Clone Name | bastl31h08 |
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Clone Library Name | barley_pub |
>DIPA_HUMAN (Q15834) Delta-interacting protein A (Hepatitis delta| antigen-interacting protein A) (Coiled-coil domain-containing protein 85B) Length = 202 Score = 32.7 bits (73), Expect = 0.26 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +2 Query: 29 KSNLPTSAL-LAVGIDWLGRGEGDVAXGSPSRPFPSLALPPRMP 157 + NL L LA+G +W RG A GS + P P LALPP P Sbjct: 132 RENLALKELCLALGEEWGPRGGPSGAGGSGAGPAPELALPPCGP 175
>DIPA_MOUSE (Q6PDY0) Delta-interacting protein A homolog (Coiled-coil| domain-containing protein 85B) Length = 202 Score = 32.3 bits (72), Expect = 0.35 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +2 Query: 29 KSNLPTSAL-LAVGIDWLGRGEGDVAXGSPSRPFPSLALPPRMP 157 + NL L LA+G +W RG A GS + P P LALPP P Sbjct: 132 RENLALKELCLALGEEWGPRGGPGGAVGSGAGPTPELALPPCGP 175
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 31.6 bits (70), Expect = 0.59 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Frame = +2 Query: 38 LPTSALLAVGIDWLGRGEGDVAXGS-----PSRPFPSLALPPRMPLPSRRK 175 LPT + AVG + + G +A G+ P+ PS A PPR+ LP R + Sbjct: 2910 LPTPTIKAVGARPVPKATGALAAGARPRGQPTAAPPSAASPPRVSLPVRSR 2960
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 31.2 bits (69), Expect = 0.77 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = +2 Query: 80 GRGEGDVAXGSPSRPFPSLALPPRMPLPSRRKV*H 184 GRG G+ SPS S PPR P P RR H Sbjct: 373 GRGRGEKRPRSPSSQSSSSGSPPRRPPPGRRPFFH 407
>DNAK_THERO (P96133) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 631 Score = 28.9 bits (63), Expect = 3.8 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +2 Query: 35 NLPTSALLAVGIDWLGRGEGDV 100 N PT++ LA G+D GRGEG V Sbjct: 169 NEPTASALAYGLDKKGRGEGGV 190
>TEAD4_CHICK (P48984) Transcriptional enhancer factor TEF-3 (TEA domain family| member 4) (TEAD-4) (TEF-1) (M-CAT-binding factor) (RTEF-1) Length = 438 Score = 28.5 bits (62), Expect = 5.0 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Frame = +2 Query: 23 HSKS---NLPTSALLAVGIDWLGRGEGDVAXGSPSRPFPS--LALPPRMPLP 163 HSK LP SA AV W G G +PF AL P +PLP Sbjct: 150 HSKMALPGLPRSAYPAVSGFWQGALPGQAGSSQDVKPFTQQPYALQPSLPLP 201
>SLT11_ASPFU (Q4W9V0) Pre-mRNA-splicing factor slt11| Length = 383 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 80 GRGEGDVAXGSPSRPFPSLALPPRMP 157 GRG G++ G RPFP A P P Sbjct: 205 GRGRGNMRGGRAGRPFPGTAQIPPSP 230
>ARP4_EMENI (Q5AW89) Actin-like protein arp4| Length = 472 Score = 28.1 bits (61), Expect = 6.5 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = -2 Query: 111 DPXATSPSPLPSQSIPTARRAEVGRLDLEWR 19 DP + P+P P+Q+IP +A + +D++ R Sbjct: 355 DPDSQFPAPTPAQTIPELIKAALNGVDVDLR 385 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,293,717 Number of Sequences: 219361 Number of extensions: 301268 Number of successful extensions: 1677 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1674 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)