Clone Information

BLAST Search Result

Clone Name	bastl32b10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related pr...	103	3e-22
2	DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related pr...	103	3e-22
3	MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor	42	0.001
4	MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Conta...	42	0.001
5	DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-...	39	0.008
6	DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynami...	39	0.008
7	DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like pr...	39	0.010
8	DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynami...	39	0.010
9	DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like pr...	38	0.014
10	DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like pr...	37	0.023
11	DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like pr...	37	0.030
12	DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)	37	0.030
13	DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like pr...	37	0.030
14	DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like pr...	37	0.039
15	MX2_CANFA (Q9N0Y2) Interferon-induced GTP-binding protein Mx2	36	0.067
16	DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5)	35	0.088
17	VPS1_YEAST (P21576) Vacuolar sorting protein 1	35	0.11
18	MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2 (I...	35	0.15
19	VPS1_SCHPO (Q9URZ5) Vacuolar sorting protein 1	35	0.15
20	YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08	34	0.26
21	DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like pr...	34	0.26
22	DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (...	33	0.44
23	DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain)...	33	0.44
24	DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)	33	0.44
25	DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)	33	0.44
26	DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular)...	33	0.44
27	SPN1_SCHPO (O36023) Septin homolog spn1	33	0.57
28	DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)	33	0.57
29	DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)	33	0.57
30	DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)	33	0.57
31	DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)	32	0.74
32	DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)	32	0.74
33	MX1_HUMAN (P20591) Interferon-induced GTP-binding protein Mx1 (I...	31	1.7
34	MX2_MOUSE (Q9WVP9) Interferon-induced GTP-binding protein Mx2	31	1.7
35	MX1_PIG (P27594) Interferon-induced GTP-binding protein Mx1	31	1.7
36	MX1_CANFA (Q9N0Y3) Interferon-induced GTP-binding protein Mx1	31	1.7
37	MX3_RAT (P18590) Interferon-induced GTP-binding protein Mx3	31	1.7
38	MX2_RAT (P18589) Interferon-induced GTP-binding protein Mx2	31	1.7
39	MX1_MOUSE (P09922) Interferon-induced GTP-binding protein Mx1 (I...	31	1.7
40	MX1_SHEEP (P33237) Interferon-induced GTP-binding protein Mx1	31	2.2
41	YJDA_ECOLI (P16694) Hypothetical protein yjdA	31	2.2
42	ENGA_CHRVO (Q7NS92) GTP-binding protein engA	31	2.2
43	MX1_RAT (P18588) Interferon-induced GTP-binding protein Mx1	31	2.2
44	MX1_BOVIN (P79135) Interferon-induced GTP-binding protein Mx1	31	2.2
45	POLN_CHIKS (Q8JUX6) Nonstructural polyprotein (Polyprotein nsP12...	30	2.8
46	MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (E...	30	3.7
47	ENGA_RHILO (Q986D9) GTP-binding protein engA	30	3.7
48	MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 ...	30	3.7
49	GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-asso...	30	4.8
50	MX_ONCMY (Q91192) Interferon-induced GTP-binding protein Mx	30	4.8
51	MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E...	30	4.8
52	MX_PERFL (P20593) Interferon-induced GTP-binding protein Mx (Fra...	29	6.3
53	MX_ANAPL (P33238) Interferon-induced GTP-binding protein Mx	29	6.3
54	CEA_CITFR (P04480) Colicin-A	29	6.3
55	POLN_SFV (P08411) Nonstructural polyprotein (Polyprotein nsP1234...	29	6.3
56	ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-)	29	6.3
57	ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-)	29	6.3
58	ENGA_BRAJA (Q89MZ0) GTP-binding protein engA	29	6.3
59	ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-)	29	8.2
60	Y053_METJA (Q60360) Hypothetical protein MJ0053	29	8.2
61	ERA_BORBU (O51604) GTP-binding protein era homolog	29	8.2
62	ENGB_HALSA (Q9HME0) Probable GTP-binding protein engB	29	8.2
63	ENGA_NEIMB (Q9JZY1) GTP-binding protein engA	29	8.2
64	MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (E...	29	8.2
65	MX_CHICK (Q90597) Interferon-induced GTP-binding protein Mx	29	8.2

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score =  103 bits (257), Expect = 3e-22
 Identities = 52/88 (59%), Positives = 62/88 (70%)
 Frame = +2

Query: 209 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 388
           MEA++ELSQLS+S++Q                    TFLN V LGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMKQAASLLADEDPDETSSSKRPATFLNVVALGNVGAGKSAVLNSLIG 60

Query: 389 HPVLPTXENGATRAPIVVDLQREPGLST 472
           HPVLPT ENGATRAPI+++L RE  LS+
Sbjct: 61  HPVLPTGENGATRAPIIIELSRESSLSS 88

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>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score =  103 bits (256), Expect = 3e-22
 Identities = 53/88 (60%), Positives = 61/88 (69%)
 Frame = +2

Query: 209 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 388
           MEA++ELSQLS+S+RQ                    T LN V LGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMRQAASLLADEDPDETSSSRRPATSLNVVALGNVGAGKSAVLNSLIG 60

Query: 389 HPVLPTXENGATRAPIVVDLQREPGLST 472
           HPVLPT ENGATRAPI++DL RE  LS+
Sbjct: 61  HPVLPTGENGATRAPIIIDLSREESLSS 88

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>MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor|
          Length = 903

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +2

Query: 317 TFLNAVVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           T  + VV+G+  SGKS+VL +++GH  LP   N  TR PI + L
Sbjct: 262 TLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGSNMVTRRPIELTL 305

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>MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Contains: Protein|
           MGM1 isoform 1; Protein MGM1 isoform 2]
          Length = 881

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = +2

Query: 317 TFLNAVVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQREP 460
           T  + VV+G+  SGKS+VL S++G   LP   N  TR PI + L   P
Sbjct: 209 TLPSIVVIGSQSSGKSSVLESIVGREFLPKGSNMVTRRPIELTLVNTP 256

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>DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
          Length = 755

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 332 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           VV+G   SGKS+VL SL+G  +LP      TR P+++ L
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQL 67

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>DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-related|
           protein 1) (Dynamin family member proline-rich
           carboxyl-terminal domain less) (Dymple)
          Length = 742

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 332 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           VV+G   SGKS+VL SL+G  +LP      TR P+++ L
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQL 67

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>DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A)|
           (Dynamin-like protein 1)
          Length = 610

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G   SGKS+VL S++G   LP      TR P+V+ LQ+
Sbjct: 39  VVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLQK 78

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>DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
           (Dnm1p/Vps1p-like protein) (DVLP) (Dynamin family member
           proline-rich carboxyl-terminal domain less) (Dymple)
           (Dynamin-related protein 1) (Dynamin-like protein 4)
           (Dynamin-li
          Length = 736

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 332 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           VV+G   SGKS+VL SL+G  +LP      TR P+++ L
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQL 67

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>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)|
           (Dynamin-like protein 2a)
          Length = 808

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +2

Query: 332 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           VV+G+  SGKS+VL +L+G   LP   +  TR P+V+ L
Sbjct: 63  VVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQL 101

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>DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like protein D)|
           (Dynamin-like protein DLP3)
          Length = 612

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +2

Query: 326 NAVVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           +  V+G   SGKS+VL S++G   LP      TR P+V+ L +
Sbjct: 37  SVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHK 79

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>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)|
          Length = 610

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G   SGKS+VL S++G   LP      TR P+V+ L R
Sbjct: 39  VVGGQSSGKSSVLESVVGKDFLPRGAGIVTRRPLVLQLHR 78

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>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)|
          Length = 691

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   SGKS+VL SL+G  +LP      TR P+++ L
Sbjct: 30  VVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQL 67

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>DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like protein E)|
           (Dynamin-like protein 4) (Dynamin-like protein DLP2)
          Length = 624

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G   SGKS+VL S++G   LP      TR P+V+ L +
Sbjct: 45  VVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHK 84

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>DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like protein C)|
           (Dynamin-like protein 5) (Dynamin-like protein DLP1)
          Length = 614

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G   SGKS+VL S++G   LP      TR P+V+ L +
Sbjct: 40  VVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHK 79

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>MX2_CANFA (Q9N0Y2) Interferon-induced GTP-binding protein Mx2|
          Length = 711

 Score = 35.8 bits (81), Expect = 0.067
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQREP 460
           V+G+  SGKS+VL +L G   LP      TR P+V+ L+R+P
Sbjct: 123 VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLKRDP 163

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>DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5)|
          Length = 757

 Score = 35.4 bits (80), Expect = 0.088
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G+  SGKS++L +L+G   LP      TR P+V+ L
Sbjct: 33  VVGSQSSGKSSILETLVGRDFLPRGTGIVTRRPLVLQL 70

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>VPS1_YEAST (P21576) Vacuolar sorting protein 1|
          Length = 704

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G+  SGKS+VL +++G   LP      TR P+V+ L
Sbjct: 34  VVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQL 71

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>MX2_HUMAN (P20592) Interferon-induced GTP-binding protein Mx2|
           (Interferon-regulated resistance GTP-binding protein
           MxB) (p78-related protein)
          Length = 715

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQREP 460
           V+G+  SGKS+VL +L G   LP      TR P+V+ L+++P
Sbjct: 123 VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLKKQP 163

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>VPS1_SCHPO (Q9URZ5) Vacuolar sorting protein 1|
          Length = 678

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQREPGLS 469
           V+ +  SGKS+VL +++G   LP      TR P+V+ L   P  S
Sbjct: 32  VVRSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRPSAS 76

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>YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08|
          Length = 781

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 332 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           VV+G+   GKS+VL +++G   LP      TR P+++ L
Sbjct: 30  VVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPLILQL 68

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>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)|
          Length = 780

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G+  SGKS+VL +L+G   LP   +  TR P+ + L
Sbjct: 48  VVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLRLQL 85

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>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 848

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 859

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+V+ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQL 73

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>SPN1_SCHPO (O36023) Septin homolog spn1|
          Length = 469

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 326 NAVVLGNVGSGKSAVLNSLIGHPVLPTXENGAT 424
           N +VLG  GSGKS ++N+L+   V P  +   T
Sbjct: 97  NVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLT 129

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>DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQL 73

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>DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)|
          Length = 870

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQL 73

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>DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 36  VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQL 73

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>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)|
          Length = 877

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 31  VVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQL 68

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>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)|
          Length = 830

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDL 448
           V+G   +GKS+VL + +G   LP      TR P+++ L
Sbjct: 38  VVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQL 75

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>MX1_HUMAN (P20591) Interferon-induced GTP-binding protein Mx1|
           (Interferon-regulated resistance GTP-binding protein
           MxA) (Interferon-induced protein p78) (IFI-78K)
          Length = 661

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 74  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLKK 112

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>MX2_MOUSE (Q9WVP9) Interferon-induced GTP-binding protein Mx2|
          Length = 655

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 68  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLRK 106

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>MX1_PIG (P27594) Interferon-induced GTP-binding protein Mx1|
          Length = 663

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 75  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLKK 113

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>MX1_CANFA (Q9N0Y3) Interferon-induced GTP-binding protein Mx1|
          Length = 657

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 71  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLKK 109

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>MX3_RAT (P18590) Interferon-induced GTP-binding protein Mx3|
          Length = 659

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 73  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLKK 111

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>MX2_RAT (P18589) Interferon-induced GTP-binding protein Mx2|
          Length = 659

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 73  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLKK 111

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>MX1_MOUSE (P09922) Interferon-induced GTP-binding protein Mx1 (Influenza|
           resistance protein)
          Length = 631

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 41  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLRK 79

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>MX1_SHEEP (P33237) Interferon-induced GTP-binding protein Mx1|
          Length = 654

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 70  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLRLKK 108

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>YJDA_ECOLI (P16694) Hypothetical protein yjdA|
          Length = 742

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVV---DLQREPGLSTS 475
           ++G + +GKS  +N+++G  VLP      T  P ++     Q+EP L  S
Sbjct: 74  IVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFS 123

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>ENGA_CHRVO (Q7NS92) GTP-binding protein engA|
          Length = 469

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHP-VLPTXENGATRAPIVVDLQRE 457
           V+G    GKS ++N+++G   V+   + G TR  I +D +RE
Sbjct: 179 VIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFERE 220

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>MX1_RAT (P18588) Interferon-induced GTP-binding protein Mx1|
          Length = 652

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 66  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLKLKQ 104

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>MX1_BOVIN (P79135) Interferon-induced GTP-binding protein Mx1|
          Length = 648

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+V+ L++
Sbjct: 64  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLVLRLKK 102

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>POLN_CHIKS (Q8JUX6) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
           (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.
          Length = 2474

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQREPGLSTS 475
           V G  GSGKSA++ +L+    L T         I  D+ R+ GL  S
Sbjct: 719 VFGVPGSGKSAIIKNLVTRQDLVTSGKKENCQEITTDVMRQRGLEIS 765

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>MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 8)
           (ATP-energized glutathione S-conjugate pump 8)
          Length = 1466

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 323 LNAVVLGNVGSGKSAVLNSLIG 388
           +N  + G VGSGKS++L+S++G
Sbjct: 630 MNVAICGTVGSGKSSLLSSILG 651

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>ENGA_RHILO (Q986D9) GTP-binding protein engA|
          Length = 479

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 323 LNAVVLGNVGSGKSAVLNSLIGHPVLPTX-ENGATRAPIVVD 445
           +   V+G   +GKS ++N+LIG   L T  E G TR  I VD
Sbjct: 208 MRIAVVGRPNAGKSTLINALIGEERLLTGPEAGITRDSISVD 249

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>MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 11)
           (ATP-energized glutathione S-conjugate pump 11)
          Length = 1194

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIG 388
           V+G VGSGK+++LNSL+G
Sbjct: 384 VIGEVGSGKTSLLNSLLG 401

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>GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-associated|
           nucleotide 4-like 1 protein) (Immunity-associated
           protein 3) (IAN-5)
          Length = 307

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 323 LNAVVLGNVGSGKSAVLNSLIGHPV 397
           L  +++G  G GKSA  NS++G PV
Sbjct: 28  LRIILVGKTGCGKSATGNSILGQPV 52

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>MX_ONCMY (Q91192) Interferon-induced GTP-binding protein Mx|
          Length = 621

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQRE 457
           V+G+  SGKS+VL +L G   LP      TR P+ + ++R+
Sbjct: 39  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLELKMKRK 78

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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 7)
           (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 323 LNAVVLGNVGSGKSAVLNSLIG 388
           +N  + G VGSGKS++L+S++G
Sbjct: 653 MNIAICGTVGSGKSSLLSSILG 674

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>MX_PERFL (P20593) Interferon-induced GTP-binding protein Mx (Fragment)|
          Length = 301

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP      TR P+ + ++R
Sbjct: 40  VIGDQSSGKSSVLEALSG-VALPRGSGIVTRCPLELKMKR 78

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>MX_ANAPL (P33238) Interferon-induced GTP-binding protein Mx|
          Length = 721

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQREP 460
           V+G+  SGKS++L +L G   LP      TR P+ + L++ P
Sbjct: 136 VIGDQSSGKSSILEALSG-VSLPRGNGIVTRCPLELKLKKIP 176

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>CEA_CITFR (P04480) Colicin-A|
          Length = 592

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 350 GSGKSAVLNSLIGHPVLPTXENGATRAPI 436
           G G + VLNSL+ +PV P  +NG  ++P+
Sbjct: 91  GRGFTRVLNSLVNNPVSPAGQNGG-KSPV 118

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>POLN_SFV (P08411) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
           (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.15
          Length = 2432

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQREPGLSTSLSCCRSI 496
           V G  GSGKSA++ SL+    L T         IV D+++  GL        SI
Sbjct: 721 VFGVPGSGKSAIIKSLVTKHDLVTSGKKENCQEIVNDVKKHRGLDIQAKTVDSI 774

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>ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-)|
          Length = 359

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 338 LGNVGSGKSAVLNSLIGHPVLPTXE 412
           LG+ G+GKS ++NSL+G  +  T E
Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224

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>ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-)|
          Length = 359

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 338 LGNVGSGKSAVLNSLIGHPVLPTXE 412
           LG+ G+GKS ++NSL+G  +  T E
Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224

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>ENGA_BRAJA (Q89MZ0) GTP-binding protein engA|
          Length = 460

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +2

Query: 323 LNAVVLGNVGSGKSAVLNSLIGHP-VLPTXENGATRAPIVVDL 448
           +   ++G   +GKS ++N L+G   +L + E G TR  I V++
Sbjct: 188 IRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVEI 230

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>ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-)|
          Length = 346

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 332 VVLGNVGSGKSAVLNSLIGHPVLPTXE 412
           V+LG+ G GKS+ +NSL G  ++ T E
Sbjct: 187 VLLGSSGVGKSSFINSLAGADLMKTSE 213

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>Y053_METJA (Q60360) Hypothetical protein MJ0053|
          Length = 227

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSL-IGHPVLPTXENGATRAPIVVDL 448
           + G  G GK+ +LN L   HPV+   E   TR  I+ DL
Sbjct: 15  LFGKTGCGKTEILNELKKHHPVIDIEEIARTRGSILGDL 53

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>ERA_BORBU (O51604) GTP-binding protein era homolog|
          Length = 290

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 329 AVVLGNVGSGKSAVLNSLIGHPV 397
           A +LG   +GKS +LNS+ GH +
Sbjct: 6   AAILGRPSTGKSTLLNSICGHKI 28

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>ENGB_HALSA (Q9HME0) Probable GTP-binding protein engB|
          Length = 206

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 332 VVLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQREPGLSTSL 478
           V++G    GKS ++ ++ GH V    + G TR P   D   E  + T L
Sbjct: 13  VLVGRSNVGKSTLMRAVTGHQVPTGQKPGVTRQPNHFDWASEDFMLTDL 61

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>ENGA_NEIMB (Q9JZY1) GTP-binding protein engA|
          Length = 485

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXE-NGATRAPIVVDLQRE 457
           V+G    GKS ++N+++G   + T +  G TR  I +D +RE
Sbjct: 180 VIGRPNVGKSTLVNAILGEERVITFDMAGTTRDSIHIDFERE 221

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>MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 3)
           (ATP-energized glutathione S-conjugate pump 3)
          Length = 1514

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 323 LNAVVLGNVGSGKSAVLNSLIG 388
           +   V G VGSGKS++L+SL+G
Sbjct: 669 MKVAVCGTVGSGKSSLLSSLLG 690

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>MX_CHICK (Q90597) Interferon-induced GTP-binding protein Mx|
          Length = 705

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +2

Query: 335 VLGNVGSGKSAVLNSLIGHPVLPTXENGATRAPIVVDLQR 454
           V+G+  SGKS+VL +L G   LP  +   TR P+ + L++
Sbjct: 119 VIGDRNSGKSSVLEALSG-VALPRDKGVITRCPLELKLKK 157


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.132    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,759,860
Number of Sequences: 219361
Number of extensions: 430200
Number of successful extensions: 2221
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 2129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2216
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result