Clone Name | bastl32c04 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 17 tttggggctttgactaaaagtcttgagctaaaaa 50 |||||||||||||||||||||||||||||||||| Sbjct: 19140088 tttggggctttgactaaaagtcttgagctaaaaa 19140121
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 17 tttggggctttgactaaaagtcttgagctaaaaa 50 |||||||||||||||||||||||||||||||||| Sbjct: 73608 tttggggctttgactaaaagtcttgagctaaaaa 73641
>gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, complete sequence Length = 214160 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 aaaggtggagatgagtgtggag 330 |||||||||||||||||||||| Sbjct: 102622 aaaggtggagatgagtgtggag 102601
>gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, complete sequence Length = 171343 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 aaaggtggagatgagtgtggag 330 |||||||||||||||||||||| Sbjct: 74388 aaaggtggagatgagtgtggag 74409
>ref|XM_512922.1| PREDICTED: Pan troglodytes similar to NALP5 (LOC456316), mRNA Length = 6615 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 cattcttgctcaagtccagctgtct 295 ||||||||||||||||||| ||||| Sbjct: 3103 cattcttgctcaagtccagatgtct 3079
>emb|CR956406.10| Pig DNA sequence from clone CH242-143L3 on chromosome 17, complete sequence Length = 177073 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 agctcctccgtccctccctcc 87 ||||||||||||||||||||| Sbjct: 65685 agctcctccgtccctccctcc 65705
>gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome 18, complete sequence Length = 215826 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 cgcaagtatgcggtcaaggcc 426 ||||||||||||||||||||| Sbjct: 164168 cgcaagtatgcggtcaaggcc 164188
>ref|NM_176811.2| Homo sapiens NACHT, leucine rich repeat and PYD containing 8 (NALP8), mRNA Length = 3934 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 cattcttgctcaagtccagctgtct 295 ||||||||||||||||||| ||||| Sbjct: 3045 cattcttgctcaagtccagatgtct 3021
>tpg|BK001109.1| TPA: TPA_inf: Homo sapiens NOD16 (NOD16) mRNA, complete cds Length = 3934 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 cattcttgctcaagtccagctgtct 295 ||||||||||||||||||| ||||| Sbjct: 3045 cattcttgctcaagtccagatgtct 3021
>gb|AC160123.2| Mus musculus BAC clone RP23-354J5 from chromosome 9, complete sequence Length = 199457 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcctccgtccctccctcccc 89 ||||||||||||||||||||| Sbjct: 175826 ctcctccgtccctccctcccc 175806
>gb|AY154463.1| Homo sapiens NALP8 (NALP8) mRNA, complete cds Length = 3090 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 cattcttgctcaagtccagctgtct 295 ||||||||||||||||||| ||||| Sbjct: 2917 cattcttgctcaagtccagatgtct 2893
>gb|AC011470.5|AC011470 Homo sapiens chromosome 19 clone CTC-490M10, complete sequence Length = 157141 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 cattcttgctcaagtccagctgtct 295 ||||||||||||||||||| ||||| Sbjct: 89432 cattcttgctcaagtccagatgtct 89456
>gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, complete sequence Length = 233915 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 cgcaagtatgcggtcaaggcc 426 ||||||||||||||||||||| Sbjct: 135253 cgcaagtatgcggtcaaggcc 135273
>ref|XM_513067.1| PREDICTED: Pan troglodytes similar to putative MAPK activating protein (LOC456475), mRNA Length = 850 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 814 tgctcaagtccagctgtctg 795
>gb|AC149604.1| Mus musculus BAC clone RP23-472I3 from chromosome 15, complete sequence Length = 177501 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctccctccccgaaataaaat 99 |||||||||||||||||||| Sbjct: 137380 ctccctccccgaaataaaat 137361
>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete sequence Length = 185010 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 tccctccctccccgaaataaaatc 100 ||||||||||||| |||||||||| Sbjct: 89520 tccctccctccccaaaataaaatc 89543
>gb|AC091295.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-360N5, complete sequence Length = 111108 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctccgtccctccctccc 88 |||||||||||||||||||| Sbjct: 47222 ctcctccgtccctccctccc 47203
>ref|NM_015609.1| Homo sapiens chromosome 1 open reading frame 144 (C1orf144), mRNA Length = 1701 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 539 tgctcaagtccagctgtctg 520
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tgaaagcacgaaatactgca 369 |||||||||||||||||||| Sbjct: 838372 tgaaagcacgaaatactgca 838391
>gb|AC132594.3| Mus musculus BAC clone RP24-222P6 from chromosome 7, complete sequence Length = 162814 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 cctgcgcctcctccagccgatccg 180 |||||||||||||||||| ||||| Sbjct: 137062 cctgcgcctcctccagcccatccg 137039
>gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome 10, complete sequence Length = 194243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctccgtccctccctcccc 89 |||||||||||||||||||| Sbjct: 150365 tcctccgtccctccctcccc 150346
>gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosome 10, complete sequence Length = 154681 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctccgtccctccctccc 88 |||||||||||||||||||| Sbjct: 84404 ctcctccgtccctccctccc 84385
>gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosome 7, complete sequence Length = 161973 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 cctgcgcctcctccagccgatccg 180 |||||||||||||||||| ||||| Sbjct: 73056 cctgcgcctcctccagcccatccg 73033
>gb|AC107024.5| Homo sapiens 3 BAC RP11-447J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180216 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 taaaagtcttgagctaaaaa 50 |||||||||||||||||||| Sbjct: 91066 taaaagtcttgagctaaaaa 91085
>gb|AC121846.3| Mus musculus BAC clone RP24-83D6 from chromosome 15, complete sequence Length = 182309 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ctccctccccgaaataaaat 99 |||||||||||||||||||| Sbjct: 129046 ctccctccccgaaataaaat 129065
>gb|AC121602.2| Mus musculus BAC clone RP23-309B19 from 10, complete sequence Length = 182661 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 ttcaaaggtggagatgagtgtgga 329 ||||||| |||||||||||||||| Sbjct: 172432 ttcaaagctggagatgagtgtgga 172409
>gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, complete sequence Length = 184813 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 26115 tgctcaagtccagctgtctg 26134
>gb|AC005589.1| Homo sapiens BAC clone RP11-161H12 from 7, complete sequence Length = 132077 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctccgtccctccctcccc 89 |||||||||||||||||||| Sbjct: 59500 tcctccgtccctccctcccc 59481
>ref|XM_846908.1| PREDICTED: Canis familiaris similar to putative MAPK activating protein PM20,PM21 isoform 2, transcript variant 1 (LOC608518), mRNA Length = 1836 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 597 tgctcaagtccagctgtctg 578
>ref|XM_859680.1| PREDICTED: Canis familiaris similar to putative MAPK activating protein PM20,PM21 isoform 2, transcript variant 2 (LOC608518), mRNA Length = 1816 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 577 tgctcaagtccagctgtctg 558
>gb|BC039981.1| Mus musculus renal tumor antigen, mRNA (cDNA clone IMAGE:4952067), complete cds Length = 5043 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 2191 tgctcaagtccagctgtctg 2172
>gb|AC145773.1| Pan troglodytes BAC clone RP43-32M11 from 7, complete sequence Length = 190630 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tcctccgtccctccctcccc 89 |||||||||||||||||||| Sbjct: 117539 tcctccgtccctccctcccc 117520
>emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on chromosome 1 Contains the 5' end of a novel gene (KIAA1332), a ribosomal protein L22 (RPL22) pseudogene, a putative MAPK activating protein (DKFZp566C0424), a novel gene (LOC374955) and two CpG islands, complete sequence Length = 124949 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 80548 tgctcaagtccagctgtctg 80529
>gb|AC024886.20| Homo sapiens 3 BAC RP11-25K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173270 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 cagtgaactcttgttcatttcttg 256 ||||||| |||||||||||||||| Sbjct: 112722 cagtgaaatcttgttcatttcttg 112699
>emb|Z74149.1|SCYDL101C S.cerevisiae chromosome IV reading frame ORF YDL101c Length = 1946 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gtacaatatggatgaagctttgaa 353 ||||||||| |||||||||||||| Sbjct: 280 gtacaatatagatgaagctttgaa 257
>emb|X95644.1|SCCHRIVLA S.cerevisiae DNA fragment of 38.5kb from left arm of chromosome IV Length = 38516 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gtacaatatggatgaagctttgaa 353 ||||||||| |||||||||||||| Sbjct: 18670 gtacaatatagatgaagctttgaa 18647
>emb|AL645693.8| Mouse DNA sequence from clone RP23-217N23 on chromosome 13 Contains the 3' end of a novel serine (or cysteine) proteinase inhibitor, clade B (Serpinb) or serine protease inhibitor (Spi) family member, complete sequence Length = 13777 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcctccgtccctccctcccc 89 |||||||||||||||||||| Sbjct: 11183 tcctccgtccctccctcccc 11202
>gb|BC023988.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone MGC:24215 IMAGE:3825796), complete cds Length = 1701 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 539 tgctcaagtccagctgtctg 520
>gb|BC010631.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone IMAGE:3867552), with apparent retained intron Length = 3416 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 494 tgctcaagtccagctgtctg 475
>emb|CR859294.1| Pongo pygmaeus mRNA; cDNA DKFZp468H135 (from clone DKFZp468H135) Length = 3458 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 533 tgctcaagtccagctgtctg 514
>emb|CR857727.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2135 (from clone DKFZp469P2135) Length = 1723 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 584 tgctcaagtccagctgtctg 565
>emb|CR615655.1| full-length cDNA clone CS0DI033YE02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1600 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 501 tgctcaagtccagctgtctg 482
>dbj|AB097046.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM22 Length = 1731 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 572 tgctcaagtccagctgtctg 553
>dbj|AB097045.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM21 Length = 904 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 513 tgctcaagtccagctgtctg 494
>dbj|AB097044.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM20 Length = 904 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 513 tgctcaagtccagctgtctg 494
>dbj|AB097043.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM19 Length = 1585 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 522 tgctcaagtccagctgtctg 503
>dbj|AB097042.1| Homo sapiens mRNA for putative MAPK activating protein, complete cds, clone: PM18 Length = 1585 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 522 tgctcaagtccagctgtctg 503
>emb|CR626328.1| full-length cDNA clone CS0DL006YG15 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1663 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 556 tgctcaagtccagctgtctg 537
>emb|CR624498.1| full-length cDNA clone CS0DI026YO19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1630 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 502 tgctcaagtccagctgtctg 483
>emb|CR619544.1| full-length cDNA clone CS0DE004YJ20 of Placenta of Homo sapiens (human) Length = 1622 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 505 tgctcaagtccagctgtctg 486
>emb|CR619226.1| full-length cDNA clone CS0DC012YM23 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1594 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 517 tgctcaagtccagctgtctg 498
>emb|CR619138.1| full-length cDNA clone CS0DI006YM02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1575 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 504 tgctcaagtccagctgtctg 485
>emb|CR616707.1| full-length cDNA clone CS0DI005YP09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1605 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 504 tgctcaagtccagctgtctg 485
>emb|CR614958.1| full-length cDNA clone CS0DI024YM18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 906 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 557 tgctcaagtccagctgtctg 538
>emb|CR602743.1| full-length cDNA clone CS0DC024YB21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1663 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 567 tgctcaagtccagctgtctg 548
>emb|CR598986.1| full-length cDNA clone CS0DI024YN19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1625 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 520 tgctcaagtccagctgtctg 501
>emb|CR593854.1| full-length cDNA clone CS0DI025YD12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1616 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 517 tgctcaagtccagctgtctg 498
>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence Length = 197420 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cttgttcatttcttggtcct 261 |||||||||||||||||||| Sbjct: 164271 cttgttcatttcttggtcct 164252
>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2) gene, partial cds; and RST and OAT4 genes, complete cds, complete sequence Length = 170114 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 tccctccctccccgaaataaaatc 100 ||||||||||||| |||||||||| Sbjct: 2847 tccctccctccccaaaataaaatc 2870
>gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, complete sequence Length = 203300 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 tccctccctccccgaaataaaatc 100 ||||||||||||| |||||||||| Sbjct: 66585 tccctccctccccaaaataaaatc 66562
>gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190805 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 ttcaaaggtggagatgagtgtgga 329 ||||||| |||||||||||||||| Sbjct: 105042 ttcaaagctggagatgagtgtgga 105019
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tgaaagcacgaaatactgca 369 |||||||||||||||||||| Sbjct: 838370 tgaaagcacgaaatactgca 838389
>gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, complete sequence Length = 194508 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 atggagttctcataaccctc 209 |||||||||||||||||||| Sbjct: 16862 atggagttctcataaccctc 16843
>gb|AC013718.6| Homo sapiens BAC clone RP11-116I17 from 2, complete sequence Length = 177855 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 tggtcctgggcctcttcattcttg 278 ||||| |||||||||||||||||| Sbjct: 101526 tggtcttgggcctcttcattcttg 101503
>gb|AC025423.32| Homo sapiens 12 BAC RP11-611O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 144570 tgctcaagtccagctgtctg 144551
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tgaaagcacgaaatactgca 369 |||||||||||||||||||| Sbjct: 133917 tgaaagcacgaaatactgca 133936
>gb|AC006529.1|AC006529 Homo sapiens clone SCb-20L24 from 7q31, complete sequence Length = 178069 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctccgtccctccctccc 88 |||||||||||||||||||| Sbjct: 79671 ctcctccgtccctccctccc 79652
>emb|BX530412.8| Zebrafish DNA sequence from clone DKEY-42F6 in linkage group 4, complete sequence Length = 218203 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcctccgtccctccctccc 88 |||||||||||||||||||| Sbjct: 44704 ctcctccgtccctccctccc 44685
>emb|AJ295987.1|HSA295987 Homo sapiens mRNA for hypothetical protein (ORF1), clone Telethon(Italy_B41)_Strait01448_FL406 Length = 3429 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 518 tgctcaagtccagctgtctg 499
>gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, complete sequence Length = 185363 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tttggggctttgactaaaag 36 |||||||||||||||||||| Sbjct: 121662 tttggggctttgactaaaag 121643
>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete sequence Length = 160739 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 tccctccctccccgaaataaaatc 100 ||||||||||||| |||||||||| Sbjct: 157893 tccctccctccccaaaataaaatc 157870
>gb|BC065538.1| Homo sapiens chromosome 1 open reading frame 144, mRNA (cDNA clone MGC:70432 IMAGE:6053254), complete cds Length = 954 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 519 tgctcaagtccagctgtctg 500
>dbj|AB231868.1| Nematostella vectensis genes for zinc finger proteins Nv-ZicB, Nv-ZicC, Nv-ZicD, Nv-ZicE, complete cds Length = 177971 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaagtcttgagctaaaaag 51 |||||||||||||||||||| Sbjct: 171453 aaaagtcttgagctaaaaag 171472
>dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874N19, complete sequence Length = 165113 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 actgtgcagtgaactcttgt 246 |||||||||||||||||||| Sbjct: 116096 actgtgcagtgaactcttgt 116077
>gb|AC165340.3| Mus musculus BAC clone RP24-63G4 from chromosome 7, complete sequence Length = 241077 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcctccgtccctccctccc 88 |||||||||||||||||||| Sbjct: 134474 ctcctccgtccctccctccc 134493
>emb|AL050028.1|HSM800362 Homo sapiens mRNA; cDNA DKFZp566C0424 (from clone DKFZp566C0424); partial cds Length = 1651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgctcaagtccagctgtctg 296 |||||||||||||||||||| Sbjct: 518 tgctcaagtccagctgtctg 499
>gb|L25548.1|YSCDUN1A Saccharomyces cerevisiae protein kinase (Dun1) gene, complete cds Length = 2000 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 gtacaatatggatgaagctttgaa 353 ||||||||| |||||||||||||| Sbjct: 1638 gtacaatatagatgaagctttgaa 1661 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,193,787 Number of Sequences: 3902068 Number of extensions: 4193787 Number of successful extensions: 231192 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 230857 Number of HSP's gapped (non-prelim): 335 length of query: 454 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 432 effective length of database: 17,147,199,772 effective search space: 7407590301504 effective search space used: 7407590301504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)