>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 34.3 bits (77), Expect = 0.086
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 38  PNPARRRERGRNHSPRPPPAESLAARPHVFIPRLGRRCAERERSGGAELSLA 193
           P+ +R R R R+ SP P PA     RP    P +G +  + E + G E   A
Sbjct: 503 PSQSRSRSRSRSQSPSPSPAREKLTRP-AASPAVGEKLKKTEPAAGKETGAA 553

>CWC22_CRYNE (Q5KFX4) Pre-mRNA-splicing factor CWC22|
          Length = 831

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +2

Query: 14  ANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHVFIPRLGRRCAERERS 169
           +++P+   P P RRR    + SP PPP    +       P   RR A+  RS
Sbjct: 740 SDEPRSPSPPPRRRRYSDDSRSPSPPPRRRYSGDSRSPSPPPRRRYADDSRS 791

>OLIG1_MOUSE (Q9JKN5) Oligodendrocyte transcription factor 1 (Oligo1)|
           (Oligodendrocyte-specific bHLH transcription factor 1)
          Length = 260

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +2

Query: 11  SANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHV----FIPRLGRRCAERERSGGA 178
           S++    LLP PAR +       PR P  ES  AR          +L R+   RER    
Sbjct: 49  SSSSTASLLPKPAREKAEAPLAEPRGPAPESGGARADAKEEQQQQQLRRKINSRERKRMQ 108

Query: 179 ELSLAV 196
           +L+LA+
Sbjct: 109 DLNLAM 114

>OLIG1_RAT (Q9WUQ3) Oligodendrocyte transcription factor 1 (Oligo1) (Olg-1|
           bHLH protein)
          Length = 261

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +2

Query: 11  SANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHV----FIPRLGRRCAERERSGGA 178
           S++    LLP PAR +       PR P  ES  AR          +L R+   RER    
Sbjct: 50  SSSSTASLLPKPAREKPEAPLAEPRGPAPESGGARADAKEEQQQQQLRRKINSRERKRMQ 109

Query: 179 ELSLAV 196
           +L+LA+
Sbjct: 110 DLNLAM 115

>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 367

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = +2

Query: 86  PPPAESLAA----RPHVFIPRLGRRCAERERSGGAELSLAVAQ 202
           PPP  SL A    +    +  + RRC   ER GG    LA AQ
Sbjct: 136 PPPGSSLRAVAVYKKSEHVAEVVRRCPHHERCGGGTDGLAPAQ 178

>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 732

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 56  RERGRNHSPRPPPAESLAARPHVFIPRLGRRCAERERSGGAE 181
           +E      P   PA  L  RP   +P+L  R A ++R+G  E
Sbjct: 321 KEASLQEPPGKQPAAGLPGRPVSRVPQLKARVASKDRTGNDE 362

>RELN_HUMAN (P78509) Reelin precursor (EC 3.4.21.-)|
          Length = 3460

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 178 SPATPFPLRASPSQSRNKNVWA 113
           +PAT F LR    Q  N+NVWA
Sbjct: 533 TPATKFCLRQKNHQGHNRNVWA 554

>TRIP6_HUMAN (Q15654) Thyroid receptor-interacting protein 6 (TRIP6)|
           (OPA-interacting protein 1) (Zyxin-related protein 1)
           (ZRP-1)
          Length = 476

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = +2

Query: 5   WISANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHV---FIPRLGRRCAERERSGG 175
           W+   QP+       R   RG   +P PPPA   A +PH    F P    +C   +  GG
Sbjct: 6   WLPPKQPEPARAPQGRAIPRG---TPGPPPAHGAALQPHPRVNFCPLPSEQC--YQAPGG 60

Query: 176 AE 181
            E
Sbjct: 61  PE 62

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = +2

Query: 23   PQFLLPN-PAR---RRERGRNHSPRPPPAESLAARPH-VFIPRLGRRCAERERSG 172
            P+  LP  PAR   R  RG   SP PPP   LA R H    PR G   +   R G
Sbjct: 2349 PRARLPQKPARSVQRERRGLVLSPPPPPPGELAPRAHPARTPRPGPGDSRSRRGG 2403

>IER2_RAT (Q6P7D3) Immediate early response gene 2 protein|
          Length = 221

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +2

Query: 8   ISANQPQFLLPNPARRRERGRNHSPRPPPAESLAARPHVFIP 133
           +  +QP+F    P+RR    R H PR P A   AA P V  P
Sbjct: 52  VETHQPEF---PPSRRALDPRLHPPREPEAAMEAATPDVEQP 90

>RELN_MOUSE (Q60841) Reelin precursor (EC 3.4.21.-) (Reeler protein)|
          Length = 3461

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 178 SPATPFPLRASPSQSRNKNVWA 113
           +PAT F LR    Q  N+NVWA
Sbjct: 534 TPATKFCLRQKSHQGYNRNVWA 555

>RELN_RAT (P58751) Reelin precursor (EC 3.4.21.-)|
          Length = 3462

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 178 SPATPFPLRASPSQSRNKNVWA 113
           +PAT F LR    Q  N+NVWA
Sbjct: 535 TPATKFCLRQKNHQGHNQNVWA 556

>TFDB_COMAC (Q8KN28) 2,4-dichlorophenol 6-monooxygenase (EC 1.14.13.20)|
           (2,4-dichlorophenol hydroxylase) (2,4-DCP hydroxylase)
          Length = 586

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 38  PNPARRRERGRNHSPRPPPAESLAARPHVFIPRLGRRCAERERSGGAELSL 190
           P+P  RR+    H+    P    A  PHV++ R GRR +  +  G    SL
Sbjct: 451 PDPGFRRDSELYHAHSGRPG---APVPHVWVTRHGRRVSTLDLCGKGRFSL 498

>RELN_CHICK (O93574) Reelin (EC 3.4.21.-) (Fragment)|
          Length = 3209

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 178 SPATPFPLRASPSQSRNKNVWA 113
           +PAT F L+    Q  N+NVWA
Sbjct: 281 TPATKFCLKQKSHQGHNRNVWA 302

>ZN759_HUMAN (Q8NAF0) Zinc finger protein 579|
          Length = 562

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 44  PARRRERGRNHSPRPPPAESLAARPHVF-IPRLGRRCAERERSGGAELSLAVAQVDSRT 217
           PA      R H P+PP     AA P  F  P   RR   +E +GG E+ LA+ +V   T
Sbjct: 84  PAHLSRHLRGHGPQPP--LRCAACPRTFPEPAQLRRHLAQEHAGG-EVELAIERVAKET 139

>LCP2_HUMAN (Q13094) Lymphocyte cytosolic protein 2 (SH2 domain-containing|
           leucocyte protein of 76 kDa) (SLP-76 tyrosine
           phosphoprotein) (SLP76)
          Length = 533

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 8   ISANQPQFLLPNPARRRERGRNHSPRPPP 94
           +   +P   LP P      GRNHSP PPP
Sbjct: 188 VPPQRPMAALPPPPA----GRNHSPLPPP 212

>GCS1_SCHPO (O14255) Probable mannosyl-oligosaccharide glucosidase (EC|
           3.2.1.106) (Processing A-glucosidase I)
          Length = 808

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 160 GKEWRG*ALAGCGASGFTDRCRRPPPLVANL 252
           G  WRG     C ASG  D  R  PP  A L
Sbjct: 563 GYRWRGRTYQHCLASGLDDYPRAQPPSTAEL 593

>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1006

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 35  LPNPARRRERGRNHSPRPPPAESLAARPHVFIPRLG 142
           LP P R   R  +HSP   P   +   P + +PRLG
Sbjct: 341 LPKPPRSPSRSPSHSPNRSPC--VPPAPDMALPRLG 374


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,658,169
Number of Sequences: 219361
Number of extensions: 603402
Number of successful extensions: 2100
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2085
length of database: 80,573,946
effective HSP length: 64
effective length of database: 66,534,842
effective search space used: 1596836208
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)