>TRM1_ARATH (Q9LFU5) Probable N(2),N(2)-dimethylguanosine tRNA|
           methyltransferase (EC 2.1.1.32)
           (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
           2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 586

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
 Frame = +1

Query: 271 VREGQAEIFADKSNSVFFNKAQVNNRDLSIAVLRWFISXRREEHDIQLKGR---HAEIPQ 441
           ++EG+AE+   K N VFFNKAQVNNRD+SIAVLR FI  R++EH+  L  R     ++ +
Sbjct: 11  IKEGEAEVLMHKKNQVFFNKAQVNNRDMSIAVLRAFIIKRKQEHEAMLSKRARSSGKVVE 70

Query: 442 EQHAEYHRSSMPM---D*TGSTGSE 507
           +  +E  +   P    D  G T  E
Sbjct: 71  KDVSETSKEETPTENGDDNGKTNGE 95

>TRM2_ARATH (Q9SRU7) Probable N(2),N(2)-dimethylguanosine tRNA|
           methyltransferase (EC 2.1.1.32)
           (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
           2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 599

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 31/51 (60%), Positives = 40/51 (78%)
 Frame = +1

Query: 271 VREGQAEIFADKSNSVFFNKAQVNNRDLSIAVLRWFISXRREEHDIQLKGR 423
           ++EG+AEI   K N VFFNKAQVNNRD+SIAVLR F+S R++EH+ +   R
Sbjct: 11  IKEGEAEILMHKKNQVFFNKAQVNNRDMSIAVLREFLSKRKQEHEAKSSKR 61

>TRM1_MOUSE (Q3TX08) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC|
           2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase)
           (tRNA 2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 663

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = +1

Query: 268 TVREGQAEIFADKSNSVFFNKAQVNNRDLSIAVLRWFISXRREEHDIQLKGRHAEIPQEQ 447
           TV EG A+I    +N VF+N  Q  NRDL+ AV+  F         IQ+K     +P E+
Sbjct: 57  TVTEGAAKIVFPSANEVFYNPVQEFNRDLTCAVITEFARIHLGAKGIQIK-----VPGEK 111

Query: 448 HAE 456
            +E
Sbjct: 112 DSE 114

>TRM1_HUMAN (Q9NXH9) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC|
           2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase)
           (tRNA 2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 659

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 21/50 (42%), Positives = 28/50 (56%)
 Frame = +1

Query: 268 TVREGQAEIFADKSNSVFFNKAQVNNRDLSIAVLRWFISXRREEHDIQLK 417
           TV EG A+I    +N VF+N  Q  NRDL+ AV+  F   +     IQ+K
Sbjct: 56  TVTEGAAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQIK 105

>TRM1_SCHPO (Q9P804) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC|
           2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase)
           (tRNA 2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 548

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
 Frame = +1

Query: 250 TGASPETVREGQAEIFADKSNSVFFNKAQVNNRDLSIAVLRWFISXR------REEHDIQ 411
           +GAS  ++ EG A I     N VF+N  Q  NRDLS+  +R +   R      +  H  Q
Sbjct: 26  SGASA-SLTEGSAIIPFSNPNEVFYNPVQQFNRDLSVTAIRAWSETRSKKIVAKSHHRHQ 84

Query: 412 LKGRHAEIPQE 444
           L  +++E+ QE
Sbjct: 85  LLDQNSELSQE 95

>TRM1_YEAST (P15565) N(2),N(2)-dimethylguanosine tRNA methyltransferase,|
           mitochondrial precursor (EC 2.1.1.32)
           (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
           2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 570

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 18/43 (41%), Positives = 27/43 (62%)
 Frame = +1

Query: 271 VREGQAEIFADKSNSVFFNKAQVNNRDLSIAVLRWFISXRREE 399
           V+EG+AEI   K  +VF+N  Q  NRDLS+  ++ + +   EE
Sbjct: 45  VKEGKAEILFPKKETVFYNPIQQFNRDLSVTCIKAWDNLYGEE 87

>TRM1_CAEEL (Q23270) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC|
           2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase)
           (tRNA 2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 526

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +1

Query: 271 VREGQAEIFADKSNSVFFNKAQVNNRDLSIAVLRWFISXRRE--EHDIQLK 417
           ++EGQA++       VF+N  Q  NRDL++ VLR F +  ++  E   QLK
Sbjct: 24  IQEGQAKV--GFHGPVFYNPVQEFNRDLTVTVLRQFSADHQKWAEEQKQLK 72

>TRM1_DROME (Q9VK89) Probable N(2),N(2)-dimethylguanosine tRNA|
           methyltransferase (EC 2.1.1.32)
           (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
           2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 578

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 271 VREGQAEIFADKSNSVFFNKAQVNNRDLSIAVLRWFIS-XRREEHDIQLKGRHAEIPQEQ 447
           +RE  AEI +    +VF+N  Q  NRDLSIA L  +     +E  +  LK +  ++ +++
Sbjct: 20  IRERNAEIVS--GGNVFYNPVQEFNRDLSIAALNVYRQRLTKERSEKALKKQRKKVKEQE 77

>VCO7_ADEM1 (O10440) Major core protein precursor (Protein VII) (pVII)|
          Length = 199

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 137 RKREKPHAMVIESPEDAAWGGRSRDGERSEAAVDLGAPE 21
           RKR   H + + S   AAWG R+R    + AA D  AP+
Sbjct: 25  RKRSAEHPVHVRSYWRAAWGSRNRRRVATVAAEDAEAPQ 63

>APX7_ORYSA (Q7XJ02) Probable L-ascorbate peroxidase 7, chloroplast precursor|
           (EC 1.11.1.11)
          Length = 359

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 31  PRSTAASDRSPSRLLPPHAASSGDSMTIAC 120
           PR++A    +PSRLLP  A ++G   ++ C
Sbjct: 43  PRASATLRAAPSRLLPQEAKAAGSGRSVMC 72

>CD72_MOUSE (P21855) B-cell differentiation antigen CD72 (Lyb-2) (Antigen|
           Ly-32)
          Length = 354

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 443 SCGISACLPFNWISCSSRLFEINHLKTAMERS 348
           SC    C P  WI    R F I+H   ++E S
Sbjct: 225 SCSSDTCCPCGWIPYQERCFYISHTLRSLEES 256

>PARG_BOVIN (O02776) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)|
          Length = 977

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 334 EPC*KRPNWTCPQISPPA 281
           EPC KRP W     SPPA
Sbjct: 8   EPCTKRPRWDAAATSPPA 25

>TRM1_METMP (Q9HH73) N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC|
           2.1.1.32) (tRNA(guanine-26,N(2)-N(2)) methyltransferase)
           (tRNA 2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 373

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
 Frame = +1

Query: 271 VREGQAEIFA------DKSNSVFFNKAQVNNRDLSIAVLRWFI-SXRREE 399
           + EG+ ++         K ++VF+N     NRD+S++V++ F+   +R+E
Sbjct: 4   ISEGETKLMVPEESTLSKKDTVFYNPVMETNRDISVSVVQSFLDDFKRDE 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,731,229
Number of Sequences: 219361
Number of extensions: 1093079
Number of successful extensions: 3352
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3352
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)