Clone Information

BLAST Search Result

Clone Name	bastl31h04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-d...	32	0.59
2	SOX11_CHICK (P48435) Transcription factor SOX-11	32	0.78
3	IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2	32	0.78
4	DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysi...	30	1.7
5	AMEL_ORNAN (O97646) Amelogenin (Fragment)	30	1.7
6	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	30	1.7
7	BCL2_CHICK (Q00709) Apoptosis regulator Bcl-2	30	2.3
8	ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: ...	30	2.3
9	AMEL_TACAC (O97647) Amelogenin (Fragment)	30	2.9
10	HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)	30	2.9
11	SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2	30	2.9
12	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	30	2.9
13	PS1C2_PANTR (Q7YR45) Psoriasis susceptibility 1 candidate gene 2...	29	3.8
14	PS1C2_HUMAN (Q9UIG4) Psoriasis susceptibility 1 candidate gene 2...	29	3.8
15	ZMY15_HUMAN (Q9H091) Zinc finger MYND domain-containing protein 15	29	3.8
16	PRP45_CRYNE (Q5KCF5) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-pr...	29	3.8
17	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	29	3.8
18	WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interactin...	29	3.8
19	PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:...	29	5.0
20	KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.11.13)	29	5.0
21	SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor ...	29	5.0
22	BAP1_MOUSE (Q99PU7) Ubiquitin carboxyl-terminal hydrolase BAP1 (...	29	5.0
23	ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4....	29	5.0
24	SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	29	5.0
25	SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Tra...	29	5.0
26	SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Fo...	29	5.0
27	CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)	29	5.0
28	CBP1_CAEEL (P34545) Protein cbp-1	29	5.0
29	GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region ge...	29	5.0
30	SCRT1_HUMAN (Q9BWW7) Transcriptional repressor scratch 1 (Scratc...	28	6.6
31	MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated prote...	28	6.6
32	NOL6_HUMAN (Q9H6R4) Nucleolar protein 6 (Nucleolar RNA-associate...	28	6.6
33	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	28	6.6
34	RFX1_MOUSE (P48377) DNA-binding protein RFX1	28	6.6
35	FOXD1_CHICK (Q98937) Forkhead box protein D1 (Brain factor-2) (H...	28	6.6
36	WNT5_DROME (P28466) Protein Wnt-5 precursor (dWnt-5) (dWnt-3)	28	6.6
37	KCTD2_MOUSE (Q8CEZ0) Potassium channel tetramerisation domain-co...	28	6.6
38	LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent ...	28	8.6
39	EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400...	28	8.6
40	ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Frag...	28	8.6
41	APG_ARATH (P40602) Anter-specific proline-rich protein APG precu...	28	8.6
42	LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-la...	28	8.6
43	CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing pro...	28	8.6
44	ISPG_GEOSL (Q74D60) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	28	8.6
45	BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-assoc...	28	8.6
46	LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independen...	28	8.6
47	HD_RAT (P51111) Huntingtin (Huntington disease protein homolog) ...	28	8.6
48	CN044_HUMAN (Q96MY7) Protein C14orf44	28	8.6

>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
            kinase)
          Length = 1321

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +3

Query: 33   TAPQPNPFRPPARHRHVGRWPAGDRPPLPPSPQ 131
            TA    P +PP R    GR  AG RPP P SP+
Sbjct: 1202 TAADLRPKQPPGRGLGPGRAQAGARPPAPRSPR 1234

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>SOX11_CHICK (P48435) Transcription factor SOX-11|
          Length = 396

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 9/44 (20%)
 Frame = +3

Query: 27  NLTAPQPNPFRPPAR--------HRH-VGRWPAGDRPPLPPSPQ 131
           N+T   P P +PPA         H H VGR   G RPP+ P PQ
Sbjct: 282 NITKQGPPPPQPPAGLSPASVPLHLHLVGRQRGGGRPPVRPQPQ 325

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>IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2|
          Length = 883

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 19  KP*TSPHRNPIPSGRPPATATSAG 90
           +P T+  R P P+GRPPA A  AG
Sbjct: 197 RPATTTTRTPTPAGRPPAVAAEAG 220

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>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (DOT1-like protein)
          Length = 1739

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +3

Query: 39   PQPNPFRPPARHRHVGRWPAGDRPPL---PPSPQPAM 140
            P P P  PPA   H+GR PAG  PP+   PP P  A+
Sbjct: 1598 PPPPPLPPPA---HLGRSPAG--PPVLHAPPPPNAAL 1629

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>AMEL_ORNAN (O97646) Amelogenin (Fragment)|
          Length = 121

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +3

Query: 27  NLTAPQPNPFRP--PARHRHVGRWPAGDRPPLPPSPQPAM 140
           NL  P   PF+P  P +  H    P     P+PP PQP +
Sbjct: 58  NLPQPAQQPFQPQVPQQPPHQPIQPQAPAHPMPPMPQPPL 97

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>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
            chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 42   QPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
            QP P  PP  H  V +     +PP PP PQP
Sbjct: 955  QPPPPLPPPPHPSVQQQQLQPQPPPPPPPQP 985

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>BCL2_CHICK (Q00709) Apoptosis regulator Bcl-2|
          Length = 233

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/17 (70%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
 Frame = +3

Query: 90  WPAG-DRPPLPPSPQPA 137
           W AG DRPP+PP+P PA
Sbjct: 30  WAAGEDRPPVPPAPAPA 46

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>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 431

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
           P P+P   P  H    + PA   PP PP P P
Sbjct: 329 PHPHPHPHPHPHPRPPQPPAAQAPPPPPPPPP 360

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>AMEL_TACAC (O97647) Amelogenin (Fragment)|
          Length = 121

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +3

Query: 27  NLTAPQPNPFRP--PARHRHVGRWPAGDRPPLPPSPQPAM 140
           NL  P   PF+P  P +  H    P     P+PP PQP +
Sbjct: 58  NLPQPGQQPFQPQFPQKPTHRPIQPQAPVHPMPPMPQPQL 97

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>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)|
          Length = 401

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 8/40 (20%)
 Frame = +3

Query: 36  APQPNPFRPPA--------RHRHVGRWPAGDRPPLPPSPQ 131
           +PQP P  PPA         H H+   P    PP PP PQ
Sbjct: 49  SPQPAPPSPPAAPCLPPLAHHPHLPPHPPPPPPPPPPPPQ 88

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>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2|
          Length = 306

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 18  KTLNLTAPQPNPFRPPARHRHVGRWPAGDRPPLPPSPQPAMHR 146
           + L    P   P+RP  R R  G  P G +P   PSP+P   R
Sbjct: 226 RPLQRRRPGTGPWRP-GRQRGAGTAPPGTQPRQRPSPRPTPRR 267

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
           P P+P  PP+        P    PPLPPSP P
Sbjct: 127 PSPSPPAPPSPS------PPSPAPPLPPSPAP 152



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 33  TAPQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
           T P P+P  PP+        P    PP+PPSP P
Sbjct: 177 TPPSPSPPVPPSPA------PPSPAPPVPPSPAP 204

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>PS1C2_PANTR (Q7YR45) Psoriasis susceptibility 1 candidate gene 2 protein|
           homolog precursor (SPR1 protein)
          Length = 136

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRP---PLPPSPQ 131
           P+P    PP   R    WPAG +P   P PP+P+
Sbjct: 84  PEPPRTDPPQPPRPDDPWPAGPQPPENPWPPAPE 117

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>PS1C2_HUMAN (Q9UIG4) Psoriasis susceptibility 1 candidate gene 2 protein|
           precursor (SPR1 protein)
          Length = 136

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRP---PLPPSPQ 131
           P+P    PP   R    WPAG +P   P PP+P+
Sbjct: 84  PEPPRTDPPQPPRPDDPWPAGPQPPENPWPPAPE 117

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>ZMY15_HUMAN (Q9H091) Zinc finger MYND domain-containing protein 15|
          Length = 703

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 21/54 (38%)
 Frame = +3

Query: 39  PQPNPFRPPARHR---------------HVGRWPA---GDRP---PLPPSPQPA 137
           PQPNPFR P R R               H+   PA   G RP   P PPSP P+
Sbjct: 627 PQPNPFRSPFRLRAADNCMSWYCNAFIFHLVYKPAQGSGARPAPGPPPPSPTPS 680

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>PRP45_CRYNE (Q5KCF5) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing|
           protein 45)
          Length = 594

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 18  KTLNLTAPQPNPFRPPA-RHRHVGRWPAGDRPPLPPSPQPA 137
           + + +T  Q +P  PP  +H+ + R PA   PP+  SP  A
Sbjct: 209 RIIKMTEVQEDPLEPPRFKHKKIPRGPAEPPPPVLQSPPRA 249

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +3

Query: 33  TAPQPNPFRPPARHRHVGRWPAGDRPPLPPSP---QPAMHR 146
           ++P P P  PP   R +      D+PP PP P   +P+MHR
Sbjct: 231 SSPFPRPPLPPTPSRALD-----DKPPPPPPPVGNRPSMHR 266

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>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +3

Query: 33  TAPQPNPFRPPARHRHVGRWPAGDRPPLPPSP---QPAMHR 146
           ++P P P  PP   R +      D+PP PP P   +P+MHR
Sbjct: 236 SSPFPRPPLPPTPSRALD-----DKPPPPPPPVGNRPSMHR 271

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>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:|
           Proline-rich peptide SP-A (PRP-SP-A); Proline-rich
           peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)]
          Length = 676

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 12/46 (26%)
 Frame = +3

Query: 36  APQPNPFRPPARHRHVGRWPAGDRP------------PLPPSPQPA 137
           A  P P  PPA     G  P+GD+P            P PPSP PA
Sbjct: 413 ARPPPPPPPPADEPQQGPAPSGDKPKKKPPPPAGPPPPGPPSPGPA 458

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>KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.11.13)|
          Length = 1174

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +3

Query: 42  QPNPFRPPARHRHVGRWPAGDRPPLPPSPQ 131
           QP P + PA     G  PAG RPP  P PQ
Sbjct: 373 QPPPGQSPAGGPGGGPTPAGVRPPGAPQPQ 402

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>SSGP_VOLCA (P21997) Sulfated surface glycoprotein 185 precursor (SSG 185)|
          Length = 485

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
           P P P  PP       R P    PP+PP P P
Sbjct: 285 PPPPPPPPPPPSPSPPRKPPSPSPPVPPPPSP 316

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>BAP1_MOUSE (Q99PU7) Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12)|
           (BRCA1-associated protein 1) (Ubiquitin C-terminal
           hydrolase X4) (UCH-X4)
          Length = 728

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 9   DNAKTLNLTAPQPNPFRPPARHRHVGRWPAGDRPPLPPSPQPAMHRI 149
           D A+ +  + PQ     PP++ + V + P      +PP+P P + R+
Sbjct: 311 DGAEEVAGSCPQTTTHSPPSKCKLVVKPPGSSLNGVPPNPAPIVQRL 357

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>ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4.21.-)|
           (Fragment)
          Length = 232

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
           P+P P RPPA      R P    PP PP P P
Sbjct: 143 PRPLPPRPPAAQ---PRPPPSPPPPPPPPPSP 171

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>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +3

Query: 9    DNAKTLN-LTAPQPNPFRPPARHRHVGRWPAGDRPPLPP----SPQPAMHRI 149
            D+++TL     P P P  PPAR       PA  + P PP    SP PA  R+
Sbjct: 1098 DSSQTLEPKRPPPPRPVAPPAR-------PAPPQRPPPPSGARSPAPARERV 1142

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>SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Transcriptional|
           corepressor Sin3b) (Histone deacetylase complex subunit
           Sin3b)
          Length = 1162

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 39  PQPNPFR-PPARHRHVGRWPAGDRPPLPPSPQPAMHR 146
           P P P   PP      G  PA ++PPLPP   PA H+
Sbjct: 733 PAPGPHSSPPEEKGAFGDAPATEQPPLPP---PAPHK 766

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>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression|
            inhibition of growth A)
          Length = 1790

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/33 (48%), Positives = 16/33 (48%)
 Frame = +3

Query: 36   APQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
            AP P P  PPA   H G   A   PP PP P P
Sbjct: 1015 APPPPPPPPPA---HPGLSGAAPPPPPPPPPPP 1044

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>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +3

Query: 45  PNPFRPPARH-RHVGRWPAGDRPPLPPSPQPAM 140
           P     PA H  H G+   G  PPLPP P P +
Sbjct: 81  PTRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQL 113

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>CBP1_CAEEL (P34545) Protein cbp-1|
          Length = 2056

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 45  PNPFRPPARHRHVGRWPAGDRPPLPPSPQ 131
           PN   PP+  R  G  P G +PP P  PQ
Sbjct: 139 PNMMSPPSMGRVPGPSPGGPQPPGPGQPQ 167

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>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein|
          Length = 1509

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = +3

Query: 39  PQPNPF----RPPARHRHVGRWPAGDRPPLPPSPQP 134
           P P+P     RPP+R + V R P+   PPL P P P
Sbjct: 741 PSPHPTRPPSRPPSRPQSVSRPPS--EPPLHPCPPP 774

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>SCRT1_HUMAN (Q9BWW7) Transcriptional repressor scratch 1 (Scratch homolog 1|
           zinc finger protein) (Scratch 1) (SCRT) (hScrt)
          Length = 348

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 6   DDNAKTLNLTAPQPNPFRPPARHRHVGRWPAGDRPPLPPSPQPA 137
           D +A+   L  P P P    A    +G   AG  PP  P P+ A
Sbjct: 52  DGDAEAALLKGPSPEPMYAAAVRGELGPAAAGSAPPPTPRPELA 95

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>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1|
           (Transducer of regulated cAMP response element-binding
           protein 1) (Transducer of CREB protein 1)
          Length = 634

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRPPLPPSPQ 131
           PQP P  PP         PA  +PP PP PQ
Sbjct: 365 PQPQPPPPPP--------PASQQPPPPPPPQ 387

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>NOL6_HUMAN (Q9H6R4) Nucleolar protein 6 (Nucleolar RNA-associated protein)|
           (Nrap)
          Length = 1146

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
 Frame = +3

Query: 3   RDDNAKTLNL-TAPQPNPFRP----PARHRHVGRW-----PAGDRPPLPPSPQ 131
           +D+   T+ L   P P+ FRP    P ++     W     PAGD  P PP+P+
Sbjct: 244 KDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPR 296

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 48  NPFRPPARHRHVGRWPAGDRPPLPPSPQPAMHR 146
           +P  PPAR R   R P+   PP PP P P   R
Sbjct: 561 SPSPPPARRR---RSPSPAPPPPPPPPPPRRRR 590

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>RFX1_MOUSE (P48377) DNA-binding protein RFX1|
          Length = 963

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 30  LTAPQPNPFRPPARHRHVGRWPAGDRPPLPPSPQPA 137
           L +PQP    P ++ ++V   PA   P  P +P P+
Sbjct: 52  LQSPQPQTQPPGSQKQYVAELPAAPAPSQPATPAPS 87

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>FOXD1_CHICK (Q98937) Forkhead box protein D1 (Brain factor-2) (HFH-BF-2)|
           (CBF-2) (T-14-6)
          Length = 440

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRPPLPPSPQPAMHR 146
           P P P +PPA        PA   PP PP P P   R
Sbjct: 301 PSPPPRQPPAAPAGA---PAAALPPPPPPPPPPRRR 333

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>WNT5_DROME (P28466) Protein Wnt-5 precursor (dWnt-5) (dWnt-3)|
          Length = 1004

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +3

Query: 9   DNAKTLNLTAPQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
           D AKT       PNP RP    R + ++ A   PP P  P P
Sbjct: 240 DKAKTSGAGGSPPNPKRP---QRPIHQYSAPIAPPTPKVPAP 278

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>KCTD2_MOUSE (Q8CEZ0) Potassium channel tetramerisation domain-containing|
           protein 2
          Length = 266

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 328 ATAPPPPQRSHGRGRTRAVLGTEQVERDGPARR 230
           A +PPPP+ +  R RT    G  +    GPA+R
Sbjct: 45  AASPPPPRTAGARARTSGADGRRRGRPLGPAQR 77

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>LPHN1_RAT (O88917) Latrophilin-1 precursor (Calcium-independent|
           alpha-latrotoxin receptor 1) (CIRL-1)
          Length = 1515

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 27/95 (28%), Positives = 33/95 (34%), Gaps = 16/95 (16%)
 Frame = +3

Query: 33  TAPQPNPFRPPARHRHVG-------------RWPAGDRPPLPPSPQPAMHRIXXXXXXXX 173
           TAP P+  RPPA + HV              +WPA  +  L   P P   R         
Sbjct: 458 TAPAPSTRRPPAPNLHVSPELFCEPREVRRVQWPATQQGMLVERPCPKGTR--------- 508

Query: 174 XXXXXXXXXXXXXXXMPALRL---AGPSLSTCSVP 269
                          +PAL L    GP LS C+ P
Sbjct: 509 --------GIASFQCLPALGLWNPRGPDLSNCTSP 535

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>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
           SWI2/SNF2-related protein) (Domino homolog) (hDomino)
           (CAG repeat protein 32) (Trinucleotide repeat-containing
           gene 12 protein)
          Length = 3160

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 7   MITPKP*TSPHRNPIPSGRPPATATSAGGLPETGL-RCPRRLSQ 135
           M +P P TSP R  +P G      TS G    TG+ + P++L +
Sbjct: 313 MTSPPPPTSPSRTAVPPGLSSLPLTSVG---NTGMKKVPKKLEE 353

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>ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Fragment)|
          Length = 161

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPA------GDRPPLPPSPQP 134
           PQ NP  PP      G  PA      GD P  PP+P P
Sbjct: 67  PQKNPGPPPGAPGTPGTPPAPPGKGEGDAPHPPPTPSP 104

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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
           PQP P  PPA             PP PP PQP
Sbjct: 115 PQPKPVPPPAC------------PPTPPKPQP 134

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>LPHN1_MOUSE (Q80TR1) Latrophilin-1 (Calcium-independent alpha-latrotoxin|
           receptor 1) (Lectomedin-2) (Fragment)
          Length = 1406

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 27/95 (28%), Positives = 33/95 (34%), Gaps = 16/95 (16%)
 Frame = +3

Query: 33  TAPQPNPFRPPARHRHVG-------------RWPAGDRPPLPPSPQPAMHRIXXXXXXXX 173
           TAP P+  RPPA + HV              +WPA  +  L   P P   R         
Sbjct: 393 TAPAPSTRRPPAPNLHVSPELFCEPREVRRVQWPATQQGMLVERPCPKGTR--------- 443

Query: 174 XXXXXXXXXXXXXXXMPALRL---AGPSLSTCSVP 269
                          +PAL L    GP LS C+ P
Sbjct: 444 --------GIASFQCLPALGLWNPRGPDLSNCTSP 470

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>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
           homolog
          Length = 1304

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +3

Query: 24  LNLTAPQPNPFRPPARHRHVGRWPAGDRPPLPPSPQP 134
           + L    P P  PPA     GR   G  PP PP P P
Sbjct: 513 VGLLPTPPRPPGPPAPTSPNGRPMQGGPPPPPPPPPP 549

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>ISPG_GEOSL (Q74D60) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 353

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -2

Query: 86  ADVAVAGGRPEGIGLRCGEV 27
           ADV +AGGR EG+  R GE+
Sbjct: 309 ADVGIAGGRGEGLLFRNGEI 328

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>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2158

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRW-PAGDRPPL--PPSPQPA 137
           P P P  PP     VG W P GD P    PP   PA
Sbjct: 404 PTPKPPPPPPHRGPVGNWGPPGDYPDRGGPPCKPPA 439

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>LPHN1_BOVIN (O97831) Latrophilin-1 precursor (Calcium-independent|
           alpha-latrotoxin receptor 1)
          Length = 1472

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 27/95 (28%), Positives = 33/95 (34%), Gaps = 16/95 (16%)
 Frame = +3

Query: 33  TAPQPNPFRPPARHRHVG-------------RWPAGDRPPLPPSPQPAMHRIXXXXXXXX 173
           TAP P+  RPPA + HV              +WPA  +  L   P P   R         
Sbjct: 458 TAPAPSTRRPPAPNLHVSPELFCEPREVRRVQWPATQQGMLVERPCPKGTR--------- 508

Query: 174 XXXXXXXXXXXXXXXMPALRL---AGPSLSTCSVP 269
                          +PAL L    GP LS C+ P
Sbjct: 509 --------GIASFQCLPALGLWNPRGPDLSNCTSP 535

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>HD_RAT (P51111) Huntingtin (Huntington disease protein homolog) (HD|
           protein)
          Length = 3110

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +3

Query: 39  PQPNPFRPPARHRHVGRWPAGDRPPLPPSPQPA---MHR 146
           P P P +PP         P G  PP PP P PA   +HR
Sbjct: 29  PPPQPPQPP---------PQGQPPPPPPLPGPAEEPLHR 58

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>CN044_HUMAN (Q96MY7) Protein C14orf44|
          Length = 647

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +3

Query: 27  NLTAPQPNP---FRPPARHRHVGRWPAGDRPPLP 119
           N+  PQ  P    RPP++HR V  W +    P P
Sbjct: 141 NIPRPQTQPPSGSRPPSQHRSVSSWASSITVPRP 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,597,672
Number of Sequences: 219361
Number of extensions: 523166
Number of successful extensions: 4584
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4467
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result