>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
 Frame = +2

Query: 188 SSPSPCAPFSRRARPPRGRMLPTRQTSSASARPATT--------CSATPTLMKMHC 331
           ++P P  P    A PP G++ P    ++A   PA T        C+  P L  MHC
Sbjct: 302 AAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHC 357

>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
 Frame = +2

Query: 188 SSPSPCAPFSRRARPPRGRMLPTRQTSSASARPATT--------CSATPTLMKMHC 331
           ++P P  P    A PP G++ P    ++A   PA T        C+  P L  MHC
Sbjct: 303 AAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHC 358

>SPRR4_HUMAN (Q96PI1) Small proline-rich protein 4|
          Length = 79

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 179 CVPSSPSPCAPFSRRARPPRGRMLPTRQ 262
           C P +  PCAP  ++  PP+G ++P +Q
Sbjct: 38  CAPKTKDPCAPQVKKQCPPKGTIIPAQQ 65

>DEOD_TREPA (O83716) Purine nucleoside phosphorylase deoD-type (EC 2.4.2.1)|
           (PNP)
          Length = 233

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -1

Query: 387 GTNFGLPSQ----LHVFWTLGTQQCIFIKVGVAEHVVAGLALAELVCRVGSILPRGGRAR 220
           GT  GLPS       +F   G Q+ I  +VG A  +   +AL  +VC +G+       AR
Sbjct: 61  GTGMGLPSHSIYVTELFQDYGVQKAI--RVGTAGGLQEEVALKSVVCALGAATDSAINAR 118

Query: 219 REKGAH 202
           R  G H
Sbjct: 119 RFSGMH 124

>HLYS_HYDAT (Q52SK7) Hydralysin|
          Length = 243

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 441 FQLSITVDISNQWTRINAGTNFGLPSQLHVFWTLGTQQCIFIKVGVAEHVVAGLALAELV 262
           F++ ITVD S        G NFG   Q H FW + T Q +    G+ +  +   ++ ++ 
Sbjct: 182 FEVPITVDGS-------FGANFGSSVQGHYFWFMSTDQALSKTSGIIKGTIDHASVFDVS 234

Query: 261 CRVGSILP 238
             +G   P
Sbjct: 235 TEIGPSEP 242

>RDRP_NODAV (Q9IMM4) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA|
           replicase) (Protein A)
          Length = 1043

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +1

Query: 346 PKHVELRWQTEVSSSIYASPLIADIN 423
           P HVE+  + EVS+ +YASPL++D N
Sbjct: 408 PAHVEVD-EAEVSARVYASPLVSDEN 432

>RGS9_HUMAN (O75916) Regulator of G-protein signaling 9 (RGS9)|
          Length = 674

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +2

Query: 179 CVPSSPSPCAPFSRRARPPRGRMLPTRQTSSASARPATTCSATP 310
           C+P  PSP +PFS   R PR    P    S    RP+TT   +P
Sbjct: 487 CMP--PSPSSPFSSSCRSPR---KPFASPSRFIRRPSTTICPSP 525

>HXB4A_BRARE (P22574) Homeobox protein Hox-B4a (Hox-B4) (Zf-13)|
          Length = 246

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 233 PRGRMLPTRQTSSASARPATTC-SATPTLMKMHC*VPSVQNTWS*DGR--PKLVPAFMRV 403
           PRG +LPT   S+    P+  C S TP+        P+ QNT +   R  P + P   +V
Sbjct: 78  PRGHVLPTTALSTPLPEPSHHCDSVTPSPPPACGQTPTSQNTSTVSSRKDPVVYPWMKKV 137

Query: 404 H*LLIS 421
           H  ++S
Sbjct: 138 HVNIVS 143

>PERO_DROME (Q01603) Peroxidase precursor (EC 1.11.1.7) (DmPO)|
          Length = 690

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +2

Query: 182 VPSSPSPCAPFSRRARPP---RGRMLPTRQTSSASARPATTCSAT 307
           +P+SP+P  PFS  A PP    G   PT    S +A PA  C  T
Sbjct: 60  LPTSPAPQNPFSSPASPPVSAYGYSFPTAGRVSCAAPPA-VCEKT 103

>ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 protein homolog)|
          Length = 867

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +2

Query: 182 VPSSPSPCAPFSRRARPPRGRMLPTRQTSSASARPATTCSATPTLMKMHC*VPS 343
           +P  P   +P S R  P R   +PT Q    S   ATT SA P L+   C  P+
Sbjct: 542 IPPVPCTTSPVSARV-PHRTNSVPTSQ-GGISYLAATTVSAPPVLLSSTCISPN 593

>JIP2_MOUSE (Q9ERE9) C-jun-amino-terminal kinase-interacting protein 2|
           (JNK-interacting protein 2) (JIP-2) (JNK MAP kinase
           scaffold protein 2) (Islet-brain-2) (IB-2)
           (Mitogen-activated protein kinase 8-interacting protein
           2)
          Length = 830

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 185 PSSPSPCAPFSRRARPPRGRMLPTRQTSSASARPATTCSA 304
           P+ P PC   S    P R  + P   T   +ARP  +CSA
Sbjct: 432 PAQPGPCLFLSN---PTRDTITPLWATPGRTARPGRSCSA 468

>VG28_ICHV1 (Q00131) Hypothetical gene 28 protein|
          Length = 590

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 185 PSSPSPCA-PFSRRARPPRGRMLPTRQTSSASARPATTCSATPTLMKM 325
           PS P P   P + +  PP G   PT + S    +P  +  A  TLM +
Sbjct: 543 PSLPQPVPEPLAPQEPPPPGTSAPTLEASLPQQKPVVSKGAFETLMNL 590

>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2|
          Length = 902

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 185 PSSPSPCAPFSRRARPPRGRMLPTRQTSSASARPATTCSATP 310
           P++ +P AP  R   P       T +  + +ARPATT +  P
Sbjct: 184 PATAAPAAPAPRPGAPAARPGTTTTRPGTTTARPATTTAQRP 225

>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1006

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/63 (31%), Positives = 24/63 (38%)
 Frame = +2

Query: 179 CVPSSPSPCAPFSRRARPPRGRMLPTRQTSSASARPATTCSATPTLMKMHC*VPSVQNTW 358
           CVP +P    P         GR L     +  +  P TT S+T TL        S Q TW
Sbjct: 361 CVPPAPDMALPRLGTQSTGPGRCLSPNLQAQEAPAPVTTSSSTSTLSSSPW---SAQPTW 417

Query: 359 S*D 367
             D
Sbjct: 418 KSD 420

>HLYS3_CHLVR (Q52SK6) Hydralysin-3|
          Length = 217

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = -1

Query: 444 YFQLSITVDISNQWTRINAGTNFGLPSQLHVFWTLGTQQCIFIKVGVAEHVVAGLALAEL 265
           +F++ +TVD S        G NF    Q H FW +  + C+    GV +  +    + ++
Sbjct: 155 FFEVPVTVDGS-------FGANFSSTVQGHYFWFMDARSCLNKTSGVIKGTIDHANVFDV 207

Query: 264 VCRVGSILP 238
              VG   P
Sbjct: 208 SVEVGPSEP 216

>YD52_SCHPO (Q10307) Hypothetical protein C6C3.02c in chromosome I|
          Length = 172

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 209 PFSRRARPPRGRMLPTRQTSSASARPATTCSATP 310
           P  R A PP  R  P R  S+A+A P  T +  P
Sbjct: 2   PRRRSAAPPPRRAAPARSASTAAALPPRTMAPPP 35

>SPRR4_MOUSE (Q8CGN8) Small proline-rich protein 4|
          Length = 76

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 179 CVPSSPSPCAPFSRRARPPRGRMLPTRQTSSASARP 286
           CVP +  PC P +++  P R    P ++   A   P
Sbjct: 36  CVPKTKDPCVPQAKKQCPARSTTNPAQEKCPAQQDP 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.130    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,284,506
Number of Sequences: 219361
Number of extensions: 830651
Number of successful extensions: 2933
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2927
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)