>ref|XM_474811.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3186

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 338 aagataatccatgttgattgctcgaggtggaaaagc 373
           |||||||||||  |||||||||||||||||||||||
Sbjct: 193 aagataatccacattgattgctcgaggtggaaaagc 228

>ref|XM_471880.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3249

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 338 aagataatccatgttgattgctcgaggtggaaaagc 373
           |||||||||||  |||||||||||||||||||||||
Sbjct: 313 aagataatccacattgattgctcgaggtggaaaagc 348

>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04,
              complete sequence
          Length = 173903

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 338    aagataatccatgttgattgctcgaggtggaaaagc 373
              |||||||||||  |||||||||||||||||||||||
Sbjct: 133972 aagataatccacattgattgctcgaggtggaaaagc 133937

>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05,
             complete sequence
          Length = 149134

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 338   aagataatccatgttgattgctcgaggtggaaaagc 373
             |||||||||||  |||||||||||||||||||||||
Sbjct: 18523 aagataatccacattgattgctcgaggtggaaaagc 18488

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 338      aagataatccatgttgattgctcgaggtggaaaagc 373
                |||||||||||  |||||||||||||||||||||||
Sbjct: 15417341 aagataatccacattgattgctcgaggtggaaaagc 15417306



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                   
Query: 338     aagataatccatgttgattgctcgaggtggaaaagc 373
               |||||||||||  |||||||||||||||||||||||
Sbjct: 6855652 aagataatccacattgattgctcgaggtggaaaagc 6855617



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 122/155 (78%)
 Strand = Plus / Minus

                                                                           
Query: 215     gaggatacaagcagtaatgcagacaaggccatctattttgatggatgggaagggctggcc 274
               |||||||| ||||||  |||| | ||| ||||||| ||||| |||||||| || ||||  
Sbjct: 4460803 gaggataccagcagtgctgcacataagtccatctactttgacggatgggatggactgggt 4460744

                                                                           
Query: 275     gcttcgacggtgcttagagacatagccaaagatcctccgccatcgcttctgaagaaattc 334
               || ||  ||||||| ||||  |||||  || ||||  ||||||| ||   ||||||||| 
Sbjct: 4460743 gcgtctgcggtgctcagagcgatagcagaaaatccagcgccatctctgaggaagaaattt 4460684

                                                  
Query: 335     aacaagataatccatgttgattgctcgaggtggaa 369
                ||| ||| ||||||||||| |||||||| |||||
Sbjct: 4460683 gacaggattatccatgttgactgctcgagatggaa 4460649

>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
             sequence
          Length = 140069

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 338   aagataatccatgttgattgctcgaggtggaaaagc 373
             |||||||||||  |||||||||||||||||||||||
Sbjct: 47749 aagataatccacattgattgctcgaggtggaaaagc 47714

>emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063G07,
              complete sequence
          Length = 157622

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 338    aagataatccatgttgattgctcgaggtggaaaagc 373
              |||||||||||  |||||||||||||||||||||||
Sbjct: 106225 aagataatccacattgattgctcgaggtggaaaagc 106190

>emb|AL731631.2|OSJN00279 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0112E13,
             complete sequence
          Length = 133197

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 338   aagataatccatgttgattgctcgaggtggaaaagc 373
             |||||||||||  |||||||||||||||||||||||
Sbjct: 41408 aagataatccacattgattgctcgaggtggaaaagc 41373

>ref|XM_474586.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3039

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                       
Query: 215 gaggatacaagcagtaatgcagacaaggccatctattttgatggatgggaagggctggcc 274
           |||||||| ||||||  |||| | ||| ||||||| ||||| |||||||| || ||||  
Sbjct: 61  gaggataccagcagtgctgcacataagtccatctactttgacggatgggatggactgggt 120

                                                                       
Query: 275 gcttcgacggtgcttagagacatagccaaagatcctccgccatcgcttctgaagaaattc 334
           || ||  ||||||| ||||  |||||  || ||||  ||||||| ||   ||||||||| 
Sbjct: 121 gcgtctgcggtgctcagagcgatagcagaaaatccagcgccatctctgaggaagaaattt 180

                                              
Query: 335 aacaagataatccatgttgattgctcgaggtggaa 369
            ||| ||| ||||||||||| |||||||| |||||
Sbjct: 181 gacaggattatccatgttgactgctcgagatggaa 215

>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23,
             complete sequence
          Length = 150305

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 122/155 (78%)
 Strand = Plus / Minus

                                                                         
Query: 215   gaggatacaagcagtaatgcagacaaggccatctattttgatggatgggaagggctggcc 274
             |||||||| ||||||  |||| | ||| ||||||| ||||| |||||||| || ||||  
Sbjct: 88535 gaggataccagcagtgctgcacataagtccatctactttgacggatgggatggactgggt 88476

                                                                         
Query: 275   gcttcgacggtgcttagagacatagccaaagatcctccgccatcgcttctgaagaaattc 334
             || ||  ||||||| ||||  |||||  || ||||  ||||||| ||   ||||||||| 
Sbjct: 88475 gcgtctgcggtgctcagagcgatagcagaaaatccagcgccatctctgaggaagaaattt 88416

                                                
Query: 335   aacaagataatccatgttgattgctcgaggtggaa 369
              ||| ||| ||||||||||| |||||||| |||||
Sbjct: 88415 gacaggattatccatgttgactgctcgagatggaa 88381

>dbj|AK101349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034N04, full
           insert sequence
          Length = 3654

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                       
Query: 215 gaggatacaagcagtaatgcagacaaggccatctattttgatggatgggaagggctggcc 274
           |||||||| ||||||  |||| | ||| ||||||| ||||| |||||||| || ||||  
Sbjct: 262 gaggataccagcagtgctgcacataagtccatctactttgacggatgggatggactgggt 321

                                                                       
Query: 275 gcttcgacggtgcttagagacatagccaaagatcctccgccatcgcttctgaagaaattc 334
           || ||  ||||||| ||||  |||||  || ||||  ||||||| ||   ||||||||| 
Sbjct: 322 gcgtctgcggtgctcagagcgatagcagaaaatccagcgccatctctgaggaagaaattt 381

                                              
Query: 335 aacaagataatccatgttgattgctcgaggtggaa 369
            ||| ||| ||||||||||| |||||||| |||||
Sbjct: 382 gacaggattatccatgttgactgctcgagatggaa 416

>gb|AC092327.4| Homo sapiens chromosome 16 clone RP11-158I3, complete sequence
          Length = 189756

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 322    tctgaagaaattcaacaagataatccatgttgat 355
              |||||||||||||||||||| | ||| |||||||
Sbjct: 103932 tctgaagaaattcaacaagagattccttgttgat 103965

>emb|AL162273.13| Human DNA sequence from clone RP11-215N21 on chromosome 10 Contains
            the 3' end of a novel gene and a CpG island, complete
            sequence
          Length = 103011

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 55   attgattcatcttgaggtgcatattg 80
            ||||||||||||||||||| ||||||
Sbjct: 1747 attgattcatcttgaggtggatattg 1772

>gb|AC009386.14| Homo sapiens 12 BAC RP11-447I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 164012

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 55    attgattcatcttgaggtgcatattg 80
             ||||||||||||||||||| ||||||
Sbjct: 38324 attgattcatcttgaggtggatattg 38349

>gb|AC018976.7| Homo sapiens chromosome 10 clone RP11-384N23, complete sequence
          Length = 187260

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 55     attgattcatcttgaggtgcatattg 80
              ||||||||||||||||||| ||||||
Sbjct: 187007 attgattcatcttgaggtggatattg 187032

>gb|AC024591.4| Homo sapiens chromosome 16 clone RP11-511G21, complete sequence
          Length = 104680

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 322   tctgaagaaattcaacaagataatccatgttgat 355
             |||||||||||||||||||| | ||| |||||||
Sbjct: 13717 tctgaagaaattcaacaagagattccttgttgat 13750

>gb|AC080008.23| Homo sapiens 3 BAC RP11-615P1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 197883

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    tgacagtttcctttattacag 38
             |||||||||||||||||||||
Sbjct: 31057 tgacagtttcctttattacag 31037

>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 356    tgctcgaggtggaaaagccga 376
              |||||||||||||||||||||
Sbjct: 312752 tgctcgaggtggaaaagccga 312772

>gb|AC006976.2| Homo sapiens PAC clone RP5-1047E14 from 7, complete sequence
          Length = 121492

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 12  tggtcttgacagtttcctttatta 35
           ||||||||||||||||||| ||||
Sbjct: 970 tggtcttgacagtttccttcatta 947

>ref|XM_662723.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80149)
           partial mRNA
          Length = 2154

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 tctgaagaaattcaacaaga 341
           ||||||||||||||||||||
Sbjct: 970 tctgaagaaattcaacaaga 989

>emb|AL359252.17| Human DNA sequence from clone RP11-111H14 on chromosome 6 Contains part
             of the UST gene for uronyl-2-sulfotransferase and two CpG
             islands, complete sequence
          Length = 178929

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   agtatatttatccatacacc 178
             ||||||||||||||||||||
Sbjct: 48039 agtatatttatccatacacc 48058

>emb|CR378678.1| Photobacterium profundum SS9 chromosome 2; segment 4/7
          Length = 349527

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 193    gcaaacaatcatcccttatctaga 216
              |||||||||||||||| |||||||
Sbjct: 313028 gcaaacaatcatccctaatctaga 313005

>emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone B18P24
          Length = 75337

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 243   ccatctattttgatggatgggaagggctggcc 274
             |||||||||||||||| ||||| | |||||||
Sbjct: 18388 ccatctattttgatggttgggatgtgctggcc 18419

>ref|XM_627033.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_1260),
           partial mRNA
          Length = 2160

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 tctgaagaaattcaacaaga 341
           ||||||||||||||||||||
Sbjct: 976 tctgaagaaattcaacaaga 995

>ref|XM_227619.3| PREDICTED: Rattus norvegicus similar to 2810453L12Rik protein
           (predicted) (LOC310807), mRNA
          Length = 2383

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 cttgtgtctgcaaggctttc 126
           ||||||||||||||||||||
Sbjct: 806 cttgtgtctgcaaggctttc 787

>dbj|BS000178.1| Pan troglodytes chromosome 22 clone:RP43-042C06, map 22, complete
             sequences
          Length = 176580

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   attcaaacattagtcatcat 146
             ||||||||||||||||||||
Sbjct: 88253 attcaaacattagtcatcat 88272

>dbj|AP001707.1| Homo sapiens genomic DNA, chromosome 21q, section 51/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    attcaaacattagtcatcat 146
              ||||||||||||||||||||
Sbjct: 272036 attcaaacattagtcatcat 272055

>dbj|AP000884.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B463J19, SOD-AML
              region, complete sequence
          Length = 137955

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    attcaaacattagtcatcat 146
              ||||||||||||||||||||
Sbjct: 115347 attcaaacattagtcatcat 115366


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,064,155
Number of Sequences: 3902068
Number of extensions: 4064155
Number of successful extensions: 73175
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73064
Number of HSP's gapped (non-prelim): 111
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)