ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl31h12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 0.87
2ref|XM_418968.1| PREDICTED: Gallus gallus similar to 3110004L20R... 42 0.87
3gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosom... 42 0.87
4emb|AL358791.24| Human DNA sequence from clone RP11-42B19 on chr... 42 0.87
5gb|CP000249.1| Frankia sp. CcI3, complete genome 42 0.87
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.87
7gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromos... 42 0.87
8dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.87
9emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 0.87
10gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
11ref|XM_418459.1| PREDICTED: Gallus gallus similar to beta-1 synt... 40 3.5
12ref|XM_416667.1| PREDICTED: Gallus gallus similar to lysophospha... 40 3.5
13gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom... 40 3.5
14gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
15gb|AC120843.11| Mus musculus chromosome 12, clone RP23-71C5, com... 40 3.5
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.5
17gb|AC160963.2| Mus musculus BAC clone RP24-311B3 from chromosome... 40 3.5
18ref|XM_534751.2| PREDICTED: Canis familiaris similar to Glutathi... 40 3.5
19ref|XM_549415.2| PREDICTED: Canis familiaris hypothetical LOC475... 40 3.5
20gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosom... 40 3.5
21gb|AC154556.2| Mus musculus BAC clone RP23-423F3 from chromosome... 40 3.5
22emb|AJ719936.1| Gallus gallus mRNA for hypothetical protein, clo... 40 3.5
23emb|X99486.1|OSRYR2 Oryctolagus sp. RYR2 gene 40 3.5
24gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 3.5
25dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 3.5
26emb|CR388361.6| Zebrafish DNA sequence from clone DKEY-87J1 in l... 40 3.5
27gb|AC154612.2| Mus musculus BAC clone RP23-338A21 from chromosom... 40 3.5
28gb|AC159202.2| Mus musculus BAC clone RP23-297L21 from chromosom... 40 3.5
29gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 3.5
30gb|AC034187.6| Homo sapiens chromosome 3 clone RP11-202A21 map 3... 40 3.5
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
33dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
36gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosom... 40 3.5
37emb|BX932300.1| Gallus gallus finished cDNA, clone ChEST353l17 40 3.5
38emb|BX932077.1| Gallus gallus finished cDNA, clone ChEST156j18 40 3.5
39ref|NM_001005798.1| Gallus gallus syntrophin, beta 1 (SNTB1), mRNA 40 3.5
40dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
41dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
42dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
43ref|NM_210719.1| Eremothecium gossypii AFL185Wp (AFL185W), mRNA 40 3.5
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
45emb|AL731746.5|CNS08C7V Oryza sativa chromosome 12, . BAC OSJNBa... 40 3.5
46emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 40 3.5
47gb|AC132615.5| Mus musculus BAC clone RP23-301J15 from 9, comple... 40 3.5 
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 216     caggtgccgccgcccgccgcc 236
               |||||||||||||||||||||
Sbjct: 2730698 caggtgccgccgcccgccgcc 2730718
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>ref|XM_418968.1| PREDICTED: Gallus gallus similar to 3110004L20Rik protein
            (LOC420881), mRNA
          Length = 7004

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 218  ggtgccgccgcccgccgccgc 238
            |||||||||||||||||||||
Sbjct: 2574 ggtgccgccgcccgccgccgc 2594
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>gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosome 7, complete sequence
          Length = 152811

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     caaccaaccacagtttcttct 36
              |||||||||||||||||||||
Sbjct: 109420 caaccaaccacagtttcttct 109440
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>emb|AL358791.24| Human DNA sequence from clone RP11-42B19 on chromosome 10 Contains the
             3' end of a novel gene, complete sequence
          Length = 197389

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    caaccaaccacagtttcttct 36
             |||||||||||||||||||||
Sbjct: 28165 caaccaaccacagtttcttct 28185
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    ggtgccgccgcccgccgccgc 238
              |||||||||||||||||||||
Sbjct: 957855 ggtgccgccgcccgccgccgc 957875
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 221      gccgccgcccgccgccgctag 241
                |||||||||||||||||||||
Sbjct: 16957939 gccgccgcccgccgccgctag 16957919
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>gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromosome ul, complete
              sequence
          Length = 197416

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     gagggggaggaatcattcccc 81
              |||||||||||||||||||||
Sbjct: 195678 gagggggaggaatcattcccc 195658
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>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0488D02
          Length = 154537

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   gccgccgcccgccgccgctag 241
             |||||||||||||||||||||
Sbjct: 87752 gccgccgcccgccgccgctag 87732
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     aggtgccgccgcccgccgccg 237
               |||||||||||||||||||||
Sbjct: 3385003 aggtgccgccgcccgccgccg 3385023
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>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04,
             complete sequence
          Length = 88553

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   tgccgccgcccgccgccgct 239
             ||||||||||||||||||||
Sbjct: 70790 tgccgccgcccgccgccgct 70809
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>ref|XM_418459.1| PREDICTED: Gallus gallus similar to beta-1 syntrophin (LOC420353),
           mRNA
          Length = 3053

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 gccgccgcccgccgccgcta 240
           ||||||||||||||||||||
Sbjct: 117 gccgccgcccgccgccgcta 98
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>ref|XM_416667.1| PREDICTED: Gallus gallus similar to lysophosphatidic acid
           phosphatase (LOC418458), mRNA
          Length = 2057

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 tgccgccgcccgccgccgct 239
           ||||||||||||||||||||
Sbjct: 846 tgccgccgcccgccgccgct 827
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>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
             sequence
          Length = 190055

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ggagagagagggggaggaat 73
             ||||||||||||||||||||
Sbjct: 42427 ggagagagagggggaggaat 42446
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>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009E21, complete sequence
          Length = 153214

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   tgccgccgcccgccgccgct 239
             ||||||||||||||||||||
Sbjct: 13451 tgccgccgcccgccgccgct 13470
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>gb|AC120843.11| Mus musculus chromosome 12, clone RP23-71C5, complete sequence
          Length = 220627

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     gacggagagagagggggagg 70
              ||||||||||||||||||||
Sbjct: 117169 gacggagagagagggggagg 117150
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 54       ggagagagagggggaggaat 73
                ||||||||||||||||||||
Sbjct: 21349516 ggagagagagggggaggaat 21349535
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>gb|AC160963.2| Mus musculus BAC clone RP24-311B3 from chromosome 12, complete sequence
          Length = 155386

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     aaccacagtttcttctccct 40
              ||||||||||||||||||||
Sbjct: 105059 aaccacagtttcttctccct 105040
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>ref|XM_534751.2| PREDICTED: Canis familiaris similar to Glutathione S-transferase
           theta 1 (GST class-theta 1) (Glutathione transferase
           T1-1) (LOC477556), mRNA
          Length = 1169

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  tccccgcggccgccccccgc 96
           ||||||||||||||||||||
Sbjct: 143 tccccgcggccgccccccgc 162
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>ref|XM_549415.2| PREDICTED: Canis familiaris hypothetical LOC475030 (LOC475030),
           mRNA
          Length = 752

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 gtgccgccgcccgccgccgc 238
           ||||||||||||||||||||
Sbjct: 140 gtgccgccgcccgccgccgc 121
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>gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosome 15, complete
             sequence
          Length = 165103

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ggagagagagggggaggaat 73
             ||||||||||||||||||||
Sbjct: 42490 ggagagagagggggaggaat 42471
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>gb|AC154556.2| Mus musculus BAC clone RP23-423F3 from chromosome 14, complete sequence
          Length = 189092

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    aaccaaccacagtttcttctccct 40
             |||||||||||||||| |||||||
Sbjct: 35491 aaccaaccacagtttcctctccct 35468
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>emb|AJ719936.1| Gallus gallus mRNA for hypothetical protein, clone 8j5
          Length = 4026

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 gccgccgcccgccgccgcta 240
           ||||||||||||||||||||
Sbjct: 77  gccgccgcccgccgccgcta 58
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>emb|X99486.1|OSRYR2 Oryctolagus sp. RYR2 gene
          Length = 3819

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 54   ggagagagagggggaggaatcattcccc 81
            |||||||||||| ||| |||||||||||
Sbjct: 1104 ggagagagagggagagaaatcattcccc 1131
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    gtgccgccgcccgccgccgc 238
              ||||||||||||||||||||
Sbjct: 783626 gtgccgccgcccgccgccgc 783607
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 219     gtgccgccgcccgccgccgc 238
               ||||||||||||||||||||
Sbjct: 4083364 gtgccgccgcccgccgccgc 4083383
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>emb|CR388361.6| Zebrafish DNA sequence from clone DKEY-87J1 in linkage group 22,
             complete sequence
          Length = 64922

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   caggtgccgccgcccgccgc 235
             ||||||||||||||||||||
Sbjct: 50667 caggtgccgccgcccgccgc 50648
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>gb|AC154612.2| Mus musculus BAC clone RP23-338A21 from chromosome 14, complete
             sequence
          Length = 197282

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    aaccaaccacagtttcttctccct 40
             |||||||||||||||| |||||||
Sbjct: 64872 aaccaaccacagtttcctctccct 64895
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>gb|AC159202.2| Mus musculus BAC clone RP23-297L21 from chromosome 12, complete sequence
          Length = 210589

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     gacggagagagagggggagg 70
              ||||||||||||||||||||
Sbjct: 188631 gacggagagagagggggagg 188650
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
             complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gccaaccaaccacagtttct 33
             ||||||||||||||||||||
Sbjct: 94711 gccaaccaaccacagtttct 94692
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>gb|AC034187.6| Homo sapiens chromosome 3 clone RP11-202A21 map 3p, complete sequence
          Length = 171716

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    aagcgccaaccaaccacagtttct 33
             |||| |||||||||||||||||||
Sbjct: 84641 aagccccaaccaaccacagtttct 84618
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 220      tgccgccgcccgccgccgct 239
                ||||||||||||||||||||
Sbjct: 19022512 tgccgccgcccgccgccgct 19022531
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tgccgccgcccgccgccgct 239
              ||||||||||||||||||||
Sbjct: 671105 tgccgccgcccgccgccgct 671124
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 220      tgccgccgcccgccgccgct 239
                ||||||||||||||||||||
Sbjct: 22658252 tgccgccgcccgccgccgct 22658271
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 54       ggagagagagggggaggaat 73
                ||||||||||||||||||||
Sbjct: 21342545 ggagagagagggggaggaat 21342564
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     tgccgccgcccgccgccgct 239
               ||||||||||||||||||||
Sbjct: 2780465 tgccgccgcccgccgccgct 2780484
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>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete
             sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ggagagagagggggaggaat 73
             ||||||||||||||||||||
Sbjct: 12555 ggagagagagggggaggaat 12574
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>emb|BX932300.1| Gallus gallus finished cDNA, clone ChEST353l17
          Length = 1003

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 tgccgccgcccgccgccgct 239
           ||||||||||||||||||||
Sbjct: 81  tgccgccgcccgccgccgct 62
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>emb|BX932077.1| Gallus gallus finished cDNA, clone ChEST156j18
          Length = 1297

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 tgccgccgcccgccgccgct 239
           ||||||||||||||||||||
Sbjct: 88  tgccgccgcccgccgccgct 69
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>ref|NM_001005798.1| Gallus gallus syntrophin, beta 1 (SNTB1), mRNA
          Length = 4026

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 gccgccgcccgccgccgcta 240
           ||||||||||||||||||||
Sbjct: 77  gccgccgcccgccgccgcta 58
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>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1118_G09
          Length = 115815

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  tgccgccgcccgccgccgct 239
            ||||||||||||||||||||
Sbjct: 9636 tgccgccgcccgccgccgct 9655
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>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1123_C12
          Length = 114309

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tgccgccgcccgccgccgct 239
              ||||||||||||||||||||
Sbjct: 105607 tgccgccgcccgccgccgct 105626
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0050G13
          Length = 150685

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   tgccgccgcccgccgccgct 239
             ||||||||||||||||||||
Sbjct: 48693 tgccgccgcccgccgccgct 48712
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>ref|NM_210719.1| Eremothecium gossypii AFL185Wp (AFL185W), mRNA
          Length = 2877

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gccaaccaaccacagtttct 33
            ||||||||||||||||||||
Sbjct: 1187 gccaaccaaccacagtttct 1168
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 220      tgccgccgcccgccgccgct 239
                ||||||||||||||||||||
Sbjct: 18948739 tgccgccgcccgccgccgct 18948758
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>emb|AL731746.5|CNS08C7V Oryza sativa chromosome 12, . BAC OSJNBa0039K19 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104289

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   tgccgccgcccgccgccgct 239
             ||||||||||||||||||||
Sbjct: 26043 tgccgccgcccgccgccgct 26062
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>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tgccgccgcccgccgccgct 239
              ||||||||||||||||||||
Sbjct: 118604 tgccgccgcccgccgccgct 118623
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>gb|AC132615.5| Mus musculus BAC clone RP23-301J15 from 9, complete sequence
          Length = 201718

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ccaaccacagtttcttctcc 38
             ||||||||||||||||||||
Sbjct: 12983 ccaaccacagtttcttctcc 13002


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,198,437
Number of Sequences: 3902068
Number of extensions: 2198437
Number of successful extensions: 64341
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63329
Number of HSP's gapped (non-prelim): 1012
length of query: 266
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 244
effective length of database: 17,147,199,772
effective search space: 4183916744368
effective search space used: 4183916744368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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