>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0023F01, complete sequence
          Length = 145009

 Score =  113 bits (57), Expect = 4e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                         
Query: 292   aggagggtgaggcgccggcgagagcttgctggcaaccccgcagaggggttctcagtcgcc 351
             |||||||||||||| ||||| ||||| || |||||| |||| ||||||||||| | ||||
Sbjct: 76391 aggagggtgaggcggcggcgggagctcgcgggcaacaccgcggaggggttctccgccgcc 76450

                                                              
Query: 352   ggtgatggcgcgcggcggctgcgcacccacctgtggcatgcaaagaggt 400
             || || |||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 76451 ggcgacggcgcgcggcggctgcgcacgcacctgtggcacgccaagaggt 76499



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 171   gcagccccgcaccgcacgccgccgcaccacggggcacctcccctccaa 218
             |||||||||| |||| ||||||||||||||||| ||||||||||||||
Sbjct: 76270 gcagccccgctccgcgcgccgccgcaccacgggccacctcccctccaa 76317

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  113 bits (57), Expect = 4e-22
 Identities = 96/109 (88%)
 Strand = Plus / Minus

                                                                            
Query: 292      aggagggtgaggcgccggcgagagcttgctggcaaccccgcagaggggttctcagtcgcc 351
                |||||||||||||| ||||| ||||| || |||||| |||| ||||||||||| | ||||
Sbjct: 26513329 aggagggtgaggcggcggcgggagctcgcgggcaacaccgcggaggggttctccgccgcc 26513270

                                                                 
Query: 352      ggtgatggcgcgcggcggctgcgcacccacctgtggcatgcaaagaggt 400
                || || |||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 26513269 ggcgacggcgcgcggcggctgcgcacgcacctgtggcacgccaagaggt 26513221



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                                
Query: 171      gcagccccgcaccgcacgccgccgcaccacggggcacctcccctccaa 218
                |||||||||| |||| ||||||||||||||||| ||||||||||||||
Sbjct: 26513450 gcagccccgctccgcgcgccgccgcaccacgggccacctcccctccaa 26513403

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  113 bits (57), Expect = 4e-22
 Identities = 96/109 (88%)
 Strand = Plus / Minus

                                                                            
Query: 292      aggagggtgaggcgccggcgagagcttgctggcaaccccgcagaggggttctcagtcgcc 351
                |||||||||||||| ||||| ||||| || |||||| |||| ||||||||||| | ||||
Sbjct: 26838593 aggagggtgaggcggcggcgggagctcgcgggcaacaccgcggaggggttctccgccgcc 26838534

                                                                 
Query: 352      ggtgatggcgcgcggcggctgcgcacccacctgtggcatgcaaagaggt 400
                || || |||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 26838533 ggcgacggcgcgcggcggctgcgcacgcacctgtggcacgccaagaggt 26838485



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                                
Query: 171      gcagccccgcaccgcacgccgccgcaccacggggcacctcccctccaa 218
                |||||||||| |||| ||||||||||||||||| ||||||||||||||
Sbjct: 26838714 gcagccccgctccgcgcgccgccgcaccacgggccacctcccctccaa 26838667

>gb|AY907537.1| Uncultured bacterial symbiont of Discodermia dissoluta polyketide
             synthesis gene cluster, partial sequence
          Length = 124311

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 158   gcggccgcttccagcagccccgc 180
             |||||||||||||||||||||||
Sbjct: 29376 gcggccgcttccagcagccccgc 29354



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 160   ggccgcttccagcagccccgc 180
             |||||||||||||||||||||
Sbjct: 49495 ggccgcttccagcagccccgc 49475

>emb|AL591390.8| Mouse DNA sequence from clone RP23-355L10 on chromosome 11, complete
             sequence
          Length = 186134

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 11    cctaaaccctcacaaacccttcc 33
             |||||||||||||||||||||||
Sbjct: 76779 cctaaaccctcacaaacccttcc 76757

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 196    accacggggcacctcccctccaagcgccg 224
              ||||||||| |||||| ||||||||||||
Sbjct: 621525 accacggggaacctccgctccaagcgccg 621553

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     gcccccgccaccgcggcagc 82
              ||||||||||||||||||||
Sbjct: 135989 gcccccgccaccgcggcagc 135970

>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence
          Length = 254081

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    ggccaggctcccgaggaggg 269
              ||||||||||||||||||||
Sbjct: 116091 ggccaggctcccgaggaggg 116072

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 177     ccgcaccgcacgccgccgcaccac 200
               |||| |||||||||||||||||||
Sbjct: 1272573 ccgcgccgcacgccgccgcaccac 1272550

>ref|XM_415827.1| PREDICTED: Gallus gallus similar to myosin 18A isoform a; myosin
           18A; myosin containing PDZ domain (LOC417581), mRNA
          Length = 7860

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 63  gcccccgccaccgcggcagctgga 86
           ||||||| ||||||||||||||||
Sbjct: 576 gcccccggcaccgcggcagctgga 599

>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    ggcggcgcggtgcccccgccaccg 75
             ||||||| ||||||||||||||||
Sbjct: 53536 ggcggcgaggtgcccccgccaccg 53559

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 352     ggtgatggcgcgcggcggct 371
               ||||||||||||||||||||
Sbjct: 2509903 ggtgatggcgcgcggcggct 2509922

>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   ggtgatggcgcgcggcggct 371
             ||||||||||||||||||||
Sbjct: 15882 ggtgatggcgcgcggcggct 15901

>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   ggcgcgcggcggctgcgcac 377
             ||||||||||||||||||||
Sbjct: 87627 ggcgcgcggcggctgcgcac 87608

>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     ggccgcttccagcagccccg 179
               ||||||||||||||||||||
Sbjct: 1402114 ggccgcttccagcagccccg 1402133



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    ggccgcttccagcagccccg 179
              ||||||||||||||||||||
Sbjct: 914859 ggccgcttccagcagccccg 914878

>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence
          Length = 35427

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 349  gccggtgatggcgcgcggcg 368
            ||||||||||||||||||||
Sbjct: 6531 gccggtgatggcgcgcggcg 6512

>gb|L49337.2|RHMMOTB Sinorhizobium meliloti FlgC (flgC) gene, partial cds; FliE (fliE),
            FlgG (flgG), FlgA (flgA), FlgI (flgI), FlgH (flgH), FliL
            (fliL), FliP (fliP), FlaA (flaA), FlaB (flaB), FlaC
            (flaC), FlaD (flaD), MotB (motB), MotC (motC), MotD
            (motD), and transcriptional regulator genes, complete
            cds; and unknown genes
          Length = 19824

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  ggccgcttccagcagccccg 179
            ||||||||||||||||||||
Sbjct: 9304 ggccgcttccagcagccccg 9285

>dbj|AK158245.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930045J08 product:hypothetical
           Proline-rich region profile containing protein, full
           insert sequence
          Length = 2335

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 ggccaggctcccgaggaggg 269
           ||||||||||||||||||||
Sbjct: 236 ggccaggctcccgaggaggg 255

>dbj|AK165809.1| Mus musculus 16 days neonate male medulla oblongata cDNA, RIKEN
           full-length enriched library, clone:G630090C24
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 2551

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 ggccaggctcccgaggaggg 269
           ||||||||||||||||||||
Sbjct: 233 ggccaggctcccgaggaggg 252

>dbj|AK160932.1| Mus musculus 18 days pregnant adult female placenta and extra
           embryonic tissue cDNA, RIKEN full-length enriched
           library, clone:3830612G08 product:hypothetical
           Proline-rich region profile containing protein, full
           insert sequence
          Length = 2165

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 ggccaggctcccgaggaggg 269
           ||||||||||||||||||||
Sbjct: 158 ggccaggctcccgaggaggg 177

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 352     ggtgatggcgcgcggcggct 371
               ||||||||||||||||||||
Sbjct: 3669698 ggtgatggcgcgcggcggct 3669679



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    ggcgcgcggcggctgcgcac 377
              ||||||||||||||||||||
Sbjct: 164362 ggcgcgcggcggctgcgcac 164381

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 52       ggcggcgcggtgcccccgccaccg 75
                ||||||| ||||||||||||||||
Sbjct: 24932951 ggcggcgaggtgcccccgccaccg 24932974



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 358      ggcgcgcggcggctgcgcac 377
                ||||||||||||||||||||
Sbjct: 20653193 ggcgcgcggcggctgcgcac 20653174

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 48       tggcggcggcgcggtgcccccgcc 71
                ||||||||||| ||||||||||||
Sbjct: 39798805 tggcggcggcgaggtgcccccgcc 39798828

>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0470A12
          Length = 185095

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 48     tggcggcggcgcggtgcccccgcc 71
              ||||||||||| ||||||||||||
Sbjct: 149704 tggcggcggcgaggtgcccccgcc 149727

>ref|NM_001033206.1| Mus musculus PWWP domain containing 2 (Pwwp2), mRNA
          Length = 2335

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 ggccaggctcccgaggaggg 269
           ||||||||||||||||||||
Sbjct: 236 ggccaggctcccgaggaggg 255

>gb|AF091043.1|AF091043 Coturnix coturnix japonica POU-box protein brain-2 mRNA, complete cds
          Length = 1466

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  cacgccgccgcaccacgggg 204
            ||||||||||||||||||||
Sbjct: 1279 cacgccgccgcaccacgggg 1298

>gb|AF102868.1| Hordeum vulgare subsp. vulgare beta-D-glucan exohydrolase isoenzyme
            ExoI mRNA, complete cds
          Length = 2161

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  cgcaccgcacgccgccgcac 197
            ||||||||||||||||||||
Sbjct: 1649 cgcaccgcacgccgccgcac 1630

>gb|U40823.1|ABU40823 Azospirillum brasilense galactose binding protein regulator (gbpR)
           gene and sugar binding protein precursor (chvE) gene,
           complete cds
          Length = 2358

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  ggctggcggcggcgcggtgc 64
           ||||||||||||||||||||
Sbjct: 197 ggctggcggcggcgcggtgc 178

>gb|U95961.1|MMU95961 Mus musculus Snail zinc finger protein (Sna) gene, promoter region
           and partial cds
          Length = 987

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  aatggctggcggcggcgcgg 61
           ||||||||||||||||||||
Sbjct: 729 aatggctggcggcggcgcgg 710

>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete
             sequence
          Length = 202686

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aatggctggcggcggcgcgg 61
             ||||||||||||||||||||
Sbjct: 94164 aatggctggcggcggcgcgg 94145


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,613,837
Number of Sequences: 3902068
Number of extensions: 2613837
Number of successful extensions: 53200
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52545
Number of HSP's gapped (non-prelim): 655
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)