Clone Name | bastl31h05 |
---|---|
Clone Library Name | barley_pub |
>OR1M1_HUMAN (Q8NGA1) Olfactory receptor 1M1 (Olfactory receptor 19-6) (OR19-6)| Length = 313 Score = 30.0 bits (66), Expect = 2.8 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = -2 Query: 340 ILTETVPQVVLS*QNGSRASDVPTEIIELYSTYF 239 + T T+P++++S Q GS+A P +I++Y +F Sbjct: 73 LATNTIPKMLVSLQTGSKAISYPCCLIQMYFFHF 106
>CEFE_NOCLA (Q03047) Deacetoxycephalosporin C synthetase (EC 1.14.20.1) (DAOCS)| (Expandase) Length = 314 Score = 28.9 bits (63), Expect = 6.2 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 Query: 222 QIQEDGK*VEYSSMISVGTSDALEPFCQLRTTW 320 QI GK +YS S+GT+D L P + W Sbjct: 89 QITNTGKYTDYSMSYSMGTADNLFPSAEFEKAW 121
>IF3A_SCHPO (O74760) Probable eukaryotic translation initiation factor 3 110| kDa subunit (eIF3 p110) (Translation initiation factor eIF3, p110 subunit) (eIF3a) Length = 932 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = -1 Query: 110 GAWRRGGGRDGTAEAASPLGWTRGETRVSIP 18 GAWRRGG G SP G +R S+P Sbjct: 879 GAWRRGGASAGGVSRDSPRYSRGGYSRGSVP 909
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 28.5 bits (62), Expect = 8.1 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Frame = -1 Query: 167 RARKTSLGSRGR-------RRCLNLEGAWRRGGGRDGTAEAASPLGWTRGETR 30 R + + G RGR R G RGGG GT ++P G T ETR Sbjct: 1034 RGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGSGGTNHPSAPRGRTASETR 1086
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 28.5 bits (62), Expect = 8.1 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Frame = -1 Query: 167 RARKTSLGSRGR-------RRCLNLEGAWRRGGGRDGTAEAASPLGWTRGETR 30 R + + G RGR R G RGGG GT ++P G T ETR Sbjct: 1039 RGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGSGGTNHPSAPRGRTASETR 1091 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,994,478 Number of Sequences: 219361 Number of extensions: 844403 Number of successful extensions: 1907 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1869 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1907 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)