE-QPAAGAGGEQPAAGARGEQPAAGAGGEQPAAGAG 150

Query: 221 RGVVARDAGGSDRPPPWSTGG 159
               A  AGG    P    GG
Sbjct: 151 GEQPAAGAGGEQ--PAAGAGG 169



 Score = 23.1 bits (48), Expect(2) = 3.6
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 7/42 (16%)
 Frame = -2

Query: 154 QPLTGTGRR---SGERG----ASDPGEEPPAGARTVGCGEQP 50
           QP  G G     +G RG    A   GE+P AGA     GEQP
Sbjct: 171 QPAAGAGGEQPAAGARGEQPAAGAGGEQPAAGAG----GEQP 208

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>YNIF_AZOBR (P25316) Hypothetical 12.3 kDa protein in nifK-nifY intergenic|
           region
          Length = 118

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
 Frame = -1

Query: 332 GDSRPALGRSGAYRVGQGQEERKVVQDGGEEKGK--CSCRGVVARDAGGSDRPPPWSTGG 159
           G SRPA G       G G+                 C C+ +  R A   DRPP W+T  
Sbjct: 53  GSSRPAKGSRVTACQGAGRPSASSSSSTPSRARSRCCECQEIRGRCAVFDDRPPDWATSA 112

Query: 158 NSAP 147
            SAP
Sbjct: 113 -SAP 115

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>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC|
            3.1.3.48) (His-domain-containing protein tyrosine
            phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14)
            (PTP-TD14)
          Length = 1636

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +1

Query: 163  PVLHGGGLSEPPA-SRATTPRQLHFPFSSPPSCTTFLSSCPWPTL*APLRPNAGLESPP 336
            PV    G +EPP    A+ P     P SSPP  ++ L   P P    P+ P A    PP
Sbjct: 1516 PVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPV-PEAPSSGPP 1573

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>Y7I9_ENCCU (Q8ST30) Hypothetical protein ECU07_1890/ECU10_0010|
          Length = 433

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/66 (25%), Positives = 26/66 (39%)
 Frame = -1

Query: 476 QKPTHKIEGAVQWSGGSTAGRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGA 297
           QK  H I G ++      A R   D  + R G +E ++     A   GG     +   G 
Sbjct: 279 QKIVHDITGVLELLRSEDADRFFMDAGKYRKGGSERQRMVAIGALETGGQRMTGVVEVGT 338

Query: 296 YRVGQG 279
           ++ G G
Sbjct: 339 FKDGDG 344

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>YB03_ENCCU (Q8SU90) Hypothetical protein ECU11_0030|
          Length = 641

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/66 (25%), Positives = 26/66 (39%)
 Frame = -1

Query: 476 QKPTHKIEGAVQWSGGSTAGRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGA 297
           QK  H I G ++      A R   D  + R G +E ++     A   GG     +   G 
Sbjct: 487 QKIVHDITGVLELLRSEDADRFFMDAGKYRKGGSERQRMVAIGALETGGQRMTGVVEVGT 546

Query: 296 YRVGQG 279
           ++ G G
Sbjct: 547 FKDGDG 552

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>VG38_BPAR1 (Q9G0B4) Receptor recognizing protein (Protein Gp38)|
          Length = 259

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
 Frame = -3

Query: 291 GRPGARGKKGSTRWWRGEGKV*LPGSG---GTRCWRLGQAPAVEHGRELSP*LEPGGDPA 121
           GRP   G     RW  G   +  PG+G   GTR +  G     + G+  +P       P 
Sbjct: 176 GRPFGLGGNNGARWPGGNASLTSPGAGGNTGTRYYAGGGGEVGQPGQYANPGASYSTPPT 235

Query: 120 SAAPQIRGRNRPREQELWAV 61
           S    + G + P  Q + A+
Sbjct: 236 SPGAAVAG-SAPTWQNVGAI 254

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>DYH1A_CHLRE (Q9SMH3) Dynein-1-alpha heavy chain, flagellar inner arm I1 complex|
           (1-alpha DHC) (Dynein-1, subspecies f)
          Length = 4625

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 24  ARAAAAEGTGCSPQPTVLAPAGGSSPGS 107
           A AAAAE  G +P+    APA G++ G+
Sbjct: 113 APAAAAEANGANPEDEAAAPADGAADGA 140

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>Y604_ENCCU (Q8SVF8) Hypothetical protein ECU06_0040|
          Length = 477

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/66 (25%), Positives = 26/66 (39%)
 Frame = -1

Query: 476 QKPTHKIEGAVQWSGGSTAGRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGA 297
           QK  H I G ++      A R   D  + R G +E ++     A   GG     +   G 
Sbjct: 323 QKIVHDITGVLELLRSEDADRFFMDAGKYRKGGSERQRMVAIGALETGGQRMTGVVEVGT 382

Query: 296 YRVGQG 279
           ++ G G
Sbjct: 383 FKDGDG 388

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>F100A_HUMAN (Q8TB05) Protein FAM100A|
          Length = 177

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 172 HGGGLSEPPASRATTPRQLHFPFSSPPSCTTFLSSCPWPTL*AP 303
           H GG   P A+ AT+P   HFP ++    T+  ++  WPT  +P
Sbjct: 92  HSGGSGSPMAATATSPPP-HFPHAA----TSSSAASSWPTAASP 130

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>VMSA_HBVA4 (Q05496) Major surface antigen precursor|
          Length = 399

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 178 GGLSEPPASRATTPRQLHFPFSSPPSCTTFLSSC 279
           GGL   P   + +P   H P S PP+C  +   C
Sbjct: 216 GGLPGCPGQNSQSPTSNHLPTSCPPTCPGYRWMC 249

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>MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 5) (ERK-5) (ERK4)
           (BMK1 kinase)
          Length = 815

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 21/62 (33%), Positives = 24/62 (38%)
 Frame = +3

Query: 279 PLAYPIGSTPTQCGSRVSPAVRRRCALRLPSFRLAVPLFCLVAAQPPCRAASTPLHCALD 458
           PLA P G  P   GS   P  +  C    P+     P   +    PP  A ST L  A  
Sbjct: 608 PLAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQS 667

Query: 459 LV 464
           LV
Sbjct: 668 LV 669

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>Y6G8_ENCCU (Q8SV57) Hypothetical protein ECU06_1680|
          Length = 458

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/66 (25%), Positives = 26/66 (39%)
 Frame = -1

Query: 476 QKPTHKIEGAVQWSGGSTAGRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGA 297
           QK  H I G ++      A R   D  + R G +E ++     A   GG     +   G 
Sbjct: 304 QKIVHDITGVLELLRSEDADRFFMDAGKYRKGGSERQRMVAIGALETGGQRMTGVVEVGT 363

Query: 296 YRVGQG 279
           ++ G G
Sbjct: 364 FKDGDG 369

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>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +3

Query: 24  ARAAAAEGTGCSPQP--TVLAPAGGSSPGS 107
           A  AAA G G SP+P  T  AP+GG+  GS
Sbjct: 39  AALAAAAGGGRSPEPALTPAAPSGGNGSGS 68

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>GA2L2_HUMAN (Q8NHY3) GAS2-like protein 2 (Growth arrest-specific 2-like 2)|
           (GAS2-related protein on chromosome 17) (GAR17 protein)
          Length = 880

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = -2

Query: 475 KNRRTRSRAQCSGVEAARQGGCAATRQNSGTARRKEGSLRAQRRRTAGETLDPHWVGVEP 296
           K+R  R+     G EA+R  G +   +       KE +   +      E L PHW+   P
Sbjct: 812 KDRLLRAVLGSKGGEASRVDGASVGEEEEEGKEEKEPAAPLESSPQPPEGLQPHWLNQAP 871

Query: 295 I 293
           +
Sbjct: 872 L 872

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>Y707_ENCCU (Q8SV54) Hypothetical protein ECU07_0070|
          Length = 615

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/66 (25%), Positives = 25/66 (37%)
 Frame = -1

Query: 476 QKPTHKIEGAVQWSGGSTAGRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGA 297
           QK  H I G ++      A R   D  E   G +E ++     A   GG     +   G 
Sbjct: 461 QKIVHDITGVLELLRSEDADRFFMDAGEHMKGGSERQRMVAIGALETGGQRMTGVVEVGT 520

Query: 296 YRVGQG 279
           ++ G G
Sbjct: 521 FKDGDG 526

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>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 21/65 (32%), Positives = 27/65 (41%)
 Frame = -3

Query: 291 GRPGARGKKGSTRWWRGEGKV*LPGSGGTRCWRLGQAPAVEHGRELSP*LEPGGDPASAA 112
           G PGA G++G+  +    G   +PG  G    R    PA   G       EPG D     
Sbjct: 477 GLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAA----GEPGRDGVPGG 532

Query: 111 PQIRG 97
           P +RG
Sbjct: 533 PGMRG 537

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>Y2645_MYCTU (P71944) Hypothetical protein Rv2645/MT2723|
          Length = 143

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 254 DGGEEKGKCSCRGVVARDAGGSDRPPPWSTGGNSAPDW 141
           D   + G+C+C G    D G +  PPPW   G + P W
Sbjct: 15  DTNGDPGRCAC-GQQLADVGPATPPPPWCEPG-TEPIW 50

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>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing|
            protein 2) (Retinoblastoma protein-interacting
            zinc-finger protein) (Zinc finger protein RIZ)
          Length = 1706

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +1

Query: 208  ATTPRQLHFPFSSPPSCTTFLSSCPWPTL*APLRPNAGLESPPQCAAAVP 357
            A +P ++  P SSPP  T  LSS   P L  P  P++    PP    A P
Sbjct: 929  AESPPEVVGP-SSPPLQTASLSSGQLPPLLTPTEPSSPPPCPPVLTVATP 977

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>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = +1

Query: 139 FQSGAEFPPVLHGGGLSEPPASRATTPRQLHFPFSSPPSCTTFLSSC 279
           F SG   PP    GGL  P    + T R    P SS  SC++  SSC
Sbjct: 238 FPSGHHQPP----GGLESPLLLDSPTSRTPPPPSSSASSCSSSASSC 280

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>EDN2_MACFA (Q28470) Endothelin-2 (ET-2) (Preproendothelin-2) (PPET2)|
           (Fragment)
          Length = 79

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +1

Query: 181 GLSEPPASRATT-PRQLHFPFSSPPSCTTFLSSCPW 285
           GL  PP  R  + PR+     +  PSC TF    PW
Sbjct: 8   GLGNPPRRRRRSLPRRCQCSSARDPSCATFCLRRPW 43

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>RL4_MYCMS (P61065) 50S ribosomal protein L4|
          Length = 208

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 469 RRTRSRAQCSGVEAARQGGCAATRQNSGTARRKEGSLRAQRRRTAGETLDP 317
           ++ ++RA+ SG      GG    +Q  GT R ++GS+RA + +  G T  P
Sbjct: 48  KKVKTRAEVSG------GGRKPWKQK-GTGRARQGSIRAPQWKGGGVTFGP 91

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>RL4_MYCCT (P10135) 50S ribosomal protein L4|
          Length = 208

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 469 RRTRSRAQCSGVEAARQGGCAATRQNSGTARRKEGSLRAQRRRTAGETLDP 317
           ++ ++RA+ SG      GG    +Q  GT R ++GS+RA + +  G T  P
Sbjct: 48  KKVKTRAEVSG------GGRKPWKQK-GTGRARQGSIRAPQWKGGGVTFGP 91

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>RL4_LACPL (Q88XY5) 50S ribosomal protein L4|
          Length = 207

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 430 AARQGGCAATRQNSGTARRKEGSLRAQRRRTAGETLDP 317
           +AR+GG     +  GT R ++GS+R+ + R  G    P
Sbjct: 55  SARRGGGRKPWRQKGTGRARQGSIRSPQWRKGGIVFGP 92

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>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)|
          Length = 427

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/59 (30%), Positives = 25/59 (42%)
 Frame = +1

Query: 160 PPVLHGGGLSEPPASRATTPRQLHFPFSSPPSCTTFLSSCPWPTL*APLRPNAGLESPP 336
           PPV H    S PP   +  P + H+ + SPP      S  P      P + +   +SPP
Sbjct: 39  PPVKH---YSPPPVYHSPPPPKKHYEYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPP 94

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>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau|
          Length = 775

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -1

Query: 395 EQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGAYRVGQGQEERKVVQDG 249
           EQ   +     P GT A   G    P+L    A  V Q  E  KVVQ+G
Sbjct: 86  EQAAAQPHTEIPEGTTAEEAGIGDTPSLEDEAAGHVTQEPESGKVVQEG 134

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>F100A_MOUSE (Q6P3B2) Protein FAM100A|
          Length = 176

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +1

Query: 172 HGGGLSEPPASRATTPRQLHFPFSSPPSCTTFLSSCPWPTL*APLRPNAGLESPPQ 339
           HGGG S  P + + T    HFP +     T   ++  WPT  +P  P    +  PQ
Sbjct: 91  HGGGGSSSPMATSATSPPPHFPHA-----TGSFATPSWPTAASP--PGGPQQHQPQ 139

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>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = +1

Query: 148 GAEFPPVL-HGGGLSEPPASRATTPRQLHFPFSSPPSCTTFLSSCPWPTL-*APLRPNAG 321
           G+ F PVL H   +  P    +     ++ P S PP+      SC WPT   +PL P+  
Sbjct: 330 GSAFHPVLPHYATVPRPLNKNSRPSSPVNTPSSQPPAA----KSCAWPTSNFSPLPPSPP 385

Query: 322 --LESPP 336
             + SPP
Sbjct: 386 IMISSPP 392

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>CA077_HUMAN (Q9Y3Y2) Protein C1orf77|
          Length = 248

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 24/72 (33%), Positives = 30/72 (41%)
 Frame = -1

Query: 419 GRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGAYRVGQGQEERKVVQDGGEE 240
           GR  +     R G   GR   G      GG  R A+GR G    G+G   R     GG  
Sbjct: 142 GRAVAPRMGLRRGGVRGRGGPGR-----GGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRG 196

Query: 239 KGKCSCRGVVAR 204
           +G+   RG +AR
Sbjct: 197 RGRGRGRGALAR 208

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>CA077_BOVIN (Q3SYW9) Protein C1orf77 homolog|
          Length = 248

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 24/72 (33%), Positives = 30/72 (41%)
 Frame = -1

Query: 419 GRLCSDEAEQRDGEAEGRKP*GTAAAHCGGDSRPALGRSGAYRVGQGQEERKVVQDGGEE 240
           GR  +     R G   GR   G      GG  R A+GR G    G+G   R     GG  
Sbjct: 142 GRAVAPRMGLRRGGVRGRGGPGR-----GGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRG 196

Query: 239 KGKCSCRGVVAR 204
           +G+   RG +AR
Sbjct: 197 RGRGRGRGALAR 208

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>OGFR_MOUSE (Q99PG2) Opioid growth factor receptor (OGFr) (Zeta-type opioid|
           receptor)
          Length = 633

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 154 QPLTGTGRRSGERGASDPGEEPPAGARTVGCG 59
           +PL G G+   + G  DP +E     RT G G
Sbjct: 292 RPLMGLGQADKDEGPGDPSQEAGTQGRTCGSG 323


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,600,175
Number of Sequences: 219361
Number of extensions: 1502420
Number of successful extensions: 5622
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5586
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result