ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl31h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DIPA_HUMAN (Q15834) Delta-interacting protein A (Hepatitis delta... 33 0.26
2DIPA_MOUSE (Q6PDY0) Delta-interacting protein A homolog (Coiled-... 32 0.35
3TEGU_EBV (P03186) Large tegument protein 32 0.59
4EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear a... 31 0.77
5DNAK_THERO (P96133) Chaperone protein dnaK (Heat shock protein 7... 29 3.8
6TEAD4_CHICK (P48984) Transcriptional enhancer factor TEF-3 (TEA ... 28 5.0
7SLT11_ASPFU (Q4W9V0) Pre-mRNA-splicing factor slt11 28 6.5
8ARP4_EMENI (Q5AW89) Actin-like protein arp4 28 6.5

>DIPA_HUMAN (Q15834) Delta-interacting protein A (Hepatitis delta|
           antigen-interacting protein A) (Coiled-coil
           domain-containing protein 85B)
          Length = 202

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 29  KSNLPTSAL-LAVGIDWLGRGEGDVAXGSPSRPFPSLALPPRMP 157
           + NL    L LA+G +W  RG    A GS + P P LALPP  P
Sbjct: 132 RENLALKELCLALGEEWGPRGGPSGAGGSGAGPAPELALPPCGP 175



to top

>DIPA_MOUSE (Q6PDY0) Delta-interacting protein A homolog (Coiled-coil|
           domain-containing protein 85B)
          Length = 202

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 29  KSNLPTSAL-LAVGIDWLGRGEGDVAXGSPSRPFPSLALPPRMP 157
           + NL    L LA+G +W  RG    A GS + P P LALPP  P
Sbjct: 132 RENLALKELCLALGEEWGPRGGPGGAVGSGAGPTPELALPPCGP 175



to top

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +2

Query: 38   LPTSALLAVGIDWLGRGEGDVAXGS-----PSRPFPSLALPPRMPLPSRRK 175
            LPT  + AVG   + +  G +A G+     P+   PS A PPR+ LP R +
Sbjct: 2910 LPTPTIKAVGARPVPKATGALAAGARPRGQPTAAPPSAASPPRVSLPVRSR 2960



to top

>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)|
           (EBNA-1)
          Length = 641

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +2

Query: 80  GRGEGDVAXGSPSRPFPSLALPPRMPLPSRRKV*H 184
           GRG G+    SPS    S   PPR P P RR   H
Sbjct: 373 GRGRGEKRPRSPSSQSSSSGSPPRRPPPGRRPFFH 407



to top

>DNAK_THERO (P96133) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 631

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 35  NLPTSALLAVGIDWLGRGEGDV 100
           N PT++ LA G+D  GRGEG V
Sbjct: 169 NEPTASALAYGLDKKGRGEGGV 190



to top

>TEAD4_CHICK (P48984) Transcriptional enhancer factor TEF-3 (TEA domain family|
           member 4) (TEAD-4) (TEF-1) (M-CAT-binding factor)
           (RTEF-1)
          Length = 438

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
 Frame = +2

Query: 23  HSKS---NLPTSALLAVGIDWLGRGEGDVAXGSPSRPFPS--LALPPRMPLP 163
           HSK     LP SA  AV   W G   G        +PF     AL P +PLP
Sbjct: 150 HSKMALPGLPRSAYPAVSGFWQGALPGQAGSSQDVKPFTQQPYALQPSLPLP 201



to top

>SLT11_ASPFU (Q4W9V0) Pre-mRNA-splicing factor slt11|
          Length = 383

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 80  GRGEGDVAXGSPSRPFPSLALPPRMP 157
           GRG G++  G   RPFP  A  P  P
Sbjct: 205 GRGRGNMRGGRAGRPFPGTAQIPPSP 230



to top

>ARP4_EMENI (Q5AW89) Actin-like protein arp4|
          Length = 472

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -2

Query: 111 DPXATSPSPLPSQSIPTARRAEVGRLDLEWR 19
           DP +  P+P P+Q+IP   +A +  +D++ R
Sbjct: 355 DPDSQFPAPTPAQTIPELIKAALNGVDVDLR 385


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,293,717
Number of Sequences: 219361
Number of extensions: 301268
Number of successful extensions: 1677
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top