>ref|XM_473853.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2337

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 468 tgggtgcgccgctccagggagggctactacctgcagctct 507
           ||||| |||||| ||||||||||||||||||| |||||||
Sbjct: 316 tgggtccgccgcgccagggagggctactacctccagctct 355

>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10,
              complete sequence
          Length = 150551

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 468    tgggtgcgccgctccagggagggctactacctgcagctct 507
              ||||| |||||| ||||||||||||||||||| |||||||
Sbjct: 105901 tgggtccgccgcgccagggagggctactacctccagctct 105940

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 468      tgggtgcgccgctccagggagggctactacctgcagctct 507
                ||||| |||||| ||||||||||||||||||| |||||||
Sbjct: 31008528 tgggtccgccgcgccagggagggctactacctccagctct 31008567

>dbj|AK120898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030I02, full
           insert sequence
          Length = 2788

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 468 tgggtgcgccgctccagggagggctactacctgcagctct 507
           ||||| |||||| ||||||||||||||||||| |||||||
Sbjct: 454 tgggtccgccgcgccagggagggctactacctccagctct 493

>gb|AC116033.3| Zea mays genomic clone ZM15C05 sequence, complete sequence
          Length = 99606

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 390   gcaacagcctccaccgccaccac 412
             |||||||||||||||||||||||
Sbjct: 82183 gcaacagcctccaccgccaccac 82205

>gb|U11059.1|ZMU11059 Zea mays A188 retrotransposon gag gene, complete cds
          Length = 7313

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 390  gcaacagcctccaccgccaccac 412
            |||||||||||||||||||||||
Sbjct: 2009 gcaacagcctccaccgccaccac 2031

>gb|AY967686.1| Schmidtea mediterranea clone NBE.7.10A mRNA sequence
          Length = 1137

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 10  gcaagttgccattctcttctct 31
           ||||||||||||||||||||||
Sbjct: 761 gcaagttgccattctcttctct 740

>gb|AE003417.4| Drosophila melanogaster chromosome X, section 1 of 74 of the complete
             sequence
          Length = 387740

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 19    cattctcttctcttcttcccac 40
             ||||||||||||||||||||||
Sbjct: 88512 cattctcttctcttcttcccac 88491

>dbj|D45857.1|SOYCHLI Soybean mRNA for Mg chelatase subunit (46 kD), complete cds
          Length = 1953

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 13  agttgccattctcttctcttct 34
           ||||||||||||||||||||||
Sbjct: 542 agttgccattctcttctcttct 563

>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057E15, complete sequence
          Length = 149035

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    ttgccattctcttctcttctt 35
             |||||||||||||||||||||
Sbjct: 80444 ttgccattctcttctcttctt 80464

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 15       ttgccattctcttctcttctt 35
                |||||||||||||||||||||
Sbjct: 16439845 ttgccattctcttctcttctt 16439865

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 462     gacacctgggtgcgccgctccaggg 486
               |||||||||||||||||| ||||||
Sbjct: 5490810 gacacctgggtgcgccgcgccaggg 5490834



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 396     gcctccaccgccaccacggc 415
               ||||||||||||||||||||
Sbjct: 1333634 gcctccaccgccaccacggc 1333615

>emb|CR942785.2| Xenopus tropicalis finished cDNA, clone TEgg083i14
          Length = 2732

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 392 aacagcctccaccgccaccac 412
           |||||||||||||||||||||
Sbjct: 343 aacagcctccaccgccaccac 363

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 15       ttgccattctcttctcttctt 35
                |||||||||||||||||||||
Sbjct: 16530849 ttgccattctcttctcttctt 16530869

>ref|XM_590378.2| PREDICTED: Bos taurus similar to neurofascin (LOC512796), mRNA
          Length = 4848

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 393  acagcctccaccgccaccac 412
            ||||||||||||||||||||
Sbjct: 3490 acagcctccaccgccaccac 3509

>gb|AC163619.2| Mus musculus BAC clone RP24-164P4 from chromosome 9, complete sequence
          Length = 161793

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   ctccagggagggctactacc 498
             ||||||||||||||||||||
Sbjct: 30789 ctccagggagggctactacc 30808

>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    cggcaccggcgtcgtccgcc 452
              ||||||||||||||||||||
Sbjct: 242000 cggcaccggcgtcgtccgcc 241981

>gb|AC091184.6| Homo sapiens chromosome 8, clone RP11-353O11, complete sequence
          Length = 142867

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    ttctcttctcttcttcccac 40
             ||||||||||||||||||||
Sbjct: 63498 ttctcttctcttcttcccac 63479

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 15       ttgccattctcttctcttcttccc 38
                ||||||| ||||||||||||||||
Sbjct: 20112148 ttgccatactcttctcttcttccc 20112125

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     gcgccgcctcccccggcgcc 238
               ||||||||||||||||||||
Sbjct: 7033592 gcgccgcctcccccggcgcc 7033573

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 463     acacctgggtgcgccgctcc 482
               ||||||||||||||||||||
Sbjct: 4891184 acacctgggtgcgccgctcc 4891203

>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0495C02
          Length = 151467

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gcgccgcctcccccggcgcc 238
             ||||||||||||||||||||
Sbjct: 37011 gcgccgcctcccccggcgcc 36992

>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0470A03
          Length = 133167

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    gcgccgcctcccccggcgcc 238
              ||||||||||||||||||||
Sbjct: 127214 gcgccgcctcccccggcgcc 127195

>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1188_F05
          Length = 117045

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    ttgccattctcttctcttcttccc 38
             ||||||| ||||||||||||||||
Sbjct: 58694 ttgccatactcttctcttcttccc 58671

>gb|AC131718.5| Mus musculus BAC clone RP23-171B16 from 6, complete sequence
          Length = 199299

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 17     gccattctcttctcttcttcccac 40
              ||||||| ||||||||||||||||
Sbjct: 108158 gccattcccttctcttcttcccac 108181

>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 391     caacagcctccaccgccacc 410
               ||||||||||||||||||||
Sbjct: 2170911 caacagcctccaccgccacc 2170892

>emb|CT025661.8| Mouse DNA sequence from clone RP23-357H5 on chromosome 9, complete
             sequence
          Length = 219201

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   ctccagggagggctactacc 498
             ||||||||||||||||||||
Sbjct: 51351 ctccagggagggctactacc 51332

>gb|AC140287.3| Mus musculus BAC clone RP23-346L16 from 6, complete sequence
          Length = 213473

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    gccattctcttctcttcttcccac 40
             ||||||| ||||||||||||||||
Sbjct: 22669 gccattcccttctcttcttcccac 22692


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,046,343
Number of Sequences: 3902068
Number of extensions: 3046343
Number of successful extensions: 159864
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159191
Number of HSP's gapped (non-prelim): 673
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)